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The map label for this gene is yraN [C]

Identifier: 37523323

GI number: 37523323

Start: 3963677

End: 3964057

Strand: Reverse

Name: yraN [C]

Synonym: gll3754

Alternate gene names: 37523323

Gene position: 3964057-3963677 (Counterclockwise)

Preceding gene: 37523327

Following gene: 37523322

Centisome position: 85.08

GC content: 70.08

Gene sequence:

>381_bases
ATGGATCGGCGGCACCGCTTCGCTTTACAGGCAGAAATATGGGTGGCCGACCACCTGGCGGCGCAGGGAGGGCTGGTGCT
CGCTCGGCGCTGGCGCTGCCGGGGGGGCGAGATCGACTTGGTAGTTCGGCTGGGTGGGGTGCTCTGCTTCGTCGAGGTCA
AAGCCCGCGGGGGCAACAGTTGGGACAGCGCCGGATGGGAGGCGGTGGGGGCGGTCAAACAGCGGCGGCTGCTTCTGGCC
GCGGCGCTCTTCCTGGCTGCGCACCCCGAATTGGCGCGCTCCGTGTGCCGCTTCGACGTGGCGCTGGTGGGGCGCGACCC
GGGCGGTGGCGTGCGGTTGGTGGCCTATATCGCCGGTGCTTTTGAAGGCAGCGGGCGCTAG

Upstream 100 bases:

>100_bases
TCTGTTGTCCGGCGGCGGGATAGTGTCCGGCGTCATCTAAAAAGCGCCGCTGGACCGGGGCCGCAGGGATACTGTACCGC
ATCCCCTCCCCGGGTATGCG

Downstream 100 bases:

>100_bases
GATCGAGCCGCAGCGCTTGGGAGACCCTGATGATCAAGGTGCTCGTGCCTTTGGCGGAGGGCTTCGAAGAAATCGAAGCG
GTGACGATTATCGACGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MDRRHRFALQAEIWVADHLAAQGGLVLARRWRCRGGEIDLVVRLGGVLCFVEVKARGGNSWDSAGWEAVGAVKQRRLLLA
AALFLAAHPELARSVCRFDVALVGRDPGGGVRLVAYIAGAFEGSGR

Sequences:

>Translated_126_residues
MDRRHRFALQAEIWVADHLAAQGGLVLARRWRCRGGEIDLVVRLGGVLCFVEVKARGGNSWDSAGWEAVGAVKQRRLLLA
AALFLAAHPELARSVCRFDVALVGRDPGGGVRLVAYIAGAFEGSGR
>Mature_126_residues
MDRRHRFALQAEIWVADHLAAQGGLVLARRWRCRGGEIDLVVRLGGVLCFVEVKARGGNSWDSAGWEAVGAVKQRRLLLA
AALFLAAHPELARSVCRFDVALVGRDPGGGVRLVAYIAGAFEGSGR

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3754_GLOVI (Q7NEX4)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_926700.1
- ProteinModelPortal:   Q7NEX4
- GeneID:   2602158
- GenomeReviews:   BA000045_GR
- KEGG:   gvi:gll3754
- NMPDR:   fig|251221.1.peg.3754
- HOGENOM:   HBG710155
- OMA:   WIVNAFE
- BioCyc:   GVIO251221:GLL3754-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13592; Mature: 13592

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRHRFALQAEIWVADHLAAQGGLVLARRWRCRGGEIDLVVRLGGVLCFVEVKARGGNS
CCCCCEEEEEEEEEEHHHHHCCCCEEEEEEECCCCCCEEEEEEECCEEEEEEEEECCCCC
WDSAGWEAVGAVKQRRLLLAAALFLAAHPELARSVCRFDVALVGRDPGGGVRLVAYIAGA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEECCCCCCEEEEEEEECC
FEGSGR
CCCCCC
>Mature Secondary Structure
MDRRHRFALQAEIWVADHLAAQGGLVLARRWRCRGGEIDLVVRLGGVLCFVEVKARGGNS
CCCCCEEEEEEEEEEHHHHHCCCCEEEEEEECCCCCCEEEEEEECCEEEEEEEEECCCCC
WDSAGWEAVGAVKQRRLLLAAALFLAAHPELARSVCRFDVALVGRDPGGGVRLVAYIAGA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEECCCCCCEEEEEEEECC
FEGSGR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292