| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679621
Identifier: 37679621
GI number: 37679621
Start: 1468955
End: 1470157
Strand: Direct
Name: 37679621
Synonym: VV1437
Alternate gene names: NA
Gene position: 1468955-1470157 (Clockwise)
Preceding gene: 37679620
Following gene: 37679624
Centisome position: 43.79
GC content: 46.13
Gene sequence:
>1203_bases ATGATCATCAAACCTAAAATTCGTGGATTTATCTGTACTACAACGCACCCAGTGGGTTGTGAAGCTAATGTAAAAGAACA AATTGCTTACACCAAAGCACAAGGCCCTATCAAAAACGCACCAAAACGCGTACTTGTTGTGGGTGCATCCAGTGGCTACG GCTTATCTTCTCGTATTGCAGCTGCTTTCGGTGGTGGTGCGGCCACTATCGGTGTTTTCTTCGAAAAAGAAGGCTCAGAG AAGAAACCAGGCACCGCAGGTTTTTACAATGCCGCAGCATTTGAGAAACTGGCTCGTGAAGAAGGTTTGTACGCAAAAAG CTTAAACGGCGATGCGTTTTCTAACGAAGCAAAACAAAAAACAATCGACCTAATCAAAGAAGATTTGGGTCAAGTGGATA TGGTTGTTTACTCTTTGGCTTCGCCTGTTCGTAAGTTACCAGAAACGGGCGAGCTTATTCGTTCAGCGCTAAAACCTATT GGCCAAACTTACACCTCAACGGCGGTTGATACCAACAAAGACATCATTATTGAAGCCAGTGTGGAACCTGCAACTGAGCA GGAAATCCAAGACACGGTAACGGTTATGGGTGGTGAAGATTGGGAACTTTGGATTAATGCGCTAGCAGAAGCGGGTGTGC TGGCAGAAGGTTGCAAAACCGTTGCTTACAGCTACATCGGTACTGAATTAACCTGGCCTATCTACTGGGATGGTGCGCTG GGTAAAGCGAAAATGGATCTCGATCGCGCAGCGTCTGCACTGAACGATAAACTCTCTGCCACTGGCGGTAGTGCAAATGT TGCAGTGCTTAAGTCTGTTGTGACTCAAGCAAGTTCAGCGATTCCAGTGATGCCTCTGTATATCGCGATGGTCTTCAAAA AGATGCGTGAAGAAGGCGTTCACGAAGGTTGTATGGAACAGATCTACCGCATGTTTAGCCAGCGTCTGTATAAAGAAGAT GGCAGTGCGGCAGAAGTGGACGAGAAAAACCGTCTTCGCCTCGACGATTGGGAATTGCGCGATGATATTCAAGAGCATTG CCGTAACCTATGGCCACAAATCACCACTGAGAATCTAAAAGAGCTGACTGACTACGTTGAGTACAAAGAAGAGTTCTTGA AGCTATTTGGTTTCGGCATTGATGGCGTAGATTACGAAGCAGACGTTAACCCAGACGTTGCAACGGATTTTATTGCTATC TAG
Upstream 100 bases:
>100_bases AGCTCCAACCACTTGCATTTTCAGCGCATTTTTACAGAAATTAGATGCGAATAGGCGACGAACCTTTTATCCTTACACAG TTTTTTAAAGGAAGTTGAAT
Downstream 100 bases:
>100_bases TTTCTATACCGTAGCACAGCATCAAACTGGGTTGTGCTACCGTCAACGAAACAGACAAATAGAATGAAAAAGGCGCTTGT AAGCGCCTTTTTTGTATCCA
Product: trans-2-enoyl-CoA reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MIIKPKIRGFICTTTHPVGCEANVKEQIAYTKAQGPIKNAPKRVLVVGASSGYGLSSRIAAAFGGGAATIGVFFEKEGSE KKPGTAGFYNAAAFEKLAREEGLYAKSLNGDAFSNEAKQKTIDLIKEDLGQVDMVVYSLASPVRKLPETGELIRSALKPI GQTYTSTAVDTNKDIIIEASVEPATEQEIQDTVTVMGGEDWELWINALAEAGVLAEGCKTVAYSYIGTELTWPIYWDGAL GKAKMDLDRAASALNDKLSATGGSANVAVLKSVVTQASSAIPVMPLYIAMVFKKMREEGVHEGCMEQIYRMFSQRLYKED GSAAEVDEKNRLRLDDWELRDDIQEHCRNLWPQITTENLKELTDYVEYKEEFLKLFGFGIDGVDYEADVNPDVATDFIAI
Sequences:
>Translated_400_residues MIIKPKIRGFICTTTHPVGCEANVKEQIAYTKAQGPIKNAPKRVLVVGASSGYGLSSRIAAAFGGGAATIGVFFEKEGSE KKPGTAGFYNAAAFEKLAREEGLYAKSLNGDAFSNEAKQKTIDLIKEDLGQVDMVVYSLASPVRKLPETGELIRSALKPI GQTYTSTAVDTNKDIIIEASVEPATEQEIQDTVTVMGGEDWELWINALAEAGVLAEGCKTVAYSYIGTELTWPIYWDGAL GKAKMDLDRAASALNDKLSATGGSANVAVLKSVVTQASSAIPVMPLYIAMVFKKMREEGVHEGCMEQIYRMFSQRLYKED GSAAEVDEKNRLRLDDWELRDDIQEHCRNLWPQITTENLKELTDYVEYKEEFLKLFGFGIDGVDYEADVNPDVATDFIAI >Mature_400_residues MIIKPKIRGFICTTTHPVGCEANVKEQIAYTKAQGPIKNAPKRVLVVGASSGYGLSSRIAAAFGGGAATIGVFFEKEGSE KKPGTAGFYNAAAFEKLAREEGLYAKSLNGDAFSNEAKQKTIDLIKEDLGQVDMVVYSLASPVRKLPETGELIRSALKPI GQTYTSTAVDTNKDIIIEASVEPATEQEIQDTVTVMGGEDWELWINALAEAGVLAEGCKTVAYSYIGTELTWPIYWDGAL GKAKMDLDRAASALNDKLSATGGSANVAVLKSVVTQASSAIPVMPLYIAMVFKKMREEGVHEGCMEQIYRMFSQRLYKED GSAAEVDEKNRLRLDDWELRDDIQEHCRNLWPQITTENLKELTDYVEYKEEFLKLFGFGIDGVDYEADVNPDVATDFIAI
Specific function: Probable reductase [H]
COG id: COG3007
COG function: function code S; Uncharacterized paraquat-inducible protein B
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TER reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR010758 [H]
Pfam domain/function: PF07055 scADH [H]
EC number: NA
Molecular weight: Translated: 43790; Mature: 43790
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIKPKIRGFICTTTHPVGCEANVKEQIAYTKAQGPIKNAPKRVLVVGASSGYGLSSRIA CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHH AAFGGGAATIGVFFEKEGSEKKPGTAGFYNAAAFEKLAREEGLYAKSLNGDAFSNEAKQK HHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHCHHHHHH TIDLIKEDLGQVDMVVYSLASPVRKLPETGELIRSALKPIGQTYTSTAVDTNKDIIIEAS HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC VEPATEQEIQDTVTVMGGEDWELWINALAEAGVLAEGCKTVAYSYIGTELTWPIYWDGAL CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCC GKAKMDLDRAASALNDKLSATGGSANVAVLKSVVTQASSAIPVMPLYIAMVFKKMREEGV CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCH HEGCMEQIYRMFSQRLYKEDGSAAEVDEKNRLRLDDWELRDDIQEHCRNLWPQITTENLK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH ELTDYVEYKEEFLKLFGFGIDGVDYEADVNPDVATDFIAI HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MIIKPKIRGFICTTTHPVGCEANVKEQIAYTKAQGPIKNAPKRVLVVGASSGYGLSSRIA CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHH AAFGGGAATIGVFFEKEGSEKKPGTAGFYNAAAFEKLAREEGLYAKSLNGDAFSNEAKQK HHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHCHHHHHH TIDLIKEDLGQVDMVVYSLASPVRKLPETGELIRSALKPIGQTYTSTAVDTNKDIIIEAS HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC VEPATEQEIQDTVTVMGGEDWELWINALAEAGVLAEGCKTVAYSYIGTELTWPIYWDGAL CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCC GKAKMDLDRAASALNDKLSATGGSANVAVLKSVVTQASSAIPVMPLYIAMVFKKMREEGV CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCH HEGCMEQIYRMFSQRLYKEDGSAAEVDEKNRLRLDDWELRDDIQEHCRNLWPQITTENLK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH ELTDYVEYKEEFLKLFGFGIDGVDYEADVNPDVATDFIAI HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]