| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is dhaT [H]
Identifier: 37679624
GI number: 37679624
Start: 1472662
End: 1473909
Strand: Direct
Name: dhaT [H]
Synonym: VV1440
Alternate gene names: 37679624
Gene position: 1472662-1473909 (Clockwise)
Preceding gene: 37679621
Following gene: 37679630
Centisome position: 43.9
GC content: 48.32
Gene sequence:
>1248_bases ATGTTCCAGTTTATGACCGCAACACGAATTATTTTTGGCGAAGGCGCGTTACAGTCCTCACTCTCTATCCTCAGTCAGTT TGGTTACAGTGCTTTATTGGTCACAGGAAAAGATCTTGCGAGGGCGATGCCCATTATTGGCTATTTCAAATCACAGAATA TTCGTTATCAGCATGTCGCGATCAGTGGTGAACCTAATATTACTATGGTGGAGGAAACGGCCGTCATAGGTAGAAAGTTT AAGCCAGACATGGTTGTCGCTATTGGTGGGGGGAGTGTTATTGATATGGGTAAAGCGCTGGCTGCGATCATCCCCAATCA AGGCGATGTGTACGACTACGTCGAAGTGGTGGGCAGAAATGTGCCATTAAAAACACAACCTATACACTTTATCGCCATTC CGACGACGGCCAGCACTGGATCGGAAGTGACGCGAAATGCGGTATTAAAATCGGGCCAGGATAAAGTGAAAGTGAGTCTG CGCAGTCCGGATATGCTTGCCGATGTGGCGATTGTCGACCCGACACTCACCTATGGTACTGATGCCTATACATCCGGCCG TGGCGCGATGGATGCCTTTACCCATTTAATGGAAGCCTATGTCTGTGGTGAGCCGAATCCGCTGACGGATATGATATGTG AAGAAGGGCTACGACGATTAAGTCACTCTATCATTCCGGGTTGCTTACAAGATGATTACAAAGCGCGCTCAGACTTGGCA TTTTCCGCAATGCTCGGTGGAATGGCGATCACCAATGCTAAATTAGGTGCGGCTCATGGTTTAGCTTCAGCCCTTGGTGG AAAGCTGGATGCACCACACAGTGTGATCACTGCGCAGCTCGCGCCACATGTGATGAACGAAAATATTATGGCGGCGCGAG AAGCGGGCAGAGCCGACGTGCTCACTCGTTATAAGTCTTTGGCTCGATTGGTCACAAAAAATGGTGACGCTAGTGAGTTA GAAGGCGTGGAATGGGTTAAAGGTGTCTTGGATAAGTTGCAGCTTCCTGAGCTGAGTCAGTTTGGTGTCTGTTCGACATC GTTTGATGCGGTCGCGGAAGATGCCTTGCGCTCAGTTGCGATTAAAGGAAACCCTTTGCCACTGACTAAAGCGAGGTTGA TCTATATATTGGAGCAAGTTTGTCAGTGCCGTTTGCGTTCTGAGCAAACCCAGCAAGAAGCCACTGGATGCGCACAGTTT ATCGAGAGTGAAGATTACAATCTCGAAATGGGGAATGAGATAAAATAA
Upstream 100 bases:
>100_bases CAAATTGCACTTGGTCAATTTTTTTACGTACAAAGATAGGCAAAGTGAAACGACACCTAAGATTTTACTCGTAGTTTCTA ATATTAAGAGGCAATGCAGT
Downstream 100 bases:
>100_bases CGGAGCCGTCAGGCTCCGTGATTCGTATTGAGAGTATCGCTTTCAACCAGAATTGGCTTGCGATTAGAAATGCGTAAGTT TGTCGTATCGGCTGTCTTTC
Product: alcohol dehydrogenase, class IV
Products: NA
Alternate protein names: 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase [H]
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MFQFMTATRIIFGEGALQSSLSILSQFGYSALLVTGKDLARAMPIIGYFKSQNIRYQHVAISGEPNITMVEETAVIGRKF KPDMVVAIGGGSVIDMGKALAAIIPNQGDVYDYVEVVGRNVPLKTQPIHFIAIPTTASTGSEVTRNAVLKSGQDKVKVSL RSPDMLADVAIVDPTLTYGTDAYTSGRGAMDAFTHLMEAYVCGEPNPLTDMICEEGLRRLSHSIIPGCLQDDYKARSDLA FSAMLGGMAITNAKLGAAHGLASALGGKLDAPHSVITAQLAPHVMNENIMAAREAGRADVLTRYKSLARLVTKNGDASEL EGVEWVKGVLDKLQLPELSQFGVCSTSFDAVAEDALRSVAIKGNPLPLTKARLIYILEQVCQCRLRSEQTQQEATGCAQF IESEDYNLEMGNEIK
Sequences:
>Translated_415_residues MFQFMTATRIIFGEGALQSSLSILSQFGYSALLVTGKDLARAMPIIGYFKSQNIRYQHVAISGEPNITMVEETAVIGRKF KPDMVVAIGGGSVIDMGKALAAIIPNQGDVYDYVEVVGRNVPLKTQPIHFIAIPTTASTGSEVTRNAVLKSGQDKVKVSL RSPDMLADVAIVDPTLTYGTDAYTSGRGAMDAFTHLMEAYVCGEPNPLTDMICEEGLRRLSHSIIPGCLQDDYKARSDLA FSAMLGGMAITNAKLGAAHGLASALGGKLDAPHSVITAQLAPHVMNENIMAAREAGRADVLTRYKSLARLVTKNGDASEL EGVEWVKGVLDKLQLPELSQFGVCSTSFDAVAEDALRSVAIKGNPLPLTKARLIYILEQVCQCRLRSEQTQQEATGCAQF IESEDYNLEMGNEIK >Mature_415_residues MFQFMTATRIIFGEGALQSSLSILSQFGYSALLVTGKDLARAMPIIGYFKSQNIRYQHVAISGEPNITMVEETAVIGRKF KPDMVVAIGGGSVIDMGKALAAIIPNQGDVYDYVEVVGRNVPLKTQPIHFIAIPTTASTGSEVTRNAVLKSGQDKVKVSL RSPDMLADVAIVDPTLTYGTDAYTSGRGAMDAFTHLMEAYVCGEPNPLTDMICEEGLRRLSHSIIPGCLQDDYKARSDLA FSAMLGGMAITNAKLGAAHGLASALGGKLDAPHSVITAQLAPHVMNENIMAAREAGRADVLTRYKSLARLVTKNGDASEL EGVEWVKGVLDKLQLPELSQFGVCSTSFDAVAEDALRSVAIKGNPLPLTKARLIYILEQVCQCRLRSEQTQQEATGCAQF IESEDYNLEMGNEIK
Specific function: Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI48994951, Length=387, Percent_Identity=28.1653746770026, Blast_Score=129, Evalue=5e-31, Organism=Escherichia coli, GI87082107, Length=309, Percent_Identity=31.0679611650485, Blast_Score=123, Evalue=3e-29, Organism=Escherichia coli, GI1789163, Length=378, Percent_Identity=28.8359788359788, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1787493, Length=405, Percent_Identity=27.1604938271605, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1789386, Length=378, Percent_Identity=24.3386243386243, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17537053, Length=287, Percent_Identity=25.4355400696864, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321181, Length=381, Percent_Identity=32.2834645669291, Blast_Score=159, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.202 [H]
Molecular weight: Translated: 44669; Mature: 44669
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQFMTATRIIFGEGALQSSLSILSQFGYSALLVTGKDLARAMPIIGYFKSQNIRYQHVA CCCHHHHHEEEECCCHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHEECCCCEEEEEEE ISGEPNITMVEETAVIGRKFKPDMVVAIGGGSVIDMGKALAAIIPNQGDVYDYVEVVGRN ECCCCCEEEEEHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCC VPLKTQPIHFIAIPTTASTGSEVTRNAVLKSGQDKVKVSLRSPDMLADVAIVDPTLTYGT CCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHEEEEEECCCCCCCC DAYTSGRGAMDAFTHLMEAYVCGEPNPLTDMICEEGLRRLSHSIIPGCLQDDYKARSDLA CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FSAMLGGMAITNAKLGAAHGLASALGGKLDAPHSVITAQLAPHVMNENIMAAREAGRADV HHHHHCCHHEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHH LTRYKSLARLVTKNGDASELEGVEWVKGVLDKLQLPELSQFGVCSTSFDAVAEDALRSVA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEE IKGNPLPLTKARLIYILEQVCQCRLRSEQTQQEATGCAQFIESEDYNLEMGNEIK ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MFQFMTATRIIFGEGALQSSLSILSQFGYSALLVTGKDLARAMPIIGYFKSQNIRYQHVA CCCHHHHHEEEECCCHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHEECCCCEEEEEEE ISGEPNITMVEETAVIGRKFKPDMVVAIGGGSVIDMGKALAAIIPNQGDVYDYVEVVGRN ECCCCCEEEEEHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCC VPLKTQPIHFIAIPTTASTGSEVTRNAVLKSGQDKVKVSLRSPDMLADVAIVDPTLTYGT CCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHEEEEEECCCCCCCC DAYTSGRGAMDAFTHLMEAYVCGEPNPLTDMICEEGLRRLSHSIIPGCLQDDYKARSDLA CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FSAMLGGMAITNAKLGAAHGLASALGGKLDAPHSVITAQLAPHVMNENIMAAREAGRADV HHHHHCCHHEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHH LTRYKSLARLVTKNGDASELEGVEWVKGVLDKLQLPELSQFGVCSTSFDAVAEDALRSVA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEE IKGNPLPLTKARLIYILEQVCQCRLRSEQTQQEATGCAQFIESEDYNLEMGNEIK ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7721705 [H]