| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679641
Identifier: 37679641
GI number: 37679641
Start: 1492299
End: 1492958
Strand: Direct
Name: 37679641
Synonym: VV1457
Alternate gene names: NA
Gene position: 1492299-1492958 (Clockwise)
Preceding gene: 37679635
Following gene: 37679642
Centisome position: 44.49
GC content: 46.36
Gene sequence:
>660_bases ATGATGCTACATTCGCACGAGAGTACCCTACATTTAACTCAACTCAGCCGTCGCGCAATTGAACAGTTGTCGCCATCTTT TTCCAAGTTACCCCACACGGAGCATGCGGATGGCAAATTCCGTTTAAGACGCTATTCCGTCGTGTCCTTGCATCAAGGTA GCGTGATTGAGTTGGACAAGCATGACTTTGTACAGACTTCAGATATCAACCGTTTCCAAGGTGATGTGGTTCGACAGTTT TCTCCGATTGAAAAGAGCACACTAAACAGCGAAGGTTTTCGTGAAATGTGTCAGTTGTTTGCGGTGAAGAATGACCTGAG AGATGGGCAGGAAATCGAAGTGCATCAAATCCGCATTACCGCAATATATGACGAGACGCAAGTCGCCCCTGAAGGCGTGC ACCAAGATGGATTTGATCATATTGCGATTGTTGGTGTTGGCCGTAATAACATCGAAGGGGGGGATATCATGCTGTACAGT GATTTTCACTCCGAGCCGTTTTTTAGAAAAGTGTTGAATAATGGCGAAATCGCGATGCTGGCAGACAGCAAGTTGTGGCA CAACGCCAAACCCATTCGCGCTATTGAACAAGAACGAGAAGGTCATATGGATGTGTTTGTGTTGACGGCAAAAGGAATGG CACATGAATTGGTCGCCTAA
Upstream 100 bases:
>100_bases GAATTTTTTGTGGTGTAAAGTTGATCTTGCGATATTTGGCATTATTCTGTCTGAGTTGTGTTTAACAATAAAATAACAAA TGTATCAATCAAAGGAGTGA
Downstream 100 bases:
>100_bases TCAAGTTCGAGCGCAGTTTCCTGCGTTGGCACAGTATCATAACCAAAGACCAGTAACGTTTTTTGACGGGCCGGGCGGAT CTCAAGTGCCGCAATCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MMLHSHESTLHLTQLSRRAIEQLSPSFSKLPHTEHADGKFRLRRYSVVSLHQGSVIELDKHDFVQTSDINRFQGDVVRQF SPIEKSTLNSEGFREMCQLFAVKNDLRDGQEIEVHQIRITAIYDETQVAPEGVHQDGFDHIAIVGVGRNNIEGGDIMLYS DFHSEPFFRKVLNNGEIAMLADSKLWHNAKPIRAIEQEREGHMDVFVLTAKGMAHELVA
Sequences:
>Translated_219_residues MMLHSHESTLHLTQLSRRAIEQLSPSFSKLPHTEHADGKFRLRRYSVVSLHQGSVIELDKHDFVQTSDINRFQGDVVRQF SPIEKSTLNSEGFREMCQLFAVKNDLRDGQEIEVHQIRITAIYDETQVAPEGVHQDGFDHIAIVGVGRNNIEGGDIMLYS DFHSEPFFRKVLNNGEIAMLADSKLWHNAKPIRAIEQEREGHMDVFVLTAKGMAHELVA >Mature_219_residues MMLHSHESTLHLTQLSRRAIEQLSPSFSKLPHTEHADGKFRLRRYSVVSLHQGSVIELDKHDFVQTSDINRFQGDVVRQF SPIEKSTLNSEGFREMCQLFAVKNDLRDGQEIEVHQIRITAIYDETQVAPEGVHQDGFDHIAIVGVGRNNIEGGDIMLYS DFHSEPFFRKVLNNGEIAMLADSKLWHNAKPIRAIEQEREGHMDVFVLTAKGMAHELVA
Specific function: Unknown
COG id: COG4340
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24956; Mature: 24956
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLHSHESTLHLTQLSRRAIEQLSPSFSKLPHTEHADGKFRLRRYSVVSLHQGSVIELDK CCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEEEEEEEECCCCEEEECC HDFVQTSDINRFQGDVVRQFSPIEKSTLNSEGFREMCQLFAVKNDLRDGQEIEVHQIRIT CCCEECCCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE AIYDETQVAPEGVHQDGFDHIAIVGVGRNNIEGGDIMLYSDFHSEPFFRKVLNNGEIAML EEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHCCCCEEEE ADSKLWHNAKPIRAIEQEREGHMDVFVLTAKGMAHELVA ECCCHHCCCCCHHHHHHHCCCCEEEEEEECCCCHHHHCC >Mature Secondary Structure MMLHSHESTLHLTQLSRRAIEQLSPSFSKLPHTEHADGKFRLRRYSVVSLHQGSVIELDK CCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEEEEEEEECCCCEEEECC HDFVQTSDINRFQGDVVRQFSPIEKSTLNSEGFREMCQLFAVKNDLRDGQEIEVHQIRIT CCCEECCCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE AIYDETQVAPEGVHQDGFDHIAIVGVGRNNIEGGDIMLYSDFHSEPFFRKVLNNGEIAML EEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHCCCCEEEE ADSKLWHNAKPIRAIEQEREGHMDVFVLTAKGMAHELVA ECCCHHCCCCCHHHHHHHCCCCEEEEEEECCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA