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The map label for this gene is yfeA [H]

Identifier: 37678275

GI number: 37678275

Start: 101773

End: 104262

Strand: Direct

Name: yfeA [H]

Synonym: VV0091

Alternate gene names: 37678275

Gene position: 101773-104262 (Clockwise)

Preceding gene: 37678274

Following gene: 37678278

Centisome position: 3.03

GC content: 51.33

Gene sequence:

>2490_bases
ATGCAGACTTTCTCGTTCTGGGTCGAGGATCTTACGCAGTTGCAAGCGATGACCGCCGATTATCGCTGGGACGCGCACAA
TACCTATTTGGTGCAGATTTTCTCCACTCAGACGGCCTCTATCACACAGGGATACGTTCGGCATCTGTTGGCGCATTTGC
CGAATGTGGACATCATTGGCCACAGTACGCAGCACACCATTTATGGCGGTGAAATTTTAACCGGCGGGTGTTTGGTGGTG
ATCGCAGAATTTTGTCACACCACACTGACTTCGGCAGTGGTGGCCTATTCAGGATCCGCAGATCTGGATGGTTACGATTT
ATGCCAAGCATTGCAATTAACCCCCACCAGCCGAGCGGTGATCAGCTTTTCCGTGCAAGTAGAGCGGCAAGATTACCCGC
TGTACGGCGCGTTCAATGATGGTATCGCAACGCCAGTATGCGGCGGTTTAGCACAAAGTGGCGCTGACGGATGTTGGGTG
CTGCACCAAGACCAGCTCTACACGCAAGCAGCGGTGGCCGTGGCTTTGCACAGTGAACAGCTTAAAGTATGGACCAGCGC
GTACTCAGAGTGGAACCCGGTTGGCATGTATCATGCCGTTACAGCCGCCGAAGGGCAGCGTCTCATTTCTCTTGGCAATA
AGCCGGCCTATGAGGTTTACAAGCGTTATTTGGCCGACGGTCATGAACTCTCGGCTAGCCATCTGCTCAATTTTCCGCTC
TACCGAGAGCGAGGCAAACACAAAGAGGTGTGTGCGGTACGTGAGATCCACCACGATGGCAGTATCTCTTTCGATAAAAC
TTGGTCTATCGGCGATCAGGTGCGTTTTTGCTACAACCACCCTTCGTTAACTCTAGAGCAGATCAAGCATGGCGTGGTGG
AGCTGGCACTGCATCAACCGGAAACGGTGTTTATCTACAACTGTGCGTCTCGGCTCGACTTTATCGATGGTTGCCAAGAA
GTGGCGCCTTTTCATCAGATCACGACCAGTCACGGCAGTTACTGCATGGGGGAGTTGTATCACGACGGTCTACAGCAAGA
GATTTTGCACCACAGTTTGACCTATCTGGCGATGCGCGAAAGCGATGAAGTGACTGAACTTAAACTGCCCGCTGATGATG
TCGACAGCACCATTTCACCGTTGTTTTGTTTGATTCGCAATGCGATTGCCGATCTCGACCAAGTGCAGTCCCGTATGGAG
TATCAACTGGAGCGGCAAACGCTGAAACTGCAAGAAAGTTATCGCCGTGACAGTCGCACCGGGTTACAAAATCGCATCGC
CCTGAAAGAGTATTTGTCGGCTATTCGCGATGATGAACATTTGTTGACCTTAAAGCTGCTCAACTTCAGCCACATCAATG
AAAAGTATGGCTATCAAGTCGGCGATGAGCTGCTGCGTATGTTATCGGTGAGTTTCTTAACTCGTCTCAGGCGGCGTTTG
GGCAAACAGGCGGATATGCAGTTGTACAGCATTGGTGTTGGCGAGTGGGCATTTGTCTTTCGTGCTGAAATTTGTGGTGA
GACCATCAAGCAGCAGTTTACCCGTTTTGCCGATGTGATTGAGCAGACCAACTTCGAGCCCTCGGGCTTGGAACAAGTGG
ATTACCTGTCGATTTCATTGTGCGGTGGCTTGGCCAGCCGGCGAGATTTTCCGCAAGCCAGTGGTGACGAACTGCTGCTC
AAAGCGATTGAGGCGCGGCGCGCTGGGGTGCGTAGCAATACCCATATTTGCAACGCCAAAGACATTCAAGTGAGTGACGA
GCGACGCAAAGAGCAACTGGCTTGGCTCAGTTGCGTCAGTCGGGCGATCTTGCAGCAAAATATCGTCACTTACGCGCAGC
CTTTGTTTCACGCCGACGGCACCACTCCCTACTCACAAGAATGTTTGGTGCGAATCGTCGAAAACGACGGACGCATTATT
TTACCAGGGCAGTTTTTGCCAATTATTGCCGACACCCACCTCTATACCCGTTTGAGCCGCCATATGATTCAAAGCACCTT
GAACTATATGCGAGAGAGAGACGGGATGTTTTCGATTAACCTTTCCCCGCAAGATCTGATGAGCGATAAAACCATGCTGC
TGTTGGAAACGGCGATTCGTCAGCTCAATGACCCTAGCCGTATCGGTTTGGAGGTGTTGGAATCGGAGCAGATCAAAGAT
TATGGCCGCATGATTGAAGTGTGCAGCCATTTCCGTCAGTTGGGGGCGCGCATCATTGTTGACGACTTTGGTTCGGGTTA
CTCCAACATCGACGAAATTATTAAGCTTGAGCCAGACATCATCAAACTCGATGGCAGTTTGATCCGCAACATCGACCAAG
ACAGCAAACAGCGCAAGATCGCCAGTCAGCTGGTGCGCTTGTGTCAGGTGCTGGAAGCGAAAACGGTGGCGGAGTTTGTC
CACAATCAGCAGGTGTGTGAAATCGCCCAAGACATGGGAGTGGATTACTTACAGGGCTATTATCTCGGCCAGCCAAGTCG
TTTATTCTGA

Upstream 100 bases:

>100_bases
GCATAACGCTGGTTTTGCTGGAAAAAGCATCATAAATTAGAATTCTCACAATTGGAACACGCAGGGTTTGCGCCCATTTG
ACGTCGGGGTTGATACGGAT

Downstream 100 bases:

>100_bases
GGGGTACGGGTTAGCCCTAGATGGAGCATCAGGGCTAACCTCTGTGTTGTTAAGGCTCGCTTTTTAGCGCGTGGCCACTG
CGATCGGCATGAAACGCCGC

Product: GGDEF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 829; Mature: 829

Protein sequence:

>829_residues
MQTFSFWVEDLTQLQAMTADYRWDAHNTYLVQIFSTQTASITQGYVRHLLAHLPNVDIIGHSTQHTIYGGEILTGGCLVV
IAEFCHTTLTSAVVAYSGSADLDGYDLCQALQLTPTSRAVISFSVQVERQDYPLYGAFNDGIATPVCGGLAQSGADGCWV
LHQDQLYTQAAVAVALHSEQLKVWTSAYSEWNPVGMYHAVTAAEGQRLISLGNKPAYEVYKRYLADGHELSASHLLNFPL
YRERGKHKEVCAVREIHHDGSISFDKTWSIGDQVRFCYNHPSLTLEQIKHGVVELALHQPETVFIYNCASRLDFIDGCQE
VAPFHQITTSHGSYCMGELYHDGLQQEILHHSLTYLAMRESDEVTELKLPADDVDSTISPLFCLIRNAIADLDQVQSRME
YQLERQTLKLQESYRRDSRTGLQNRIALKEYLSAIRDDEHLLTLKLLNFSHINEKYGYQVGDELLRMLSVSFLTRLRRRL
GKQADMQLYSIGVGEWAFVFRAEICGETIKQQFTRFADVIEQTNFEPSGLEQVDYLSISLCGGLASRRDFPQASGDELLL
KAIEARRAGVRSNTHICNAKDIQVSDERRKEQLAWLSCVSRAILQQNIVTYAQPLFHADGTTPYSQECLVRIVENDGRII
LPGQFLPIIADTHLYTRLSRHMIQSTLNYMRERDGMFSINLSPQDLMSDKTMLLLETAIRQLNDPSRIGLEVLESEQIKD
YGRMIEVCSHFRQLGARIIVDDFGSGYSNIDEIIKLEPDIIKLDGSLIRNIDQDSKQRKIASQLVRLCQVLEAKTVAEFV
HNQQVCEIAQDMGVDYLQGYYLGQPSRLF

Sequences:

>Translated_829_residues
MQTFSFWVEDLTQLQAMTADYRWDAHNTYLVQIFSTQTASITQGYVRHLLAHLPNVDIIGHSTQHTIYGGEILTGGCLVV
IAEFCHTTLTSAVVAYSGSADLDGYDLCQALQLTPTSRAVISFSVQVERQDYPLYGAFNDGIATPVCGGLAQSGADGCWV
LHQDQLYTQAAVAVALHSEQLKVWTSAYSEWNPVGMYHAVTAAEGQRLISLGNKPAYEVYKRYLADGHELSASHLLNFPL
YRERGKHKEVCAVREIHHDGSISFDKTWSIGDQVRFCYNHPSLTLEQIKHGVVELALHQPETVFIYNCASRLDFIDGCQE
VAPFHQITTSHGSYCMGELYHDGLQQEILHHSLTYLAMRESDEVTELKLPADDVDSTISPLFCLIRNAIADLDQVQSRME
YQLERQTLKLQESYRRDSRTGLQNRIALKEYLSAIRDDEHLLTLKLLNFSHINEKYGYQVGDELLRMLSVSFLTRLRRRL
GKQADMQLYSIGVGEWAFVFRAEICGETIKQQFTRFADVIEQTNFEPSGLEQVDYLSISLCGGLASRRDFPQASGDELLL
KAIEARRAGVRSNTHICNAKDIQVSDERRKEQLAWLSCVSRAILQQNIVTYAQPLFHADGTTPYSQECLVRIVENDGRII
LPGQFLPIIADTHLYTRLSRHMIQSTLNYMRERDGMFSINLSPQDLMSDKTMLLLETAIRQLNDPSRIGLEVLESEQIKD
YGRMIEVCSHFRQLGARIIVDDFGSGYSNIDEIIKLEPDIIKLDGSLIRNIDQDSKQRKIASQLVRLCQVLEAKTVAEFV
HNQQVCEIAQDMGVDYLQGYYLGQPSRLF
>Mature_829_residues
MQTFSFWVEDLTQLQAMTADYRWDAHNTYLVQIFSTQTASITQGYVRHLLAHLPNVDIIGHSTQHTIYGGEILTGGCLVV
IAEFCHTTLTSAVVAYSGSADLDGYDLCQALQLTPTSRAVISFSVQVERQDYPLYGAFNDGIATPVCGGLAQSGADGCWV
LHQDQLYTQAAVAVALHSEQLKVWTSAYSEWNPVGMYHAVTAAEGQRLISLGNKPAYEVYKRYLADGHELSASHLLNFPL
YRERGKHKEVCAVREIHHDGSISFDKTWSIGDQVRFCYNHPSLTLEQIKHGVVELALHQPETVFIYNCASRLDFIDGCQE
VAPFHQITTSHGSYCMGELYHDGLQQEILHHSLTYLAMRESDEVTELKLPADDVDSTISPLFCLIRNAIADLDQVQSRME
YQLERQTLKLQESYRRDSRTGLQNRIALKEYLSAIRDDEHLLTLKLLNFSHINEKYGYQVGDELLRMLSVSFLTRLRRRL
GKQADMQLYSIGVGEWAFVFRAEICGETIKQQFTRFADVIEQTNFEPSGLEQVDYLSISLCGGLASRRDFPQASGDELLL
KAIEARRAGVRSNTHICNAKDIQVSDERRKEQLAWLSCVSRAILQQNIVTYAQPLFHADGTTPYSQECLVRIVENDGRII
LPGQFLPIIADTHLYTRLSRHMIQSTLNYMRERDGMFSINLSPQDLMSDKTMLLLETAIRQLNDPSRIGLEVLESEQIKD
YGRMIEVCSHFRQLGARIIVDDFGSGYSNIDEIIKLEPDIIKLDGSLIRNIDQDSKQRKIASQLVRLCQVLEAKTVAEFV
HNQQVCEIAQDMGVDYLQGYYLGQPSRLF

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082096, Length=257, Percent_Identity=29.5719844357977, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1788849, Length=245, Percent_Identity=28.5714285714286, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI1790496, Length=249, Percent_Identity=26.5060240963855, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1787541, Length=426, Percent_Identity=25.3521126760563, Blast_Score=94, Evalue=4e-20,
Organism=Escherichia coli, GI87081743, Length=225, Percent_Identity=28.4444444444444, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI87081921, Length=450, Percent_Identity=21.5555555555556, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI87081980, Length=249, Percent_Identity=25.3012048192771, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI226510982, Length=273, Percent_Identity=25.2747252747253, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87081845, Length=236, Percent_Identity=25.8474576271186, Blast_Score=70, Evalue=7e-13,
Organism=Escherichia coli, GI1786507, Length=237, Percent_Identity=24.8945147679325, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787410, Length=197, Percent_Identity=26.3959390862944, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1787055, Length=496, Percent_Identity=21.5725806451613, Blast_Score=64, Evalue=6e-11,
Organism=Escherichia coli, GI1788502, Length=239, Percent_Identity=22.1757322175732, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR007895 [H]

Pfam domain/function: PF00563 EAL; PF05231 MASE1 [H]

EC number: NA

Molecular weight: Translated: 93887; Mature: 93887

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTFSFWVEDLTQLQAMTADYRWDAHNTYLVQIFSTQTASITQGYVRHLLAHLPNVDIIG
CCHHHHHHHHHHHHHHHHHCCEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEC
HSTQHTIYGGEILTGGCLVVIAEFCHTTLTSAVVAYSGSADLDGYDLCQALQLTPTSRAV
CCCCCEEECCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEE
ISFSVQVERQDYPLYGAFNDGIATPVCGGLAQSGADGCWVLHQDQLYTQAAVAVALHSEQ
EEEEEEEECCCCCEEECCCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHH
LKVWTSAYSEWNPVGMYHAVTAAEGQRLISLGNKPAYEVYKRYLADGHELSASHLLNFPL
HHHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCH
YRERGKHKEVCAVREIHHDGSISFDKTWSIGDQVRFCYNHPSLTLEQIKHGVVELALHQP
HHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
ETVFIYNCASRLDFIDGCQEVAPFHQITTSHGSYCMGELYHDGLQQEILHHSLTYLAMRE
CEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SDEVTELKLPADDVDSTISPLFCLIRNAIADLDQVQSRMEYQLERQTLKLQESYRRDSRT
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLQNRIALKEYLSAIRDDEHLLTLKLLNFSHINEKYGYQVGDELLRMLSVSFLTRLRRRL
CHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHH
GKQADMQLYSIGVGEWAFVFRAEICGETIKQQFTRFADVIEQTNFEPSGLEQVDYLSISL
CCHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHHH
CGGLASRRDFPQASGDELLLKAIEARRAGVRSNTHICNAKDIQVSDERRKEQLAWLSCVS
HCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
RAILQQNIVTYAQPLFHADGTTPYSQECLVRIVENDGRIILPGQFLPIIADTHLYTRLSR
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCEEEECCCCCCHHCCHHHHHHHHH
HMIQSTLNYMRERDGMFSINLSPQDLMSDKTMLLLETAIRQLNDPSRIGLEVLESEQIKD
HHHHHHHHHHHHCCCEEEECCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YGRMIEVCSHFRQLGARIIVDDFGSGYSNIDEIIKLEPDIIKLDGSLIRNIDQDSKQRKI
HHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHCCCCEEEECCHHHHCCCCCHHHHHH
ASQLVRLCQVLEAKTVAEFVHNQQVCEIAQDMGVDYLQGYYLGQPSRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEECCCCCCCC
>Mature Secondary Structure
MQTFSFWVEDLTQLQAMTADYRWDAHNTYLVQIFSTQTASITQGYVRHLLAHLPNVDIIG
CCHHHHHHHHHHHHHHHHHCCEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEC
HSTQHTIYGGEILTGGCLVVIAEFCHTTLTSAVVAYSGSADLDGYDLCQALQLTPTSRAV
CCCCCEEECCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEE
ISFSVQVERQDYPLYGAFNDGIATPVCGGLAQSGADGCWVLHQDQLYTQAAVAVALHSEQ
EEEEEEEECCCCCEEECCCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHH
LKVWTSAYSEWNPVGMYHAVTAAEGQRLISLGNKPAYEVYKRYLADGHELSASHLLNFPL
HHHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCH
YRERGKHKEVCAVREIHHDGSISFDKTWSIGDQVRFCYNHPSLTLEQIKHGVVELALHQP
HHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
ETVFIYNCASRLDFIDGCQEVAPFHQITTSHGSYCMGELYHDGLQQEILHHSLTYLAMRE
CEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SDEVTELKLPADDVDSTISPLFCLIRNAIADLDQVQSRMEYQLERQTLKLQESYRRDSRT
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLQNRIALKEYLSAIRDDEHLLTLKLLNFSHINEKYGYQVGDELLRMLSVSFLTRLRRRL
CHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHH
GKQADMQLYSIGVGEWAFVFRAEICGETIKQQFTRFADVIEQTNFEPSGLEQVDYLSISL
CCHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHHH
CGGLASRRDFPQASGDELLLKAIEARRAGVRSNTHICNAKDIQVSDERRKEQLAWLSCVS
HCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
RAILQQNIVTYAQPLFHADGTTPYSQECLVRIVENDGRIILPGQFLPIIADTHLYTRLSR
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCEEEECCCCCCHHCCHHHHHHHHH
HMIQSTLNYMRERDGMFSINLSPQDLMSDKTMLLLETAIRQLNDPSRIGLEVLESEQIKD
HHHHHHHHHHHHCCCEEEECCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YGRMIEVCSHFRQLGARIIVDDFGSGYSNIDEIIKLEPDIIKLDGSLIRNIDQDSKQRKI
HHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHCCCCEEEECCHHHHCCCCCHHHHHH
ASQLVRLCQVLEAKTVAEFVHNQQVCEIAQDMGVDYLQGYYLGQPSRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 2201776 [H]