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The map label for this gene is ycdQ [C]

Identifier: 37678483

GI number: 37678483

Start: 308484

End: 309347

Strand: Direct

Name: ycdQ [C]

Synonym: VV0299

Alternate gene names: 37678483

Gene position: 308484-309347 (Clockwise)

Preceding gene: 37678482

Following gene: 37678484

Centisome position: 9.2

GC content: 44.56

Gene sequence:

>864_bases
ATGACACGGAAAGCTTCTCTCATCATCGCGTTCTACAACAACACGCAAGCGCTTGGTTTAATTTTTAAAGCACTCTCAGC
GCAATCCTGTATGGATTTTGAAGTGGTGATTGCGGATGATGGTTCAAAAGAAGATGCGGTAACTTGGCTTGAAGAACAAA
AGAACCAAGTCCCGTTTGCTCTAAAATCTGTTTGGCACGAAGATAAAGGTTTTAGGAAAAATCGCATTTTGAACCATGCG
GTACTGGCGGCTGAGTCTGAGTATCTTATTTTTATTGATGGTGATTGCATTCCGGAAAAGCACTTCATTGAAGACCATAT
TAACAATGCACAACGAGGCAGCGTCCTTAGTGGCCGTCGAGTTGAGCTGCCTGAGCTTTTCACTCCCTTAATGCAAGCCT
GTGAAAACCCTGAAACGTTTTTCAGCCAACATAAATGGCAAATATTCCGCCAGTATTTGTTTACCTCTCCAGATGCTGAA
ACGAAGGGGCGTTGCAATCGAGGCCGTCACGTTGAAAAAGGGATCCGATTGCCTTATGCCTGGCAGCAGAAGTTGATTGG
TGGCTTTAAGCCGGCGGGCATCTTGGGATGTAATTTTTCTCTGTATAAAAGCGACTTGCTCAAAGTGAATGGGTTTGACA
TGCGCTATGAAGCACCTGCTGTAGGTGAAGATTCGGATCTGGATTACCGATTAGGCTTGATCGGTATCACCACAAGAGTA
TTGAAAGGGCTGGCCATTCAGCTGCATATTTATCACCCTTGGCTCAGTCGTACATCGCCAAATTATGAGTTATTCCTCGA
TACCATGGAGCATAAACGCTCATGGGCTGAGCAAGGTATTGATACGTTAAAGGAACATCAATGA

Upstream 100 bases:

>100_bases
ACAAAACCAATCTCCAGTTGAAAGACCAACAACCGAATTTTACCTATCTGCAGCAAGCCTTAGAGCAGATCAGCCGATTC
AGTAAATAAAAAGGCAAACT

Downstream 100 bases:

>100_bases
AAATATTAGTTACAGGTGGCGCTGGTTTTATCGGCTCTGCGGTCATCAGACACATCATCAATGACACGCGAGATAGTGTC
ATTAACTTGGACAAACTCAC

Product: putative glycosyl transferase

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase; Lipooligosaccharide Biosynthesis Glycosyltransferase; Two-Domain Glycosyltransferase; Lipooligosaccharide Glycosyltransferase; Two-Domain Glucosyltransferase; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Gt2F; Family 2 Glycosyl Transferase

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTRKASLIIAFYNNTQALGLIFKALSAQSCMDFEVVIADDGSKEDAVTWLEEQKNQVPFALKSVWHEDKGFRKNRILNHA
VLAAESEYLIFIDGDCIPEKHFIEDHINNAQRGSVLSGRRVELPELFTPLMQACENPETFFSQHKWQIFRQYLFTSPDAE
TKGRCNRGRHVEKGIRLPYAWQQKLIGGFKPAGILGCNFSLYKSDLLKVNGFDMRYEAPAVGEDSDLDYRLGLIGITTRV
LKGLAIQLHIYHPWLSRTSPNYELFLDTMEHKRSWAEQGIDTLKEHQ

Sequences:

>Translated_287_residues
MTRKASLIIAFYNNTQALGLIFKALSAQSCMDFEVVIADDGSKEDAVTWLEEQKNQVPFALKSVWHEDKGFRKNRILNHA
VLAAESEYLIFIDGDCIPEKHFIEDHINNAQRGSVLSGRRVELPELFTPLMQACENPETFFSQHKWQIFRQYLFTSPDAE
TKGRCNRGRHVEKGIRLPYAWQQKLIGGFKPAGILGCNFSLYKSDLLKVNGFDMRYEAPAVGEDSDLDYRLGLIGITTRV
LKGLAIQLHIYHPWLSRTSPNYELFLDTMEHKRSWAEQGIDTLKEHQ
>Mature_286_residues
TRKASLIIAFYNNTQALGLIFKALSAQSCMDFEVVIADDGSKEDAVTWLEEQKNQVPFALKSVWHEDKGFRKNRILNHAV
LAAESEYLIFIDGDCIPEKHFIEDHINNAQRGSVLSGRRVELPELFTPLMQACENPETFFSQHKWQIFRQYLFTSPDAET
KGRCNRGRHVEKGIRLPYAWQQKLIGGFKPAGILGCNFSLYKSDLLKVNGFDMRYEAPAVGEDSDLDYRLGLIGITTRVL
KGLAIQLHIYHPWLSRTSPNYELFLDTMEHKRSWAEQGIDTLKEHQ

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32939; Mature: 32808

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKASLIIAFYNNTQALGLIFKALSAQSCMDFEVVIADDGSKEDAVTWLEEQKNQVPFA
CCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHH
LKSVWHEDKGFRKNRILNHAVLAAESEYLIFIDGDCIPEKHFIEDHINNAQRGSVLSGRR
HHHHHHHCCCCHHHHHHHHHHEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCC
VELPELFTPLMQACENPETFFSQHKWQIFRQYLFTSPDAETKGRCNRGRHVEKGIRLPYA
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHH
WQQKLIGGFKPAGILGCNFSLYKSDLLKVNGFDMRYEAPAVGEDSDLDYRLGLIGITTRV
HHHHHHCCCCCCCEEECCHHHHHCCEEEECCCCEEECCCCCCCCCCCCEEEHHHHHHHHH
LKGLAIQLHIYHPWLSRTSPNYELFLDTMEHKRSWAEQGIDTLKEHQ
HCCEEEEEEEECCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRKASLIIAFYNNTQALGLIFKALSAQSCMDFEVVIADDGSKEDAVTWLEEQKNQVPFA
CCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHH
LKSVWHEDKGFRKNRILNHAVLAAESEYLIFIDGDCIPEKHFIEDHINNAQRGSVLSGRR
HHHHHHHCCCCHHHHHHHHHHEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCC
VELPELFTPLMQACENPETFFSQHKWQIFRQYLFTSPDAETKGRCNRGRHVEKGIRLPYA
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHH
WQQKLIGGFKPAGILGCNFSLYKSDLLKVNGFDMRYEAPAVGEDSDLDYRLGLIGITTRV
HHHHHHCCCCCCCEEECCHHHHHCCEEEECCCCEEECCCCCCCCCCCCEEEHHHHHHHHH
LKGLAIQLHIYHPWLSRTSPNYELFLDTMEHKRSWAEQGIDTLKEHQ
HCCEEEEEEEECCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA