| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678278
Identifier: 37678278
GI number: 37678278
Start: 106494
End: 106976
Strand: Direct
Name: 37678278
Synonym: VV0094
Alternate gene names: NA
Gene position: 106494-106976 (Clockwise)
Preceding gene: 37678275
Following gene: 37678281
Centisome position: 3.17
GC content: 48.24
Gene sequence:
>483_bases TTGGACCGCATTATGGCATATTGGTTGTTTAAAACTGAACCGGACACCTTTTCTATCGACACTTTACGCGTACAAAAGGT TTCATGTTGGGAGGGAGTACGAAATTATCAGGCAAGAAATATGCTGCGTGATGAGGTGAAAGAGGGCGATTGGGTGATGA TTTACCACTCCTCGTGCAAGCAGGTTGGCGTGGCAGGGATCGCCAAAGTGGTTCGTGAAGCCTATCCCGATCATTTTCAA TTTGATGCCAACAGCGACTATTACGACGCGAAATCAACGCCAGAAAACCCGCGTTGGATAATGGTCGATGTGGAATTTGT GCGCAAAACCGAACGGGTGATCCCTTTGGCGGTGTTGAAAGCCATGCCCGAGTTGGAAAACATGCCATTGGTGAAAAAGG GCAATCGCTTGTCGGTGATGCCAGTGACGGAACAAGAATGGCAGGCAATTTTAACCAAAGAAAAACTGCCGAGCCGCCGT TAG
Upstream 100 bases:
>100_bases GGGGCGCTGGTTGAACACGCTTGTAACAGCAACAGTGTCGATAGGGCGACTGGGTTTTTAAACGCCTTCATGTTATATCT TTCTCCATCTCTAAATCTGC
Downstream 100 bases:
>100_bases TCTTGCCGATGTGAAGCAAGGTTGTCTCAAATGAGTAACAGGTAAAAATAAAACGGGGCAGCGTGACGCTGCCCCGTAGT CATTGATTGTGCCGTATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MDRIMAYWLFKTEPDTFSIDTLRVQKVSCWEGVRNYQARNMLRDEVKEGDWVMIYHSSCKQVGVAGIAKVVREAYPDHFQ FDANSDYYDAKSTPENPRWIMVDVEFVRKTERVIPLAVLKAMPELENMPLVKKGNRLSVMPVTEQEWQAILTKEKLPSRR
Sequences:
>Translated_160_residues MDRIMAYWLFKTEPDTFSIDTLRVQKVSCWEGVRNYQARNMLRDEVKEGDWVMIYHSSCKQVGVAGIAKVVREAYPDHFQ FDANSDYYDAKSTPENPRWIMVDVEFVRKTERVIPLAVLKAMPELENMPLVKKGNRLSVMPVTEQEWQAILTKEKLPSRR >Mature_160_residues MDRIMAYWLFKTEPDTFSIDTLRVQKVSCWEGVRNYQARNMLRDEVKEGDWVMIYHSSCKQVGVAGIAKVVREAYPDHFQ FDANSDYYDAKSTPENPRWIMVDVEFVRKTERVIPLAVLKAMPELENMPLVKKGNRLSVMPVTEQEWQAILTKEKLPSRR
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=178, Percent_Identity=44.3820224719101, Blast_Score=153, Evalue=6e-38, Organism=Homo sapiens, GI40806221, Length=178, Percent_Identity=44.3820224719101, Blast_Score=153, Evalue=6e-38, Organism=Homo sapiens, GI7661804, Length=178, Percent_Identity=44.3820224719101, Blast_Score=153, Evalue=6e-38, Organism=Homo sapiens, GI83267859, Length=112, Percent_Identity=45.5357142857143, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI40806219, Length=112, Percent_Identity=45.5357142857143, Blast_Score=115, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18773; Mature: 18773
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRIMAYWLFKTEPDTFSIDTLRVQKVSCWEGVRNYQARNMLRDEVKEGDWVMIYHSSCK CCCEEEEEEEECCCCCEEECEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC QVGVAGIAKVVREAYPDHFQFDANSDYYDAKSTPENPRWIMVDVEFVRKTERVIPLAVLK HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH AMPELENMPLVKKGNRLSVMPVTEQEWQAILTKEKLPSRR HCCCCCCCCCEECCCEEEEEECCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDRIMAYWLFKTEPDTFSIDTLRVQKVSCWEGVRNYQARNMLRDEVKEGDWVMIYHSSCK CCCEEEEEEEECCCCCEEECEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC QVGVAGIAKVVREAYPDHFQFDANSDYYDAKSTPENPRWIMVDVEFVRKTERVIPLAVLK HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH AMPELENMPLVKKGNRLSVMPVTEQEWQAILTKEKLPSRR HCCCCCCCCCEECCCEEEEEECCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA