| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is yefI [C]
Identifier: 37678532
GI number: 37678532
Start: 356341
End: 357423
Strand: Direct
Name: yefI [C]
Synonym: VV0348
Alternate gene names: 37678532
Gene position: 356341-357423 (Clockwise)
Preceding gene: 37678531
Following gene: 37678533
Centisome position: 10.62
GC content: 32.5
Gene sequence:
>1083_bases ATGAATAAGTTATTAATAAACTTTTTTAGTGCTAAATCTGGTGGCGGTAAAGTCATTTTAGATAATTTCATGGAGCATTT TGATGCTGATGATGTCGAGATTCACTTTATATTTCCATCCGAATATGATTTTAAATTTGAGAAGCATCTTGAAGTTAAAG TTCCGAAGTGGATGAATAAACCGTATGGTTTATTTTGGTTTTATTTTTTCTTTGTGCCTAATTACTGTAGAAAAAATGGG ATTTCTAAAGTTCTTAACTTTGGAGATGTAATCTTTCCAAGGTTGAAAAGTCAAACTTATTTTTTTGATTGGGCATATTT AGTTTTAGACGACTCGAATATTTGGTCCTCAATGGACTTTAAGAGTCGTTTTATCCGGATGTTGAAAGCAGCTTTAATTA AAGCTTTTAAATCCAATAATAAAACAGTCATAGTACAGAGTGAAGCAATTTCAAGTTCATATAAGAAGATCTTAGGCTTT GAAGGGGAGATTGTTGTTGCCCCGACACCTGTAAGCATAAATAATATCGATGGGATGTCTCATGGTATTGATAAAAACTC TTTGGTGTATATTTCGAATTATGCTCCACATAAAAATTTCGAAATAATACCTAGAGTTGCTTCAATTTTAAAACAAAACA AAGTTGATTGTTCAATTGTACTTACTATAGATGAAAACTCTATTCATTGGAGAAACTTGAGTTGTGAATTGTCAGGTTTG GGGGTTTTAGATATGGTGAAAACGTTAGGTCCTTTATCTCAAGAGGATGTTTTTTCGGTATTGAAAAGTTCAAGAGCATT ATTTTTCCCATCAAAACTTGAATCATATGGTATTCCTCTCATTGAAGCTATGATTCTTGGGAAACCTGTCTTAACTTCTG ATACTCCATTTATTAAGAGTGTGTGTGGTGATGCTGTATTGTACTTCGATCCTAAATGCCCTGAAGATATAGCAACAAAA ATCACTGATTTTATTGATGGGGTCGACTACTGTAGAATGAGACAATCTGAAGTTTCAAAGGTTTTAGAAAACATCCCTAG TTGGGATCAATATACACGTTTGCTAATTAAAAGTAGCATTTAA
Upstream 100 bases:
>100_bases CAGAGGAAAAGTCTAATATGTCCAAGCGTTCTAGAGAACTTGGCACGCGCATTTCACCTCAGTCAAGTGCTGCTAGTTTT ATGTCTCTATTGGGGTATAA
Downstream 100 bases:
>100_bases AAAGAGAGAATAAAATGCCAAATAAAGTTGCCTTAATTACAGGTGTAACGGGTCAGGACGGATCATACTTAGCAGAGTTC CTTTTAGAAAAAGGTTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Mannosyltransferase; Group 1 Glycosyl Transferase; Group Glycosyltransferase; Glycosyl Transferase Group 1 Protein; Glycosyl Transferase; Mannosyltransferase B
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MNKLLINFFSAKSGGGKVILDNFMEHFDADDVEIHFIFPSEYDFKFEKHLEVKVPKWMNKPYGLFWFYFFFVPNYCRKNG ISKVLNFGDVIFPRLKSQTYFFDWAYLVLDDSNIWSSMDFKSRFIRMLKAALIKAFKSNNKTVIVQSEAISSSYKKILGF EGEIVVAPTPVSINNIDGMSHGIDKNSLVYISNYAPHKNFEIIPRVASILKQNKVDCSIVLTIDENSIHWRNLSCELSGL GVLDMVKTLGPLSQEDVFSVLKSSRALFFPSKLESYGIPLIEAMILGKPVLTSDTPFIKSVCGDAVLYFDPKCPEDIATK ITDFIDGVDYCRMRQSEVSKVLENIPSWDQYTRLLIKSSI
Sequences:
>Translated_360_residues MNKLLINFFSAKSGGGKVILDNFMEHFDADDVEIHFIFPSEYDFKFEKHLEVKVPKWMNKPYGLFWFYFFFVPNYCRKNG ISKVLNFGDVIFPRLKSQTYFFDWAYLVLDDSNIWSSMDFKSRFIRMLKAALIKAFKSNNKTVIVQSEAISSSYKKILGF EGEIVVAPTPVSINNIDGMSHGIDKNSLVYISNYAPHKNFEIIPRVASILKQNKVDCSIVLTIDENSIHWRNLSCELSGL GVLDMVKTLGPLSQEDVFSVLKSSRALFFPSKLESYGIPLIEAMILGKPVLTSDTPFIKSVCGDAVLYFDPKCPEDIATK ITDFIDGVDYCRMRQSEVSKVLENIPSWDQYTRLLIKSSI >Mature_360_residues MNKLLINFFSAKSGGGKVILDNFMEHFDADDVEIHFIFPSEYDFKFEKHLEVKVPKWMNKPYGLFWFYFFFVPNYCRKNG ISKVLNFGDVIFPRLKSQTYFFDWAYLVLDDSNIWSSMDFKSRFIRMLKAALIKAFKSNNKTVIVQSEAISSSYKKILGF EGEIVVAPTPVSINNIDGMSHGIDKNSLVYISNYAPHKNFEIIPRVASILKQNKVDCSIVLTIDENSIHWRNLSCELSGL GVLDMVKTLGPLSQEDVFSVLKSSRALFFPSKLESYGIPLIEAMILGKPVLTSDTPFIKSVCGDAVLYFDPKCPEDIATK ITDFIDGVDYCRMRQSEVSKVLENIPSWDQYTRLLIKSSI
Specific function: May Be A Glycosyltransferase Involved In The Transfer Of UDP-Galf And UDP-Glucose. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41110; Mature: 41110
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLLINFFSAKSGGGKVILDNFMEHFDADDVEIHFIFPSEYDFKFEKHLEVKVPKWMNK CCCEEEEEEECCCCCCEEHHHHHHHHCCCCCEEEEEECCCCCCCEEECEEEEECHHHCCC PYGLFWFYFFFVPNYCRKNGISKVLNFGDVIFPRLKSQTYFFDWAYLVLDDSNIWSSMDF CCHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCH KSRFIRMLKAALIKAFKSNNKTVIVQSEAISSSYKKILGFEGEIVVAPTPVSINNIDGMS HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCEECCCCCCC HGIDKNSLVYISNYAPHKNFEIIPRVASILKQNKVDCSIVLTIDENSIHWRNLSCELSGL CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEEEECCC GVLDMVKTLGPLSQEDVFSVLKSSRALFFPSKLESYGIPLIEAMILGKPVLTSDTPFIKS CHHHHHHHHCCCCHHHHHHHHHCCCCEECCHHHHHCCCHHHHHHHHCCCCCCCCCHHHHH VCGDAVLYFDPKCPEDIATKITDFIDGVDYCRMRQSEVSKVLENIPSWDQYTRLLIKSSI HHCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNKLLINFFSAKSGGGKVILDNFMEHFDADDVEIHFIFPSEYDFKFEKHLEVKVPKWMNK CCCEEEEEEECCCCCCEEHHHHHHHHCCCCCEEEEEECCCCCCCEEECEEEEECHHHCCC PYGLFWFYFFFVPNYCRKNGISKVLNFGDVIFPRLKSQTYFFDWAYLVLDDSNIWSSMDF CCHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCH KSRFIRMLKAALIKAFKSNNKTVIVQSEAISSSYKKILGFEGEIVVAPTPVSINNIDGMS HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCEECCCCCCC HGIDKNSLVYISNYAPHKNFEIIPRVASILKQNKVDCSIVLTIDENSIHWRNLSCELSGL CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEEEECCC GVLDMVKTLGPLSQEDVFSVLKSSRALFFPSKLESYGIPLIEAMILGKPVLTSDTPFIKS CHHHHHHHHCCCCHHHHHHHHHCCCCEECCHHHHHCCCHHHHHHHHCCCCCCCCCHHHHH VCGDAVLYFDPKCPEDIATKITDFIDGVDYCRMRQSEVSKVLENIPSWDQYTRLLIKSSI HHCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA