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The map label for this gene is yedS [C]

Identifier: 37679167

GI number: 37679167

Start: 983317

End: 984339

Strand: Direct

Name: yedS [C]

Synonym: VV0983

Alternate gene names: 37679167

Gene position: 983317-984339 (Clockwise)

Preceding gene: 37679166

Following gene: 37679168

Centisome position: 29.31

GC content: 44.28

Gene sequence:

>1023_bases
ATGGACAAAATGTTTAAACGTACTCTTCTAGGCGCAGCAGTTGCTTCTCTTGCTGCTACTGGTTCAGCAAACGCGGCAGT
TCAACTTGCTGGTGATGCAGTTCAATTCTACGGCCAAGCAGCTGGTTACATTACCGTTGCTGACAGCGGTGACACGACGG
TTGTTGCTACAACTATTGAATCTCGTATCGGTTTCCGTGGCGTAGTAGAGTTTGAAGACTTTTCACCTAAGTTTGTATGG
CAAATTGAAGGCGGTAACGCAGACAATGGTGGTTTTAACCCAAATGAAGGCTGGAATCACGTAAATAACGGTCAGTTGGG
TGCTCGAGACACTTACCTTGGTTTTGACTTTGGTAAAGGTGGTCGCTTTACATATGGACGTCAACTTGTTGCAGCATATA
ACTATGTAGACTGGCCACACTCTAACCCTGGTCTAGGTAATGTTTTTGACTGGAACAATGATATCGGTGCTGGTTATCAA
GATCGTGCAAGCAACAACTTACGTTATGACTCTGCAAACTTTGGTGGCTTTAGCTTCCAAGCGACATTGAGCGGAATGGA
ATCAGACATTGACGGTCTTGTGAGCAGTGTTGGTGCTTCTTACGGCAACGACGTTTTCAATATTCACGGTGGTGTGTATA
GTCGTGGTGAATACGGTACTGGTGCAGATCTAAAATATGCAAATAGCTACGGTATTTTAGGTGGTAGCCTCTATCTTGGT
AGCCTAACTTTAACTGCTGCCTACAAAGCAATGGAAGCAGATTCAGCTACTGGTACGCTTAAACAAAATGCACTTTCTAC
GACCGCACAGTATGTAATCGATGGTAAGTGGGTATTGAAAGCTGGCTATGCTGCTACTGATGATGCTACTGGTGACAGTA
AGTCATCTGACACTGCTGTAACTGCTCGCCTAGGTTACATTTTACCAAGTGCATATCTATACCTAGATTCACGTAACTAC
AAGATGAACGAAGCGAGTGATTGGACCAAAGCTATCCTAGCTGGTGTTGAGTACTACTTCTAA

Upstream 100 bases:

>100_bases
TTAATTAGGTTTTTTGAAAGGAAATGATTTCTCCCTTCGGCGGCCAACTAAAGGTGAGAATGAAAAAAATACAGCTATAT
CCATTTTTAGGAGTTTTTCC

Downstream 100 bases:

>100_bases
TAATCTTTAGAGTTTTCTAGAATGTCTTTTCAACGAGCGTCATACTAGACGCTCGTTTTTTTTCAGGAGTATAACTATGA
GATATATTGGTAAATGGATG

Product: outer membrane protein

Products: NA

Alternate protein names: Chitoporin; Chitoporin ChiP

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MDKMFKRTLLGAAVASLAATGSANAAVQLAGDAVQFYGQAAGYITVADSGDTTVVATTIESRIGFRGVVEFEDFSPKFVW
QIEGGNADNGGFNPNEGWNHVNNGQLGARDTYLGFDFGKGGRFTYGRQLVAAYNYVDWPHSNPGLGNVFDWNNDIGAGYQ
DRASNNLRYDSANFGGFSFQATLSGMESDIDGLVSSVGASYGNDVFNIHGGVYSRGEYGTGADLKYANSYGILGGSLYLG
SLTLTAAYKAMEADSATGTLKQNALSTTAQYVIDGKWVLKAGYAATDDATGDSKSSDTAVTARLGYILPSAYLYLDSRNY
KMNEASDWTKAILAGVEYYF

Sequences:

>Translated_340_residues
MDKMFKRTLLGAAVASLAATGSANAAVQLAGDAVQFYGQAAGYITVADSGDTTVVATTIESRIGFRGVVEFEDFSPKFVW
QIEGGNADNGGFNPNEGWNHVNNGQLGARDTYLGFDFGKGGRFTYGRQLVAAYNYVDWPHSNPGLGNVFDWNNDIGAGYQ
DRASNNLRYDSANFGGFSFQATLSGMESDIDGLVSSVGASYGNDVFNIHGGVYSRGEYGTGADLKYANSYGILGGSLYLG
SLTLTAAYKAMEADSATGTLKQNALSTTAQYVIDGKWVLKAGYAATDDATGDSKSSDTAVTARLGYILPSAYLYLDSRNY
KMNEASDWTKAILAGVEYYF
>Mature_340_residues
MDKMFKRTLLGAAVASLAATGSANAAVQLAGDAVQFYGQAAGYITVADSGDTTVVATTIESRIGFRGVVEFEDFSPKFVW
QIEGGNADNGGFNPNEGWNHVNNGQLGARDTYLGFDFGKGGRFTYGRQLVAAYNYVDWPHSNPGLGNVFDWNNDIGAGYQ
DRASNNLRYDSANFGGFSFQATLSGMESDIDGLVSSVGASYGNDVFNIHGGVYSRGEYGTGADLKYANSYGILGGSLYLG
SLTLTAAYKAMEADSATGTLKQNALSTTAQYVIDGKWVLKAGYAATDDATGDSKSSDTAVTARLGYILPSAYLYLDSRNY
KMNEASDWTKAILAGVEYYF

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Integral membrane protein. Outer membrane (By similarity) [C]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36209; Mature: 36209

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKMFKRTLLGAAVASLAATGSANAAVQLAGDAVQFYGQAAGYITVADSGDTTVVATTIE
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCEEEEECCCCCEEEEEEEH
SRIGFRGVVEFEDFSPKFVWQIEGGNADNGGFNPNEGWNHVNNGQLGARDTYLGFDFGKG
HCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
GRFTYGRQLVAAYNYVDWPHSNPGLGNVFDWNNDIGAGYQDRASNNLRYDSANFGGFSFQ
CCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCEEEE
ATLSGMESDIDGLVSSVGASYGNDVFNIHGGVYSRGEYGTGADLKYANSYGILGGSLYLG
EECCCCHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCEEECCCCCCEECEEEEE
SLTLTAAYKAMEADSATGTLKQNALSTTAQYVIDGKWVLKAGYAATDDATGDSKSSDTAV
EEEEHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCEEEEEECCCCCCCCCCCCCCCCCEE
TARLGYILPSAYLYLDSRNYKMNEASDWTKAILAGVEYYF
EEHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKMFKRTLLGAAVASLAATGSANAAVQLAGDAVQFYGQAAGYITVADSGDTTVVATTIE
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCEEEEECCCCCEEEEEEEH
SRIGFRGVVEFEDFSPKFVWQIEGGNADNGGFNPNEGWNHVNNGQLGARDTYLGFDFGKG
HCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
GRFTYGRQLVAAYNYVDWPHSNPGLGNVFDWNNDIGAGYQDRASNNLRYDSANFGGFSFQ
CCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCEEEE
ATLSGMESDIDGLVSSVGASYGNDVFNIHGGVYSRGEYGTGADLKYANSYGILGGSLYLG
EECCCCHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCEEECCCCCCEECEEEEE
SLTLTAAYKAMEADSATGTLKQNALSTTAQYVIDGKWVLKAGYAATDDATGDSKSSDTAV
EEEEHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCEEEEEECCCCCCCCCCCCCCCCCEE
TARLGYILPSAYLYLDSRNYKMNEASDWTKAILAGVEYYF
EEHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA