| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679063
Identifier: 37679063
GI number: 37679063
Start: 880552
End: 881178
Strand: Direct
Name: 37679063
Synonym: VV0879
Alternate gene names: NA
Gene position: 880552-881178 (Clockwise)
Preceding gene: 37679062
Following gene: 37679064
Centisome position: 26.25
GC content: 49.92
Gene sequence:
>627_bases ATGAATCTGCCATGCATTATTGATGGGCCAGACAACGGACCGCTGTTTATTTTTGCTCACGGTGCAGGGGCTCCGATGGA GCATGCTTTTATGACCGCAGTGGCTCAAGGATTGGCAAAGGAAGGGATTCGCGTGGTGCGTTTCAATTTCCCTTATATGG CCAAACGAGCTGAAGATGGCAAAAAACGCCCACCGGATCGCGCGCCGAAATTGCTGGAAGCCTTTTCCGAAGTGATAGCA TCCGTGACCGATGACCCCGTGATCATTGGGGGGAAGTCGATGGGCGGACGTATGGCGAGTTTGTTGTCGGAGCACCCCCT CGTGAAAGGGATTGCCTGTTTAGGTTTTCCGTTTCATCCTCCCGGTAAGCCTGAAAAGTTCAAAGGTGAGCACTTACAAA CATTGAGTAAACCGACGTTGATTTTGCAAGGTGAGCGAGACACGTTTGGCACTCAAACTGAGTGTCAGCAATTTGAGTTT TCCTCAATGGTGCGCTTGGCGTTTTTGCCTGACGGCGATCATAGTTTTAAACCGAGAAAAAGTTCTGGCCATACAGAAGC AGGCAATGTGCAGTTGGCGATTGAGCAGCTGTGCGCTTTTATAAAAGGGGGGGACGATGAAAAGTAA
Upstream 100 bases:
>100_bases TACGTCGTCTGCCATGAACAGCAAGCTGACATGGGGCGTATCGCGCGATTTCGAGACTGGATGTTAGTGACCGCGCGCAA AGAACAAGAAGAGGTGTTAG
Downstream 100 bases:
>100_bases GTGGCTGCTCACTTTTGTTGGTTTCTCAGGCGCATCGGCGGTTGCACTTGGCGCGTTTGCTGCTCACGGACTCAAAAGTC AATTGTCGCCGTATTTGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MNLPCIIDGPDNGPLFIFAHGAGAPMEHAFMTAVAQGLAKEGIRVVRFNFPYMAKRAEDGKKRPPDRAPKLLEAFSEVIA SVTDDPVIIGGKSMGGRMASLLSEHPLVKGIACLGFPFHPPGKPEKFKGEHLQTLSKPTLILQGERDTFGTQTECQQFEF SSMVRLAFLPDGDHSFKPRKSSGHTEAGNVQLAIEQLCAFIKGGDDEK
Sequences:
>Translated_208_residues MNLPCIIDGPDNGPLFIFAHGAGAPMEHAFMTAVAQGLAKEGIRVVRFNFPYMAKRAEDGKKRPPDRAPKLLEAFSEVIA SVTDDPVIIGGKSMGGRMASLLSEHPLVKGIACLGFPFHPPGKPEKFKGEHLQTLSKPTLILQGERDTFGTQTECQQFEF SSMVRLAFLPDGDHSFKPRKSSGHTEAGNVQLAIEQLCAFIKGGDDEK >Mature_208_residues MNLPCIIDGPDNGPLFIFAHGAGAPMEHAFMTAVAQGLAKEGIRVVRFNFPYMAKRAEDGKKRPPDRAPKLLEAFSEVIA SVTDDPVIIGGKSMGGRMASLLSEHPLVKGIACLGFPFHPPGKPEKFKGEHLQTLSKPTLILQGERDTFGTQTECQQFEF SSMVRLAFLPDGDHSFKPRKSSGHTEAGNVQLAIEQLCAFIKGGDDEK
Specific function: Unknown
COG id: COG3571
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22576; Mature: 22576
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPCIIDGPDNGPLFIFAHGAGAPMEHAFMTAVAQGLAKEGIRVVRFNFPYMAKRAEDG CCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCC KKRPPDRAPKLLEAFSEVIASVTDDPVIIGGKSMGGRMASLLSEHPLVKGIACLGFPFHP CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCC PGKPEKFKGEHLQTLSKPTLILQGERDTFGTQTECQQFEFSSMVRLAFLPDGDHSFKPRK CCCCCCCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCCC SSGHTEAGNVQLAIEQLCAFIKGGDDEK CCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNLPCIIDGPDNGPLFIFAHGAGAPMEHAFMTAVAQGLAKEGIRVVRFNFPYMAKRAEDG CCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCC KKRPPDRAPKLLEAFSEVIASVTDDPVIIGGKSMGGRMASLLSEHPLVKGIACLGFPFHP CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCC PGKPEKFKGEHLQTLSKPTLILQGERDTFGTQTECQQFEFSSMVRLAFLPDGDHSFKPRK CCCCCCCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCCC SSGHTEAGNVQLAIEQLCAFIKGGDDEK CCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA