Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37679634

Identifier: 37679634

GI number: 37679634

Start: 1484450

End: 1485712

Strand: Direct

Name: 37679634

Synonym: VV1450

Alternate gene names: NA

Gene position: 1484450-1485712 (Clockwise)

Preceding gene: 37679630

Following gene: 37679635

Centisome position: 44.25

GC content: 45.61

Gene sequence:

>1263_bases
ATGAACAACTTAAAGAAAATCGGTGCAGTTGGTGGTGCTATCTCATTGGCATTGTGTTGGCCATTGGCGGTGGGGCAGAT
TGGTCAAAATGTAATTGAAGATGCTGTTGCCAAGCTAAATAGTGCGCAACTGCAAGCGGAAATTGTCAAGTACGACCGAG
GTTATCGCACATCGGAAGTCACCACGCGTTACACCATTGTTGACCCTGTGTTAGTTGAGCAATTTGAAACGGACGGGCTT
CCTTTGGTTTACGAAATGCAATCGAGATTAACGCATGGGCTTACCTCGCTTGACTCGGTTTCTGACTTGATGGGGGAGCA
GGCGCTACCTCTGCATATTGAAGCCACCACACAATTGAATGGAAACACGGATTTTGTTGCCACGATTGATAGTTGGAATT
TTGTCAGTGACAGTGAAGGTGTTGCGGTTTCTACCGCACCGATGAAGCTGTCTGGCAATGCCACGGTATTGGGGGATGTC
GATTTTGTGCTTGATGTACCGTCGATTCAGTTTGACTTCAGTAGTGGTGAATCGCTGCATGTTGGCAATCTGACAGGAAA
TGGCAAGGGCAAACACAAAAACGGTTACTGGTTAGGGCAACAAGATATTCGATTGGGCGAGTTTCAAGTCGCAGATGCCT
CTGCTCAACCTTTGTTTGGCTTGTATGACGCTCAATATCTTGGTGAGACTAAGCCGGACACCAAAGGGGAGCGTTTGGCG
AGCGTGTTCACTTTTAAGTCGAAAAAGCTGTTGATGTCTGACGGCAGTGAAGTCAAAGATCTTAATCTGGACTTCTCTCT
AACGAATCTGGATATGCAATCTTTCGATAAGTTGATGGATGTGTATCAAAACGCTGCGTCTCTAACGCAAGAAGAAGTGC
AATCACTGATGCCACATATCGATACCTTGTTTGAGAAGGGCTTTGATGTGGCAGTGAAAAACTTATCTCTAAAATTGGGT
GAGGGGATATTTGAGAACACCTGGAATCTGTCAATGCCTCAAGGCACTGCGCAAGTGACGCAAGATCCAATGAAAATCAT
GACATCAATGACGGGCGATCTCAGTACCTATTTCAGTGATGAGCTGGTGGCGGAATACCCATTTATCCAAGAAGGAGTGG
ATGAGTTGATGGTGATGGAAATTCTGCAACAAGTCGAAGGTGGCTATACCTTAAAAGCCAAAATCGCTGAAGGTAAATTG
ATGTTTGATAACGGACAACAGTTCCCACTACTCGCGCTATTGATGCCTGCGCTAATGCAATAA

Upstream 100 bases:

>100_bases
TCATTCTGGTGTACTTAGCAATAGTCTGATTTATCTCAATGTTTTCACCTGAGTATAGATAGGGTAGACTCACTCAAAAC
ATTCACAAATAAGTGACATT

Downstream 100 bases:

>100_bases
TTGTGGATTCATTTGCTTAGAATAAAAAAGAGGTCGTAAGACCTCTTTTCTTGTTTTTCAACAGCGAAAAACGTGATATT
ACTTGCAGAGTTTTTATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MNNLKKIGAVGGAISLALCWPLAVGQIGQNVIEDAVAKLNSAQLQAEIVKYDRGYRTSEVTTRYTIVDPVLVEQFETDGL
PLVYEMQSRLTHGLTSLDSVSDLMGEQALPLHIEATTQLNGNTDFVATIDSWNFVSDSEGVAVSTAPMKLSGNATVLGDV
DFVLDVPSIQFDFSSGESLHVGNLTGNGKGKHKNGYWLGQQDIRLGEFQVADASAQPLFGLYDAQYLGETKPDTKGERLA
SVFTFKSKKLLMSDGSEVKDLNLDFSLTNLDMQSFDKLMDVYQNAASLTQEEVQSLMPHIDTLFEKGFDVAVKNLSLKLG
EGIFENTWNLSMPQGTAQVTQDPMKIMTSMTGDLSTYFSDELVAEYPFIQEGVDELMVMEILQQVEGGYTLKAKIAEGKL
MFDNGQQFPLLALLMPALMQ

Sequences:

>Translated_420_residues
MNNLKKIGAVGGAISLALCWPLAVGQIGQNVIEDAVAKLNSAQLQAEIVKYDRGYRTSEVTTRYTIVDPVLVEQFETDGL
PLVYEMQSRLTHGLTSLDSVSDLMGEQALPLHIEATTQLNGNTDFVATIDSWNFVSDSEGVAVSTAPMKLSGNATVLGDV
DFVLDVPSIQFDFSSGESLHVGNLTGNGKGKHKNGYWLGQQDIRLGEFQVADASAQPLFGLYDAQYLGETKPDTKGERLA
SVFTFKSKKLLMSDGSEVKDLNLDFSLTNLDMQSFDKLMDVYQNAASLTQEEVQSLMPHIDTLFEKGFDVAVKNLSLKLG
EGIFENTWNLSMPQGTAQVTQDPMKIMTSMTGDLSTYFSDELVAEYPFIQEGVDELMVMEILQQVEGGYTLKAKIAEGKL
MFDNGQQFPLLALLMPALMQ
>Mature_420_residues
MNNLKKIGAVGGAISLALCWPLAVGQIGQNVIEDAVAKLNSAQLQAEIVKYDRGYRTSEVTTRYTIVDPVLVEQFETDGL
PLVYEMQSRLTHGLTSLDSVSDLMGEQALPLHIEATTQLNGNTDFVATIDSWNFVSDSEGVAVSTAPMKLSGNATVLGDV
DFVLDVPSIQFDFSSGESLHVGNLTGNGKGKHKNGYWLGQQDIRLGEFQVADASAQPLFGLYDAQYLGETKPDTKGERLA
SVFTFKSKKLLMSDGSEVKDLNLDFSLTNLDMQSFDKLMDVYQNAASLTQEEVQSLMPHIDTLFEKGFDVAVKNLSLKLG
EGIFENTWNLSMPQGTAQVTQDPMKIMTSMTGDLSTYFSDELVAEYPFIQEGVDELMVMEILQQVEGGYTLKAKIAEGKL
MFDNGQQFPLLALLMPALMQ

Specific function: Unknown

COG id: COG5339

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46010; Mature: 46010

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLKKIGAVGGAISLALCWPLAVGQIGQNVIEDAVAKLNSAQLQAEIVKYDRGYRTSEV
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCC
TTRYTIVDPVLVEQFETDGLPLVYEMQSRLTHGLTSLDSVSDLMGEQALPLHIEATTQLN
EEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC
GNTDFVATIDSWNFVSDSEGVAVSTAPMKLSGNATVLGDVDFVLDVPSIQFDFSSGESLH
CCCCEEEEECCCCCCCCCCCEEEEECCEEECCCEEEEECCEEEEECCCEEEECCCCCEEE
VGNLTGNGKGKHKNGYWLGQQDIRLGEFQVADASAQPLFGLYDAQYLGETKPDTKGERLA
EECCCCCCCCCCCCCEEECCCCCEECCEEEECCCCCCCEEHHHHHHCCCCCCCCCHHHHH
SVFTFKSKKLLMSDGSEVKDLNLDFSLTNLDMQSFDKLMDVYQNAASLTQEEVQSLMPHI
HHHHHCCCEEEECCCCCCEEEECEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTLFEKGFDVAVKNLSLKLGEGIFENTWNLSMPQGTAQVTQDPMKIMTSMTGDLSTYFSD
HHHHHCCCCEEHHHEEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCH
ELVAEYPFIQEGVDELMVMEILQQVEGGYTLKAKIAEGKLMFDNGQQFPLLALLMPALMQ
HHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNNLKKIGAVGGAISLALCWPLAVGQIGQNVIEDAVAKLNSAQLQAEIVKYDRGYRTSEV
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCC
TTRYTIVDPVLVEQFETDGLPLVYEMQSRLTHGLTSLDSVSDLMGEQALPLHIEATTQLN
EEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC
GNTDFVATIDSWNFVSDSEGVAVSTAPMKLSGNATVLGDVDFVLDVPSIQFDFSSGESLH
CCCCEEEEECCCCCCCCCCCEEEEECCEEECCCEEEEECCEEEEECCCEEEECCCCCEEE
VGNLTGNGKGKHKNGYWLGQQDIRLGEFQVADASAQPLFGLYDAQYLGETKPDTKGERLA
EECCCCCCCCCCCCCEEECCCCCEECCEEEECCCCCCCEEHHHHHHCCCCCCCCCHHHHH
SVFTFKSKKLLMSDGSEVKDLNLDFSLTNLDMQSFDKLMDVYQNAASLTQEEVQSLMPHI
HHHHHCCCEEEECCCCCCEEEECEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTLFEKGFDVAVKNLSLKLGEGIFENTWNLSMPQGTAQVTQDPMKIMTSMTGDLSTYFSD
HHHHHCCCCEEHHHEEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCH
ELVAEYPFIQEGVDELMVMEILQQVEGGYTLKAKIAEGKLMFDNGQQFPLLALLMPALMQ
HHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA