Click here to switch to the map view.

The map label for this gene is yigB [H]

Identifier: 37678274

GI number: 37678274

Start: 100927

End: 101643

Strand: Direct

Name: yigB [H]

Synonym: VV0090

Alternate gene names: 37678274

Gene position: 100927-101643 (Clockwise)

Preceding gene: 37678273

Following gene: 37678275

Centisome position: 3.01

GC content: 53.7

Gene sequence:

>717_bases
ATGAAACATTACCGCCCGCTGCAGCCGATCGCGGCAATGACCTTCGACTTAGACGATACCTTGTATGATAACCGTCCGGT
GATTGAACGCTTGGAGCGTGAGGTGCTGGCGTGGCTCGCCGCGCAGCATCCTGCGACACAAGTGATGAGTCATAGCGATT
GGTCTCAGTTAAAGCGTGAAGTGGCGGCAAGCTCCCCGCAATTGCGCAGTGATGTGACGCAGCTGCGTCATCAGCAACTG
ACCCAGGCATTTTTGCGTCTTGGGTACGATGTGGCGGCGGCGCAGCAAGCTGCGGATGAGGGGGTCGCGGTGGCGTTGTA
TTGGCGCAGCCAGTTGGTAGTGCCATCCGAAACGCACCGTGTCATGAGATTATTGGCGGACAAACTGCCTTTAGTGGCGA
TCACTAATGGTAACGTGGATGTCGCGGCGATCGGCCTGGATGGCTACTTTCAAGCCATCTTAAAAGCGGGTCCTGATGGA
GTGGCTAAACCAGCGAGCGATCTGTTCCAGCGTGCGGAGCAGATCTTACAGTTGCCGGCGCAGCGCATTCTCCATGTTGG
CGACCACTTGCTCTCGGATGTGCACGGCGCTAACTTGCATGGTTTTATGTCGTGCTGGATCAATCCAAAGCAGATCAACC
TACGTCAGCAAGCCAAAGCCAAAACTCTTCCTAATTTAGAAATCAATGAATTAAGTCAGTTACTCCTACTTTTGTAA

Upstream 100 bases:

>100_bases
AAATCTATACGCACCTCGATTTCCAACACTTGGCCGATGTATATGATCAAGCGCACCCAAGGGCGCGTAAAAAGTCTTCT
CAACACAAAGAGGAAGATGA

Downstream 100 bases:

>100_bases
GCCCGCTCTCAATCCTATCAATCTTCCCCGCATAACGCTGGTTTTGCTGGAAAAAGCATCATAAATTAGAATTCTCACAA
TTGGAACACGCAGGGTTTGC

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKHYRPLQPIAAMTFDLDDTLYDNRPVIERLEREVLAWLAAQHPATQVMSHSDWSQLKREVAASSPQLRSDVTQLRHQQL
TQAFLRLGYDVAAAQQAADEGVAVALYWRSQLVVPSETHRVMRLLADKLPLVAITNGNVDVAAIGLDGYFQAILKAGPDG
VAKPASDLFQRAEQILQLPAQRILHVGDHLLSDVHGANLHGFMSCWINPKQINLRQQAKAKTLPNLEINELSQLLLLL

Sequences:

>Translated_238_residues
MKHYRPLQPIAAMTFDLDDTLYDNRPVIERLEREVLAWLAAQHPATQVMSHSDWSQLKREVAASSPQLRSDVTQLRHQQL
TQAFLRLGYDVAAAQQAADEGVAVALYWRSQLVVPSETHRVMRLLADKLPLVAITNGNVDVAAIGLDGYFQAILKAGPDG
VAKPASDLFQRAEQILQLPAQRILHVGDHLLSDVHGANLHGFMSCWINPKQINLRQQAKAKTLPNLEINELSQLLLLL
>Mature_238_residues
MKHYRPLQPIAAMTFDLDDTLYDNRPVIERLEREVLAWLAAQHPATQVMSHSDWSQLKREVAASSPQLRSDVTQLRHQQL
TQAFLRLGYDVAAAQQAADEGVAVALYWRSQLVVPSETHRVMRLLADKLPLVAITNGNVDVAAIGLDGYFQAILKAGPDG
VAKPASDLFQRAEQILQLPAQRILHVGDHLLSDVHGANLHGFMSCWINPKQINLRQQAKAKTLPNLEINELSQLLLLL

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjG [H]

Homologues:

Organism=Escherichia coli, GI2367295, Length=238, Percent_Identity=44.1176470588235, Blast_Score=204, Evalue=6e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26554; Mature: 26554

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHYRPLQPIAAMTFDLDDTLYDNRPVIERLEREVLAWLAAQHPATQVMSHSDWSQLKRE
CCCCCCCCHHHHHEECCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHH
VAASSPQLRSDVTQLRHQQLTQAFLRLGYDVAAAQQAADEGVAVALYWRSQLVVPSETHR
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCEECCCHHHHH
VMRLLADKLPLVAITNGNVDVAAIGLDGYFQAILKAGPDGVAKPASDLFQRAEQILQLPA
HHHHHHHCCCEEEEECCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
QRILHVGDHLLSDVHGANLHGFMSCWINPKQINLRQQAKAKTLPNLEINELSQLLLLL
HHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKHYRPLQPIAAMTFDLDDTLYDNRPVIERLEREVLAWLAAQHPATQVMSHSDWSQLKRE
CCCCCCCCHHHHHEECCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHH
VAASSPQLRSDVTQLRHQQLTQAFLRLGYDVAAAQQAADEGVAVALYWRSQLVVPSETHR
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCEECCCHHHHH
VMRLLADKLPLVAITNGNVDVAAIGLDGYFQAILKAGPDGVAKPASDLFQRAEQILQLPA
HHHHHHHCCCEEEEECCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
QRILHVGDHLLSDVHGANLHGFMSCWINPKQINLRQQAKAKTLPNLEINELSQLLLLL
HHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]