| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is wecB [H]
Identifier: 37678525
GI number: 37678525
Start: 348769
End: 349908
Strand: Direct
Name: wecB [H]
Synonym: VV0341
Alternate gene names: 37678525
Gene position: 348769-349908 (Clockwise)
Preceding gene: 37678524
Following gene: 37678526
Centisome position: 10.4
GC content: 45.7
Gene sequence:
>1140_bases TTGTTGGTTAGTTGTATGTCAAAGAAGAAAGTTCTTACGGTTTTTGGAACACGCCCAGAAGCAATAAAAATGGCGCCATT AGTGCATGCTTTAGCGGCGGATGAACGTTTCGAAGCAAAATGTTGTGTAACGGCTCAACACCGTGAAATGCTCGATCAAG TTTTAGAGTTGTTTGAAATTACTCCGGACTATGATCTAAACCTGATGAAAGCAGGTCAAACGCTCAATGAAGTGACGGCG CGAATTTTGTTAGAGTTAAAACCTGTTTTACAAGAGTTCAAACCTGATGTAGTCCTAGTTCACGGCGACACTGCTACAAC GTTTGCCGCCAGCTTAGCAGCCTATTATGAGCAAATTGCTGTTGGGCATGTTGAAGCAGGCCTGCGCACAGGCAACATCT ATTCACCATGGCCAGAGGAAGCTAACCGCAAGCTCACCGGTGCGTTAACCAAATACCATTTTGCTCCAACAGAAACCTCG CAGCAAAATTTGCTGCAAGAGAATTACGCAGAAGAGAATATTTTCGTCACTGGCAATACGGTAATTGATGCGCTGCTAAT GGTGAAAGAGAAAATTGAGCAAGATGCTGATCTAAAAGCAACCTTAGCCGCACAGTTCCCTTACTTAGATGAAAACAAAA AGCTCATCTTGGTCACTGGTCATCGACGCGAAAGCTTTGGCGGTGGTTTTGAGCGTATTTGTGAAGCACTAGCACAAACC GCAAAACAGCACCCTGAGGTGCAAATTCTCTACCCTATGCATTTAAACCCTAACGTGCGTGAACCGGTTAATCGTATTCT AGGTAGCGTGGAAAATGTGCTGCTGATTGAGCCGCAACAGTACTTGCCCTTTATCTACTTAATGGACCGAGCGCACATTA TTCTCACCGATTCCGGTGGTATTCAAGAAGAAGCGCCATCCCTTGGGAAACCCGTGTTATTGATGCGTGATACGACCGAG CGCCCAGAAGCGGTGGCAGCAGGGACAGTTAAATTGGTGGGAACAGATGTAGAAAAAATCGTCTCCAACCTAAACACCTT GCTTACCGATAGCGAAGCCTATCAAGCGATGAGCTTTGCCCATAACCCATACGGTGATGGTAAAGCGTGCCAGAGAATTC TCGATTCTCTGTGCAAGTAA
Upstream 100 bases:
>100_bases ACTATAGCTATGGTGAGAGTAATAAAGCTTAAATTAACCGGGGAGAACTGCTATTCGGCTGTTATCTCCTCGGTATCTCC AGAATTTTGTATCTAAATTA
Downstream 100 bases:
>100_bases CTTTTAAATATCTCCTAGAACCTAGAACCTAGAACCTAGAACCTAGAACAAAATTTATATATATTTTTAGGACTCAGAAA AATGTCTTTTGAAACCATTT
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MLVSCMSKKKVLTVFGTRPEAIKMAPLVHALAADERFEAKCCVTAQHREMLDQVLELFEITPDYDLNLMKAGQTLNEVTA RILLELKPVLQEFKPDVVLVHGDTATTFAASLAAYYEQIAVGHVEAGLRTGNIYSPWPEEANRKLTGALTKYHFAPTETS QQNLLQENYAEENIFVTGNTVIDALLMVKEKIEQDADLKATLAAQFPYLDENKKLILVTGHRRESFGGGFERICEALAQT AKQHPEVQILYPMHLNPNVREPVNRILGSVENVLLIEPQQYLPFIYLMDRAHIILTDSGGIQEEAPSLGKPVLLMRDTTE RPEAVAAGTVKLVGTDVEKIVSNLNTLLTDSEAYQAMSFAHNPYGDGKACQRILDSLCK
Sequences:
>Translated_379_residues MLVSCMSKKKVLTVFGTRPEAIKMAPLVHALAADERFEAKCCVTAQHREMLDQVLELFEITPDYDLNLMKAGQTLNEVTA RILLELKPVLQEFKPDVVLVHGDTATTFAASLAAYYEQIAVGHVEAGLRTGNIYSPWPEEANRKLTGALTKYHFAPTETS QQNLLQENYAEENIFVTGNTVIDALLMVKEKIEQDADLKATLAAQFPYLDENKKLILVTGHRRESFGGGFERICEALAQT AKQHPEVQILYPMHLNPNVREPVNRILGSVENVLLIEPQQYLPFIYLMDRAHIILTDSGGIQEEAPSLGKPVLLMRDTTE RPEAVAAGTVKLVGTDVEKIVSNLNTLLTDSEAYQAMSFAHNPYGDGKACQRILDSLCK >Mature_379_residues MLVSCMSKKKVLTVFGTRPEAIKMAPLVHALAADERFEAKCCVTAQHREMLDQVLELFEITPDYDLNLMKAGQTLNEVTA RILLELKPVLQEFKPDVVLVHGDTATTFAASLAAYYEQIAVGHVEAGLRTGNIYSPWPEEANRKLTGALTKYHFAPTETS QQNLLQENYAEENIFVTGNTVIDALLMVKEKIEQDADLKATLAAQFPYLDENKKLILVTGHRRESFGGGFERICEALAQT AKQHPEVQILYPMHLNPNVREPVNRILGSVENVLLIEPQQYLPFIYLMDRAHIILTDSGGIQEEAPSLGKPVLLMRDTTE RPEAVAAGTVKLVGTDVEKIVSNLNTLLTDSEAYQAMSFAHNPYGDGKACQRILDSLCK
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=368, Percent_Identity=72.2826086956522, Blast_Score=552, Evalue=1e-158,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 42123; Mature: 42123
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSCMSKKKVLTVFGTRPEAIKMAPLVHALAADERFEAKCCVTAQHREMLDQVLELFEI CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHC TPDYDLNLMKAGQTLNEVTARILLELKPVLQEFKPDVVLVHGDTATTFAASLAAYYEQIA CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH VGHVEAGLRTGNIYSPWPEEANRKLTGALTKYHFAPTETSQQNLLQENYAEENIFVTGNT HHHHHCCCEECCCCCCCCHHHCCHHHHHHHHEECCCCCCHHHHHHHHHCCCCCEEEECHH VIDALLMVKEKIEQDADLKATLAAQFPYLDENKKLILVTGHRRESFGGGFERICEALAQT HHHHHHHHHHHHCCCCCCEEEHHEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH AKQHPEVQILYPMHLNPNVREPVNRILGSVENVLLIEPQQYLPFIYLMDRAHIILTDSGG HHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHCCEEEEECCCEEEEECCCC IQEEAPSLGKPVLLMRDTTERPEAVAAGTVKLVGTDVEKIVSNLNTLLTDSEAYQAMSFA CCCCCCCCCCCEEEEECCCCCCCHHHCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHC HNPYGDGKACQRILDSLCK CCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLVSCMSKKKVLTVFGTRPEAIKMAPLVHALAADERFEAKCCVTAQHREMLDQVLELFEI CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHC TPDYDLNLMKAGQTLNEVTARILLELKPVLQEFKPDVVLVHGDTATTFAASLAAYYEQIA CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH VGHVEAGLRTGNIYSPWPEEANRKLTGALTKYHFAPTETSQQNLLQENYAEENIFVTGNT HHHHHCCCEECCCCCCCCHHHCCHHHHHHHHEECCCCCCHHHHHHHHHCCCCCEEEECHH VIDALLMVKEKIEQDADLKATLAAQFPYLDENKKLILVTGHRRESFGGGFERICEALAQT HHHHHHHHHHHHCCCCCCEEEHHEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH AKQHPEVQILYPMHLNPNVREPVNRILGSVENVLLIEPQQYLPFIYLMDRAHIILTDSGG HHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHCCEEEEECCCEEEEECCCC IQEEAPSLGKPVLLMRDTTERPEAVAAGTVKLVGTDVEKIVSNLNTLLTDSEAYQAMSFA CCCCCCCCCCCEEEEECCCCCCCHHHCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHC HNPYGDGKACQRILDSLCK CCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]