| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is hisC [H]
Identifier: 37679536
GI number: 37679536
Start: 1378047
End: 1379087
Strand: Direct
Name: hisC [H]
Synonym: VV1352
Alternate gene names: 37679536
Gene position: 1378047-1379087 (Clockwise)
Preceding gene: 37679535
Following gene: 37679537
Centisome position: 41.08
GC content: 46.59
Gene sequence:
>1041_bases ATGGAAAAGCTTGCTCGTAAAAGTGTACAGAAACTGACGCCTTATCTTTCGGCGCGCCGCATCGGTGGAACCGGCGATGT TTGGTTGAATGCCAATGAATCGCCATTTGACAATGAATACCGCACAAACTTTGCGCGCTTGAACCGTTACAGTGATTGTC AGCCGAAAGCATTGATTGCAGCCTACGCTGCCTATGCAGGTGTTAAACCAGAACAAACTCTTACATCGCGTGGCGCGGAT GAGGGTATCGAATTGCTGATTCGCGCTTTCTGCGAACCAAATGAAGATGCCATTCTTTACTGTCCTCCTACGTATGGCAT GTATTCTGTGAGCGCTGAAACCATTGGCGTTGAGCGTAAAACCGTACCGCTGACAGAGGATTGGCAATTAGACCTTTCAG GTATTGAAGCCAATTTGGACAAGGTTAAGTTGGTCTTTGTTTGTTCACCAAACAATCCAACAGGCAACTTAGTGAAGCGA GAAGACATCATCGCCTTGCTAGAGATGACAAAAGACAGAGCCATCGTTGTGATGGATGAAGCGTATATCGATTTTTGTCC AGAGGCCTCAACTGTCGATTTACTTGCGCAGTACTCAAACCTTGCGATTTTGCGTACTTTGTCGAAAGCCTTTGCATTAG CTGGCTTGCGTTGTGGATTCACACTTGCGAATGAAGAGCTGATTAATGTACTTCTAAAAGTTATCGCGCCCTATCCGGTA CCAGTGCCTGTCGCAGAAATTGCGACACAAGCATTGTCAGAAGCTGGCTTGGCTCGTGCTAAGTTCCAAGTGCTCGACCT CAATGCAAACCGTGCCTATTTGCAAGTGGGATTATCAATGATCGCAGGTTTAGAAGTGTTTGAAGGGTGGGGCAATTATC TGCTGGTGAAATTCCCTAATGGCGACGAGCTATTTAAGGCGGCTTGGGAGTCCGGCATCATCTTGCGAAACTCGCCAATC AAAGATTGCGTAAGAATCAGTGTTGGCAGCCGAGATGAGTGTGAGAAAACTCTGGGTTTCATTAGAAACTACTACTCATA A
Upstream 100 bases:
>100_bases ACGGTGGTGACGATGGCGGAAGCAGAAGGATTGGACGCACACAAACGAGCGGTCACAATTCGTGTTGAAAAATTAACTGC GCGTAGCTAAGGAAAAGACG
Downstream 100 bases:
>100_bases GTAGAGAAAGAATGAATTGCATTCGCTAAACAGCGAGAGCGCCAAAAGAATAGCAATAAGGAAGTTCGAGTGAGCAAACA ACAAAAAATCCTTTTTATCG
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MEKLARKSVQKLTPYLSARRIGGTGDVWLNANESPFDNEYRTNFARLNRYSDCQPKALIAAYAAYAGVKPEQTLTSRGAD EGIELLIRAFCEPNEDAILYCPPTYGMYSVSAETIGVERKTVPLTEDWQLDLSGIEANLDKVKLVFVCSPNNPTGNLVKR EDIIALLEMTKDRAIVVMDEAYIDFCPEASTVDLLAQYSNLAILRTLSKAFALAGLRCGFTLANEELINVLLKVIAPYPV PVPVAEIATQALSEAGLARAKFQVLDLNANRAYLQVGLSMIAGLEVFEGWGNYLLVKFPNGDELFKAAWESGIILRNSPI KDCVRISVGSRDECEKTLGFIRNYYS
Sequences:
>Translated_346_residues MEKLARKSVQKLTPYLSARRIGGTGDVWLNANESPFDNEYRTNFARLNRYSDCQPKALIAAYAAYAGVKPEQTLTSRGAD EGIELLIRAFCEPNEDAILYCPPTYGMYSVSAETIGVERKTVPLTEDWQLDLSGIEANLDKVKLVFVCSPNNPTGNLVKR EDIIALLEMTKDRAIVVMDEAYIDFCPEASTVDLLAQYSNLAILRTLSKAFALAGLRCGFTLANEELINVLLKVIAPYPV PVPVAEIATQALSEAGLARAKFQVLDLNANRAYLQVGLSMIAGLEVFEGWGNYLLVKFPNGDELFKAAWESGIILRNSPI KDCVRISVGSRDECEKTLGFIRNYYS >Mature_346_residues MEKLARKSVQKLTPYLSARRIGGTGDVWLNANESPFDNEYRTNFARLNRYSDCQPKALIAAYAAYAGVKPEQTLTSRGAD EGIELLIRAFCEPNEDAILYCPPTYGMYSVSAETIGVERKTVPLTEDWQLDLSGIEANLDKVKLVFVCSPNNPTGNLVKR EDIIALLEMTKDRAIVVMDEAYIDFCPEASTVDLLAQYSNLAILRTLSKAFALAGLRCGFTLANEELINVLLKVIAPYPV PVPVAEIATQALSEAGLARAKFQVLDLNANRAYLQVGLSMIAGLEVFEGWGNYLLVKFPNGDELFKAAWESGIILRNSPI KDCVRISVGSRDECEKTLGFIRNYYS
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=344, Percent_Identity=61.046511627907, Blast_Score=425, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6322075, Length=382, Percent_Identity=31.9371727748691, Blast_Score=157, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 38257; Mature: 38257
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLARKSVQKLTPYLSARRIGGTGDVWLNANESPFDNEYRTNFARLNRYSDCQPKALIA CCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHH AYAAYAGVKPEQTLTSRGADEGIELLIRAFCEPNEDAILYCPPTYGMYSVSAETIGVERK HHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECHHHCCCCCC TVPLTEDWQLDLSGIEANLDKVKLVFVCSPNNPTGNLVKREDIIALLEMTKDRAIVVMDE CCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEC AYIDFCPEASTVDLLAQYSNLAILRTLSKAFALAGLRCGFTLANEELINVLLKVIAPYPV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCCC PVPVAEIATQALSEAGLARAKFQVLDLNANRAYLQVGLSMIAGLEVFEGWGNYLLVKFPN CCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECC GDELFKAAWESGIILRNSPIKDCVRISVGSRDECEKTLGFIRNYYS CHHHHHHHHHCCEEEECCCHHHHHEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKLARKSVQKLTPYLSARRIGGTGDVWLNANESPFDNEYRTNFARLNRYSDCQPKALIA CCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHH AYAAYAGVKPEQTLTSRGADEGIELLIRAFCEPNEDAILYCPPTYGMYSVSAETIGVERK HHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECHHHCCCCCC TVPLTEDWQLDLSGIEANLDKVKLVFVCSPNNPTGNLVKREDIIALLEMTKDRAIVVMDE CCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEC AYIDFCPEASTVDLLAQYSNLAILRTLSKAFALAGLRCGFTLANEELINVLLKVIAPYPV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCCC PVPVAEIATQALSEAGLARAKFQVLDLNANRAYLQVGLSMIAGLEVFEGWGNYLLVKFPN CCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECC GDELFKAAWESGIILRNSPIKDCVRISVGSRDECEKTLGFIRNYYS CHHHHHHHHHCCEEEECCCHHHHHEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA