| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is wecC
Identifier: 37678526
GI number: 37678526
Start: 349990
End: 351252
Strand: Direct
Name: wecC
Synonym: VV0342
Alternate gene names: 37678526
Gene position: 349990-351252 (Clockwise)
Preceding gene: 37678525
Following gene: 37678527
Centisome position: 10.43
GC content: 44.89
Gene sequence:
>1263_bases ATGTCTTTTGAAACCATTTCAGTAATTGGCTTAGGCTATATCGGTTTACCTACCGCGGCGATGTTTGCATCACGTAAAAA GAAAGTCATTGGTGTGGATGTTAACCAACATGCGGTTGATACCATTAATCAAGGTAAGATTCATATTGTAGAGCCAGATC TAGATATGATGGTGCATGCTGCAGTCAGCGGTGGCTATTTAAAAGCAACCACCACACCAGAAGCGGCCGATGCCTTTTTG ATTGCCGTGCCAACGCCATTCTTACCTTGTGCAGAGGGTGATATTCCACCACCGGATCTCTCTTACATTGAAGCCGCCAG CAAAGCGATTGCCCCTGTACTGAAAAAAGGCGACTTGGTGATTTTAGAATCGACCTCTCCTGTTGGCGCAACCGAGAAAA TGGCCGCTTGGCTCGCAGAAGCTCGCTCTGATCTTACCTTCCCACAAACATACGGTGAAGAAGCGGATGTGAACATTGCT CATTGTCCAGAGCGCGTTTTGCCTGGCCATGTGGTGCGTGAGCTTGTTGAAAACGACCGAGTGATCGGTGGTTTAACACC TAAGTGCTCAGCGCGTGCGGTGGAACTCTATAAAACTTTTGTTCAAGGTGAATGTGTAATTACCAACGCACGTACCGCGG AAATGGCTAAACTGACCGAGAACAGCTCCCGTGATGTACAAATTGCCTTTGCCAACGAGCTATCTATCATTTGTGACAAG CTAGACATCAACGTATGGGAGCTAATTGCACTGGCAAACCGCCACCCTCGTGTTAACATTCTTCAGCCCGGCCCTGGTGT GGGCGGCCACTGTATTGCCGTTGACCCTTGGTTTATTGTGTCTAAAACACCAGAAGAAGCACAGATTATCCATATGGCAC GTAAAGTCAATGACAGCAAACCGCAGTGGGTGATAAATAAAGTGAAGTTGGCAATAGCAGACTTTTTGCAAGCCAATCCA GAAAAAACAGCTAAAGACATGACCATTGCTTGCTACGGTTTGGCCTTTAAATCTGATATTGATGACTTGCGTGAGAGTCC GTCCTTAGAAATAGCAAAGAAAGTTTCAGAATTTCATAGAGGGAAGGTTTTAGTGGTTGAACCTAACATTGCACAGCTTC CATCTGAACTAGATGGAAATGTGGATCTTGTAGACATTTCTGATACCAATTATGCTGATTTACATGTTGTGCTTGTAGGT CATAAAGAATTTGGGTCAAATCTATTCGACAAAAAAAATACGATTTTCGCAGTCAATGTCTAG
Upstream 100 bases:
>100_bases CGATTCTCTGTGCAAGTAACTTTTAAATATCTCCTAGAACCTAGAACCTAGAACCTAGAACCTAGAACAAAATTTATATA TATTTTTAGGACTCAGAAAA
Downstream 100 bases:
>100_bases CTTAAAAAGTAACATAACGAAAGGGGCTTTATGGCAAAGTATTAGTATAGTATCTACGTTTATATTAATTCCAATATCCA TTAGCTATTTGGGAAAAGAG
Product: UDP-N-acetyl-D-mannosamine dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MSFETISVIGLGYIGLPTAAMFASRKKKVIGVDVNQHAVDTINQGKIHIVEPDLDMMVHAAVSGGYLKATTTPEAADAFL IAVPTPFLPCAEGDIPPPDLSYIEAASKAIAPVLKKGDLVILESTSPVGATEKMAAWLAEARSDLTFPQTYGEEADVNIA HCPERVLPGHVVRELVENDRVIGGLTPKCSARAVELYKTFVQGECVITNARTAEMAKLTENSSRDVQIAFANELSIICDK LDINVWELIALANRHPRVNILQPGPGVGGHCIAVDPWFIVSKTPEEAQIIHMARKVNDSKPQWVINKVKLAIADFLQANP EKTAKDMTIACYGLAFKSDIDDLRESPSLEIAKKVSEFHRGKVLVVEPNIAQLPSELDGNVDLVDISDTNYADLHVVLVG HKEFGSNLFDKKNTIFAVNV
Sequences:
>Translated_420_residues MSFETISVIGLGYIGLPTAAMFASRKKKVIGVDVNQHAVDTINQGKIHIVEPDLDMMVHAAVSGGYLKATTTPEAADAFL IAVPTPFLPCAEGDIPPPDLSYIEAASKAIAPVLKKGDLVILESTSPVGATEKMAAWLAEARSDLTFPQTYGEEADVNIA HCPERVLPGHVVRELVENDRVIGGLTPKCSARAVELYKTFVQGECVITNARTAEMAKLTENSSRDVQIAFANELSIICDK LDINVWELIALANRHPRVNILQPGPGVGGHCIAVDPWFIVSKTPEEAQIIHMARKVNDSKPQWVINKVKLAIADFLQANP EKTAKDMTIACYGLAFKSDIDDLRESPSLEIAKKVSEFHRGKVLVVEPNIAQLPSELDGNVDLVDISDTNYADLHVVLVG HKEFGSNLFDKKNTIFAVNV >Mature_419_residues SFETISVIGLGYIGLPTAAMFASRKKKVIGVDVNQHAVDTINQGKIHIVEPDLDMMVHAAVSGGYLKATTTPEAADAFLI AVPTPFLPCAEGDIPPPDLSYIEAASKAIAPVLKKGDLVILESTSPVGATEKMAAWLAEARSDLTFPQTYGEEADVNIAH CPERVLPGHVVRELVENDRVIGGLTPKCSARAVELYKTFVQGECVITNARTAEMAKLTENSSRDVQIAFANELSIICDKL DINVWELIALANRHPRVNILQPGPGVGGHCIAVDPWFIVSKTPEEAQIIHMARKVNDSKPQWVINKVKLAIADFLQANPE KTAKDMTIACYGLAFKSDIDDLRESPSLEIAKKVSEFHRGKVLVVEPNIAQLPSELDGNVDLVDISDTNYADLHVVLVGH KEFGSNLFDKKNTIFAVNV
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=371, Percent_Identity=27.2237196765499, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI296040438, Length=268, Percent_Identity=26.865671641791, Blast_Score=73, Evalue=5e-13, Organism=Escherichia coli, GI48994968, Length=405, Percent_Identity=68.641975308642, Blast_Score=568, Evalue=1e-163, Organism=Caenorhabditis elegans, GI17560350, Length=382, Percent_Identity=28.7958115183246, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI17136908, Length=370, Percent_Identity=27.2972972972973, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 45590; Mature: 45459
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFETISVIGLGYIGLPTAAMFASRKKKVIGVDVNQHAVDTINQGKIHIVEPDLDMMVHA CCCEEEEEEEECCHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCEEEEECCCHHHEEEE AVSGGYLKATTTPEAADAFLIAVPTPFLPCAEGDIPPPDLSYIEAASKAIAPVLKKGDLV ECCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE ILESTSPVGATEKMAAWLAEARSDLTFPQTYGEEADVNIAHCPERVLPGHVVRELVENDR EEECCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHCCCHHCCCHHHHHHHHHCCC VIGGLTPKCSARAVELYKTFVQGECVITNARTAEMAKLTENSSRDVQIAFANELSIICDK EEECCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCEEEEEEECCEEEEEEC LDINVWELIALANRHPRVNILQPGPGVGGHCIAVDPWFIVSKTPEEAQIIHMARKVNDSK CCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHCCCCC PQWVINKVKLAIADFLQANPEKTAKDMTIACYGLAFKSDIDDLRESPSLEIAKKVSEFHR CHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEEEEHHCCHHHHHCCCCHHHHHHHHHHHC GKVLVVEPNIAQLPSELDGNVDLVDISDTNYADLHVVLVGHKEFGSNLFDKKNTIFAVNV CEEEEECCCHHHCCHHCCCCEEEEEECCCCCCEEEEEEEECHHHCCCCCCCCCCEEEEEC >Mature Secondary Structure SFETISVIGLGYIGLPTAAMFASRKKKVIGVDVNQHAVDTINQGKIHIVEPDLDMMVHA CCEEEEEEEECCHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCEEEEECCCHHHEEEE AVSGGYLKATTTPEAADAFLIAVPTPFLPCAEGDIPPPDLSYIEAASKAIAPVLKKGDLV ECCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE ILESTSPVGATEKMAAWLAEARSDLTFPQTYGEEADVNIAHCPERVLPGHVVRELVENDR EEECCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHCCCHHCCCHHHHHHHHHCCC VIGGLTPKCSARAVELYKTFVQGECVITNARTAEMAKLTENSSRDVQIAFANELSIICDK EEECCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCEEEEEEECCEEEEEEC LDINVWELIALANRHPRVNILQPGPGVGGHCIAVDPWFIVSKTPEEAQIIHMARKVNDSK CCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHCCCCC PQWVINKVKLAIADFLQANPEKTAKDMTIACYGLAFKSDIDDLRESPSLEIAKKVSEFHR CHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEEEEHHCCHHHHHCCCCHHHHHHHHHHHC GKVLVVEPNIAQLPSELDGNVDLVDISDTNYADLHVVLVGHKEFGSNLFDKKNTIFAVNV CEEEEECCCHHHCCHHCCCCEEEEEECCCCCCEEEEEEEECHHHCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]