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The map label for this gene is yccT [C]

Identifier: 37679168

GI number: 37679168

Start: 984416

End: 985153

Strand: Direct

Name: yccT [C]

Synonym: VV0984

Alternate gene names: 37679168

Gene position: 984416-985153 (Clockwise)

Preceding gene: 37679167

Following gene: 37679172

Centisome position: 29.35

GC content: 35.23

Gene sequence:

>738_bases
ATGAGATATATTGGTAAATGGATGATGTTGGGGGCACTAGTGTCATCCTCAGTATTTGCAGATGTTAAAGTGAATATCCA
CCGAGATGTTGCTCCACTTGTAGTTAATGGAGAAAAAGTTGGCTTTTTTATTAGTAAAAAAAGCGTTCTAGATTTTGACA
ATGGGTTAAATCAACTTGTTGTTAGGGTTGAAAAGCTAATTGACAATAATCAGGGAGAGAAAGAAAAGTTTAACTCAAAG
CCCGTTATCATCACATTTAAGGCATCAGATAGAGAATTAGATCTATTTGTTGATAGTGTGATTAGTCGATCAAAAGATGC
AGAAGAGTTTGAGCTTAATCCGTTTTTTATCCTTAAGGATAAAAATGGTGATCCGATACAGATTATGAAGCAAGAAATTC
TTCCAAATGGTGGTGGCATCACGCGAGACTATGAGACTGAGGTTTATAGATACAACAAAAAAAACAACATCATCATAGCA
TCTGAGAAACTTAGCCAATCTATAGCTGAGCAGCCAATAGTTGAGATGGAGAAAGGCGTTGAAATGGTGCAATACTGGTA
CGAGAAAGCGTCGAATGAGGATAAAAAACAGTTTGCTTCACTTGCTTTTGAAAACCGAAAATCTGAGATTGCTAAACAAA
ACACAAAATCACAAGAGTTGGATATGCTTGTTTACTGGTTCAACCAAACCAGTGAAAACGGTAGAAAAAATATAATTAAC
TGGATTATGAATAATTAA

Upstream 100 bases:

>100_bases
GCTGGTGTTGAGTACTACTTCTAATAATCTTTAGAGTTTTCTAGAATGTCTTTTCAACGAGCGTCATACTAGACGCTCGT
TTTTTTTCAGGAGTATAACT

Downstream 100 bases:

>100_bases
TGAATTCGCAAGATTGGTAACCTTAATGGTAGTGAAGGTTACCAATCAAATTGAATGAGTCTTAATATTTATGGCGTAGC
CTGTACTTCTACCTTCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MRYIGKWMMLGALVSSSVFADVKVNIHRDVAPLVVNGEKVGFFISKKSVLDFDNGLNQLVVRVEKLIDNNQGEKEKFNSK
PVIITFKASDRELDLFVDSVISRSKDAEEFELNPFFILKDKNGDPIQIMKQEILPNGGGITRDYETEVYRYNKKNNIIIA
SEKLSQSIAEQPIVEMEKGVEMVQYWYEKASNEDKKQFASLAFENRKSEIAKQNTKSQELDMLVYWFNQTSENGRKNIIN
WIMNN

Sequences:

>Translated_245_residues
MRYIGKWMMLGALVSSSVFADVKVNIHRDVAPLVVNGEKVGFFISKKSVLDFDNGLNQLVVRVEKLIDNNQGEKEKFNSK
PVIITFKASDRELDLFVDSVISRSKDAEEFELNPFFILKDKNGDPIQIMKQEILPNGGGITRDYETEVYRYNKKNNIIIA
SEKLSQSIAEQPIVEMEKGVEMVQYWYEKASNEDKKQFASLAFENRKSEIAKQNTKSQELDMLVYWFNQTSENGRKNIIN
WIMNN
>Mature_245_residues
MRYIGKWMMLGALVSSSVFADVKVNIHRDVAPLVVNGEKVGFFISKKSVLDFDNGLNQLVVRVEKLIDNNQGEKEKFNSK
PVIITFKASDRELDLFVDSVISRSKDAEEFELNPFFILKDKNGDPIQIMKQEILPNGGGITRDYETEVYRYNKKNNIIIA
SEKLSQSIAEQPIVEMEKGVEMVQYWYEKASNEDKKQFASLAFENRKSEIAKQNTKSQELDMLVYWFNQTSENGRKNIIN
WIMNN

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family

Homologues:

Organism=Escherichia coli, GI1787198, Length=203, Percent_Identity=25.1231527093596, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y984_VIBVY (Q7MMT3)

Other databases:

- EMBL:   BA000037
- RefSeq:   NP_933777.1
- STRING:   Q7MMT3
- GeneID:   2623779
- GenomeReviews:   BA000037_GR
- KEGG:   vvy:VV0984
- NMPDR:   fig|196600.1.peg.1052
- eggNOG:   COG3110
- BioCyc:   VVUL196600:VV0984-MONOMER
- HAMAP:   MF_00789
- InterPro:   IPR018635

Pfam domain/function: PF09829 DUF2057

EC number: NA

Molecular weight: Translated: 28279; Mature: 28279

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYIGKWMMLGALVSSSVFADVKVNIHRDVAPLVVNGEKVGFFISKKSVLDFDNGLNQLV
CCHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEECCCEEEEEEECCCCCCHHCCHHHHH
VRVEKLIDNNQGEKEKFNSKPVIITFKASDRELDLFVDSVISRSKDAEEFELNPFFILKD
HHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEECCCEEEEEC
KNGDPIQIMKQEILPNGGGITRDYETEVYRYNKKNNIIIASEKLSQSIAEQPIVEMEKGV
CCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHCHHHHHHHHH
EMVQYWYEKASNEDKKQFASLAFENRKSEIAKQNTKSQELDMLVYWFNQTSENGRKNIIN
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCHHHHHH
WIMNN
HHCCC
>Mature Secondary Structure
MRYIGKWMMLGALVSSSVFADVKVNIHRDVAPLVVNGEKVGFFISKKSVLDFDNGLNQLV
CCHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEECCCEEEEEEECCCCCCHHCCHHHHH
VRVEKLIDNNQGEKEKFNSKPVIITFKASDRELDLFVDSVISRSKDAEEFELNPFFILKD
HHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEECCCEEEEEC
KNGDPIQIMKQEILPNGGGITRDYETEVYRYNKKNNIIIASEKLSQSIAEQPIVEMEKGV
CCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHCHHHHHHHHH
EMVQYWYEKASNEDKKQFASLAFENRKSEIAKQNTKSQELDMLVYWFNQTSENGRKNIIN
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCHHHHHH
WIMNN
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA