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The map label for this gene is sxy [H]

Identifier: 37679630

GI number: 37679630

Start: 1480157

End: 1480744

Strand: Direct

Name: sxy [H]

Synonym: VV1446

Alternate gene names: 37679630

Gene position: 1480157-1480744 (Clockwise)

Preceding gene: 37679624

Following gene: 37679634

Centisome position: 44.12

GC content: 40.48

Gene sequence:

>588_bases
ATGGATATGACAGAACAAGCTTTTTTTGACTACATCAACCAATTTGGTGATTTTCAGAAACGTTCAATGTTCGGTGGTAT
CGGCCTGTTTGCGGAAGATGCCATGTTTGCATTGGTGAGTAATGGTTGCTACTACCTTCGTGGTGGAGACAGTTTGGATG
ATACTTTTTGCCAATTGGGCTGTGAGAAGTATCGTCATGTCAAAAAGCAAACCACTGCTACTGTAAATTACTACGAAGTA
TCTAATCTACTTGATAATCGAGATGGTCAGTTGGATCGTTTGGTAAAGCAGTCTATAGCGTGCTCTGTAAAGCAACGTAA
TTTCCAAAAATCATCTGCAAGTCGTCGTTTAAGAGATTTACCGAACATGCAATTAACACTTGAACGCATGGTGAAAAAAG
CAGGGATTGATGACGTTGAAACCTTTATGGAATTAGGAGCGATTGAAGTCTTTAATCGAGTTAAGCAAGCTTACGGTAAT
GACGTTGATGTCAAATTGCTATGGAAATTTGCTGGCGCGGTAGAAGGTATTCATTGGAAATTACTTCAAGAGCCCCGTCG
TAAACAACTTTTGGCAGCATGCTGCTAG

Upstream 100 bases:

>100_bases
TAAATAATTTAAATACCTTTCTCTATCATTTTCGCTTAATTATAAAATGCTGCTATCTGGTGACATAACTAATCGGGGTT
AATCTTTGAATTAGGAGTCA

Downstream 100 bases:

>100_bases
TCATCATTTTGCTCTCGAACTAAACCGTTTAGTGATAACGCTGAAATCAAATGGTGGTTTAAAGCGCATAGGTTTGGTTC
GAAGTACGCTCATTCTTGTT

Product: regulator of competence-specific genes

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MDMTEQAFFDYINQFGDFQKRSMFGGIGLFAEDAMFALVSNGCYYLRGGDSLDDTFCQLGCEKYRHVKKQTTATVNYYEV
SNLLDNRDGQLDRLVKQSIACSVKQRNFQKSSASRRLRDLPNMQLTLERMVKKAGIDDVETFMELGAIEVFNRVKQAYGN
DVDVKLLWKFAGAVEGIHWKLLQEPRRKQLLAACC

Sequences:

>Translated_195_residues
MDMTEQAFFDYINQFGDFQKRSMFGGIGLFAEDAMFALVSNGCYYLRGGDSLDDTFCQLGCEKYRHVKKQTTATVNYYEV
SNLLDNRDGQLDRLVKQSIACSVKQRNFQKSSASRRLRDLPNMQLTLERMVKKAGIDDVETFMELGAIEVFNRVKQAYGN
DVDVKLLWKFAGAVEGIHWKLLQEPRRKQLLAACC
>Mature_195_residues
MDMTEQAFFDYINQFGDFQKRSMFGGIGLFAEDAMFALVSNGCYYLRGGDSLDDTFCQLGCEKYRHVKKQTTATVNYYEV
SNLLDNRDGQLDRLVKQSIACSVKQRNFQKSSASRRLRDLPNMQLTLERMVKKAGIDDVETFMELGAIEVFNRVKQAYGN
DVDVKLLWKFAGAVEGIHWKLLQEPRRKQLLAACC

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae DNA transformation protein tfoX [H]

Homologues:

Organism=Escherichia coli, GI1787193, Length=182, Percent_Identity=33.5164835164835, Blast_Score=91, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007077
- InterPro:   IPR007076 [H]

Pfam domain/function: PF04994 TfoX_C; PF04993 TfoX_N [H]

EC number: NA

Molecular weight: Translated: 22356; Mature: 22356

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMTEQAFFDYINQFGDFQKRSMFGGIGLFAEDAMFALVSNGCYYLRGGDSLDDTFCQLG
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHH
CEKYRHVKKQTTATVNYYEVSNLLDNRDGQLDRLVKQSIACSVKQRNFQKSSASRRLRDL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PNMQLTLERMVKKAGIDDVETFMELGAIEVFNRVKQAYGNDVDVKLLWKFAGAVEGIHWK
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LLQEPRRKQLLAACC
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MDMTEQAFFDYINQFGDFQKRSMFGGIGLFAEDAMFALVSNGCYYLRGGDSLDDTFCQLG
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHH
CEKYRHVKKQTTATVNYYEVSNLLDNRDGQLDRLVKQSIACSVKQRNFQKSSASRRLRDL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PNMQLTLERMVKKAGIDDVETFMELGAIEVFNRVKQAYGNDVDVKLLWKFAGAVEGIHWK
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LLQEPRRKQLLAACC
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]