| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678714
Identifier: 37678714
GI number: 37678714
Start: 513467
End: 514510
Strand: Direct
Name: 37678714
Synonym: VV0530
Alternate gene names: NA
Gene position: 513467-514510 (Clockwise)
Preceding gene: 37678713
Following gene: 37678715
Centisome position: 15.31
GC content: 40.9
Gene sequence:
>1044_bases GTGGCTTTTCTGTTCCGGAGAAGATTTATGTATATCATTCCACTAAACAAAGCACAGTTTAATCAGCAAGAAACAATTTT AATTCAATCTGAGGATTTTAAAGTATCAGCGTTCAAATATAACTCTGGGGTCGAAGGGTTAAAAATAGAAAATGCGAAAG GTTATTTAACAATTCTGCCTTACATGGGGCAAATGATTTGGGATGCGAAATTTCTAGGTGAAGACATTTGTATGGAGAAC ATGTTTTCGGAGCCGAAACCAAGCAATGAGATTGTAGCCACATACGGATGTTTCGCTTTCCATTCTGGCATGATTAGAAA TGGTTGTCCAAGTCCTGAAGATGACCACCCGCTGCACGGTGAAATGCCGTGTGCTAATATGGATAAAGTATGGTTAGAAG TCGATGAATATCAAATTACTCTAAAGGGTGAATATGAGTATGTAATGGGTTTTGGAGACCACTACTTAGCGACTCCGTCA GTTTCTATTGAGAAGGGGGCGTCTATGTTTGAGATTAAAATGAAAGTGCAAAACTTAGCTTCGGTCCCAATGCCACTACA GTATATGTGTCACATGAATACGGCATACTTCCCAGAGGCGAAGATGACGCAAAACATTCCGGATAGTGCGGTTAAGTTGC GTAAATCGATTCCCGGCCATGTTAAGCCAACACAACAATGGCTCGATTTTAACGACACACTCAAAGCGCAATCAGCACCC ATTCATCAGCTTTCTGCACCAGACATGTATGACCCTGAAATCGTTTATTTTATGGATAACTTGTCTCAGCATACTGACAA TGCTGAGTTTGAAATGACAATACCGAATGGCAAGACGTTAATTACTCGATTTGATACGACAGAATTCAACTATGCGACGC GTTGGATCTTGTACAACGGAGACCAAAAAGTCGGAGCCTATGTCCTGCCTGCAACTTGTCGACCAGAAGGTTACTTAGCC GCTGAGAAAAACGGTACGTTGATTCAATTGCAACCAAAGGAAGTGAGAGAGTTTACAGTGAAAACAGGCATTATTGAAAA ATAA
Upstream 100 bases:
>100_bases GTTATTATTTCTTAGGTGAAATGAAAAATAAGAACCAAAGCGAAAAACAGACTCAATTAGCAGAACAAACAAATTAATGT AGCAAAAAGCCACTTTATAA
Downstream 100 bases:
>100_bases AACTTTGCGGTGTGATGTAAAAAACAGCCATTTGTTTGGCTGTTTTTTTAGTTTGAAAGCAATTTTGTAGACAAAAAAGT AAGAATCTATGAATCCACTT
Product: putative cytoplasmic protein
Products: NA
Alternate protein names: Monosaccharide-Transporting ATPase; Deoxyribocific Mutarotase; Conserved Protein
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAFLFRRRFMYIIPLNKAQFNQQETILIQSEDFKVSAFKYNSGVEGLKIENAKGYLTILPYMGQMIWDAKFLGEDICMEN MFSEPKPSNEIVATYGCFAFHSGMIRNGCPSPEDDHPLHGEMPCANMDKVWLEVDEYQITLKGEYEYVMGFGDHYLATPS VSIEKGASMFEIKMKVQNLASVPMPLQYMCHMNTAYFPEAKMTQNIPDSAVKLRKSIPGHVKPTQQWLDFNDTLKAQSAP IHQLSAPDMYDPEIVYFMDNLSQHTDNAEFEMTIPNGKTLITRFDTTEFNYATRWILYNGDQKVGAYVLPATCRPEGYLA AEKNGTLIQLQPKEVREFTVKTGIIEK
Sequences:
>Translated_347_residues MAFLFRRRFMYIIPLNKAQFNQQETILIQSEDFKVSAFKYNSGVEGLKIENAKGYLTILPYMGQMIWDAKFLGEDICMEN MFSEPKPSNEIVATYGCFAFHSGMIRNGCPSPEDDHPLHGEMPCANMDKVWLEVDEYQITLKGEYEYVMGFGDHYLATPS VSIEKGASMFEIKMKVQNLASVPMPLQYMCHMNTAYFPEAKMTQNIPDSAVKLRKSIPGHVKPTQQWLDFNDTLKAQSAP IHQLSAPDMYDPEIVYFMDNLSQHTDNAEFEMTIPNGKTLITRFDTTEFNYATRWILYNGDQKVGAYVLPATCRPEGYLA AEKNGTLIQLQPKEVREFTVKTGIIEK >Mature_346_residues AFLFRRRFMYIIPLNKAQFNQQETILIQSEDFKVSAFKYNSGVEGLKIENAKGYLTILPYMGQMIWDAKFLGEDICMENM FSEPKPSNEIVATYGCFAFHSGMIRNGCPSPEDDHPLHGEMPCANMDKVWLEVDEYQITLKGEYEYVMGFGDHYLATPSV SIEKGASMFEIKMKVQNLASVPMPLQYMCHMNTAYFPEAKMTQNIPDSAVKLRKSIPGHVKPTQQWLDFNDTLKAQSAPI HQLSAPDMYDPEIVYFMDNLSQHTDNAEFEMTIPNGKTLITRFDTTEFNYATRWILYNGDQKVGAYVLPATCRPEGYLAA EKNGTLIQLQPKEVREFTVKTGIIEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39674; Mature: 39543
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLFRRRFMYIIPLNKAQFNQQETILIQSEDFKVSAFKYNSGVEGLKIENAKGYLTILP CCEEEEEEEEEEEECCHHHCCCCEEEEEECCCCEEEEEEECCCCCCEEEECCCCEEEEEC YMGQMIWDAKFLGEDICMENMFSEPKPSNEIVATYGCFAFHSGMIRNGCPSPEDDHPLHG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCHHHCCCCCCCCCCCCCC EMPCANMDKVWLEVDEYQITLKGEYEYVMGFGDHYLATPSVSIEKGASMFEIKMKVQNLA CCCCCCCCEEEEEEEEEEEEEECCEEEEEECCCCEEECCCCCHHCCCCEEEEEEEHHHHH SVPMPLQYMCHMNTAYFPEAKMTQNIPDSAVKLRKSIPGHVKPTQQWLDFNDTLKAQSAP CCCCCHHHHEECCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCC IHQLSAPDMYDPEIVYFMDNLSQHTDNAEFEMTIPNGKTLITRFDTTEFNYATRWILYNG CCCCCCCCCCCCEEEEEECCHHHCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEECC DQKVGAYVLPATCRPEGYLAAEKNGTLIQLQPKEVREFTVKTGIIEK CCCCCEEEEECCCCCCCEEEECCCCCEEEECHHHHHHHHHHCCCCCC >Mature Secondary Structure AFLFRRRFMYIIPLNKAQFNQQETILIQSEDFKVSAFKYNSGVEGLKIENAKGYLTILP CEEEEEEEEEEEECCHHHCCCCEEEEEECCCCEEEEEEECCCCCCEEEECCCCEEEEEC YMGQMIWDAKFLGEDICMENMFSEPKPSNEIVATYGCFAFHSGMIRNGCPSPEDDHPLHG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCHHHCCCCCCCCCCCCCC EMPCANMDKVWLEVDEYQITLKGEYEYVMGFGDHYLATPSVSIEKGASMFEIKMKVQNLA CCCCCCCCEEEEEEEEEEEEEECCEEEEEECCCCEEECCCCCHHCCCCEEEEEEEHHHHH SVPMPLQYMCHMNTAYFPEAKMTQNIPDSAVKLRKSIPGHVKPTQQWLDFNDTLKAQSAP CCCCCHHHHEECCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCC IHQLSAPDMYDPEIVYFMDNLSQHTDNAEFEMTIPNGKTLITRFDTTEFNYATRWILYNG CCCCCCCCCCCCEEEEEECCHHHCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEECC DQKVGAYVLPATCRPEGYLAAEKNGTLIQLQPKEVREFTVKTGIIEK CCCCCEEEEECCCCCCCEEEECCCCCEEEECHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA