| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is hisD
Identifier: 37679535
GI number: 37679535
Start: 1376741
End: 1378036
Strand: Direct
Name: hisD
Synonym: VV1351
Alternate gene names: 37679535
Gene position: 1376741-1378036 (Clockwise)
Preceding gene: 37679534
Following gene: 37679536
Centisome position: 41.04
GC content: 48.23
Gene sequence:
>1296_bases ATGAGAACGGTTGTTTGGCAATCTCTTAGTGAGACGCAACAAGACGCTATTTTGGAACGTCCAGCGATAACAGAAGGTGC GAATATTACCGCTGCAGTGGCAGAAGTGATTGCGAAAGTCAGAGCAGAAGGCGATGCGGCACTGTTCGAACTCACGGAAA AGTTTGATCGCATTAAACCAGAATCGATTCGAGTGACTGAACAAGAAATCGAGGAGGCTTCTGCTCGCTTAACTGCAAAA ATGAAGCAAGCGCTTGAGCAGGCTTACGCCAATATCGCGAAGTTCCACAATGCCCAGAAACCGACGCCAATTAAAGTCGA AACACAACCGGGTGTGGTGTGTGAACAAGTCACTCGCCCGATACAAAAAGTGGGTTTATACATTCCTGGTGGCAGTGCAC CGCTGCCTTCAACGGTATTGATGTTGGGTGTTCCTGCGCAAATCGCGGGTTGCCGCAAAGTGGTTTTATGTTCACCACCA CCGATTGCCGATGAGATTCTCTATGTGGCAAAGCTTTGTAATATTGATGAAGTTTACAATGTTGGCGGTGGGCAAGCGGT AGCGGCGATGGCCTATGGGACAGAAAGTGTCACTAAGGTGGACAAAATATTTGGTCCTGGCAATGCGTATGTCACAGAAG CAAAACGCCAAGTGAGCAATGACTTTCGTGGTGCCGCCATTGATATGCCCGCTGGGCCATCAGAAGTGTTGGTGATTGCT GATGAAACTGCAGATGCCGATTTTATCGCCGCCGATTTACTTAGCCAAGCCGAGCACGGACCAGACTCGCAAGTGGTTTT AGTGACGCCATCTGTCTTGATTGCAGATCAAGTAACGGATGCTGTACAGAAACAGTTGAAGCAGTTATCACGCGCCTCTA TTGCTGAAAAAGCACTGGCGTCGAGCTTGATTATTATTGCTGACTCCTTAACCCAAGCGGTTTCTATTTCAAATTATTAC GGTCCAGAGCATTTAATTGTTCAGACCAAAAATCCTCGAGAGTTGTTGCCATTGCTGGATAACGCAGGTTCCATTTTCTT GGGTGATTGGTCGCCTGAATCGGCGGGTGATTATGCGTCAGGAACCAACCACGTGTTGCCAACGTATGGGTACACCCGTA CCTACTCAAGCCTTGGATTGGCTGATTTTTCTAAACGCATGACGGTACAAGAACTCTCTGCGGAAGGGCTGAAAAACCTT GCTCCAACGGTGGTGACGATGGCGGAAGCAGAAGGATTGGACGCACACAAACGAGCGGTCACAATTCGTGTTGAAAAATT AACTGCGCGTAGCTAA
Upstream 100 bases:
>100_bases GTACAGAAAACCTATTCTGGGAAACGATGGAACAGCTCAAAGAACTTGGCGCGAGCTCTATTCTTGTTTTACCAATTGAA AAAATGATGGAGTAAGGCTC
Downstream 100 bases:
>100_bases GGAAAAGACGATGGAAAAGCTTGCTCGTAAAAGTGTACAGAAACTGACGCCTTATCTTTCGGCGCGCCGCATCGGTGGAA CCGGCGATGTTTGGTTGAAT
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MRTVVWQSLSETQQDAILERPAITEGANITAAVAEVIAKVRAEGDAALFELTEKFDRIKPESIRVTEQEIEEASARLTAK MKQALEQAYANIAKFHNAQKPTPIKVETQPGVVCEQVTRPIQKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPP PIADEILYVAKLCNIDEVYNVGGGQAVAAMAYGTESVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA DETADADFIAADLLSQAEHGPDSQVVLVTPSVLIADQVTDAVQKQLKQLSRASIAEKALASSLIIIADSLTQAVSISNYY GPEHLIVQTKNPRELLPLLDNAGSIFLGDWSPESAGDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTVQELSAEGLKNL APTVVTMAEAEGLDAHKRAVTIRVEKLTARS
Sequences:
>Translated_431_residues MRTVVWQSLSETQQDAILERPAITEGANITAAVAEVIAKVRAEGDAALFELTEKFDRIKPESIRVTEQEIEEASARLTAK MKQALEQAYANIAKFHNAQKPTPIKVETQPGVVCEQVTRPIQKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPP PIADEILYVAKLCNIDEVYNVGGGQAVAAMAYGTESVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA DETADADFIAADLLSQAEHGPDSQVVLVTPSVLIADQVTDAVQKQLKQLSRASIAEKALASSLIIIADSLTQAVSISNYY GPEHLIVQTKNPRELLPLLDNAGSIFLGDWSPESAGDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTVQELSAEGLKNL APTVVTMAEAEGLDAHKRAVTIRVEKLTARS >Mature_431_residues MRTVVWQSLSETQQDAILERPAITEGANITAAVAEVIAKVRAEGDAALFELTEKFDRIKPESIRVTEQEIEEASARLTAK MKQALEQAYANIAKFHNAQKPTPIKVETQPGVVCEQVTRPIQKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPP PIADEILYVAKLCNIDEVYNVGGGQAVAAMAYGTESVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA DETADADFIAADLLSQAEHGPDSQVVLVTPSVLIADQVTDAVQKQLKQLSRASIAEKALASSLIIIADSLTQAVSISNYY GPEHLIVQTKNPRELLPLLDNAGSIFLGDWSPESAGDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTVQELSAEGLKNL APTVVTMAEAEGLDAHKRAVTIRVEKLTARS
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=422, Percent_Identity=64.218009478673, Blast_Score=558, Evalue=1e-160, Organism=Saccharomyces cerevisiae, GI6319819, Length=419, Percent_Identity=52.2673031026253, Blast_Score=419, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46069; Mature: 46069
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTVVWQSLSETQQDAILERPAITEGANITAAVAEVIAKVRAEGDAALFELTEKFDRIKP CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC ESIRVTEQEIEEASARLTAKMKQALEQAYANIAKFHNAQKPTPIKVETQPGVVCEQVTRP CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHH IQKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPPIADEILYVAKLCNIDEVYN HHHCCEEECCCCCCCCCEEEEECCCHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHC VGGGQAVAAMAYGTESVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA CCCCCEEEEEHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEE DETADADFIAADLLSQAEHGPDSQVVLVTPSVLIADQVTDAVQKQLKQLSRASIAEKALA ECCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLIIIADSLTQAVSISNYYGPEHLIVQTKNPRELLPLLDNAGSIFLGDWSPESAGDYAS HHHHEEEHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCCCCCC GTNHVLPTYGYTRTYSSLGLADFSKRMTVQELSAEGLKNLAPTVVTMAEAEGLDAHKRAV CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHCCCCCCHHEEE TIRVEKLTARS EEEEECCCCCC >Mature Secondary Structure MRTVVWQSLSETQQDAILERPAITEGANITAAVAEVIAKVRAEGDAALFELTEKFDRIKP CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC ESIRVTEQEIEEASARLTAKMKQALEQAYANIAKFHNAQKPTPIKVETQPGVVCEQVTRP CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHH IQKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPPIADEILYVAKLCNIDEVYN HHHCCEEECCCCCCCCCEEEEECCCHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHC VGGGQAVAAMAYGTESVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA CCCCCEEEEEHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEE DETADADFIAADLLSQAEHGPDSQVVLVTPSVLIADQVTDAVQKQLKQLSRASIAEKALA ECCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLIIIADSLTQAVSISNYYGPEHLIVQTKNPRELLPLLDNAGSIFLGDWSPESAGDYAS HHHHEEEHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCCCCCC GTNHVLPTYGYTRTYSSLGLADFSKRMTVQELSAEGLKNLAPTVVTMAEAEGLDAHKRAV CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHCCCCCCHHEEE TIRVEKLTARS EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]