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The map label for this gene is pheT

Identifier: 37522495

GI number: 37522495

Start: 3121496

End: 3123853

Strand: Reverse

Name: pheT

Synonym: gvip406

Alternate gene names: 37522495

Gene position: 3123853-3121496 (Counterclockwise)

Preceding gene: 37522499

Following gene: 37522493

Centisome position: 67.05

GC content: 66.62

Gene sequence:

>2358_bases
ATGCGCGTCTCCTTCAACTGGCTTCAAGAGTACGTCGAATTTGATTTCACGCCGTCCGAACTGGCCGAGAAGCTGACCAT
GGCGGGCTTCGAAGTTGAACATGTCGAAGATCGGCGCACCTGGGCGGCCGGGGTGGTGGTGGGCCGGGTGCTCGAGTGCG
CGCCCCATCCCCAGGCCGACCGGCTGCACGTCTGCCGGGTCGATATCGGCACGGGCCGATTGCTCAACATCGTCTGCGGC
GCTCCCAACGCCCGCGCCGGCATCTACGCGCCGGTGGCCCCGGTCGGCACGTATCTACCGATCAAAGACTTGAAACTGCG
CGCCGCGAGCATCCGGGGTATGCCGAGCGAAGGCATGCTCTGCTCACTCGAAGAGTTGGGCCTCGAAAAAGCCTCCGAGG
GCATTCATATCTTTCCCGAGGCGTCGCTGCCCCTTGGCCTCGACGTGGGACCGCTGCTCGGCCTCGACGACGCGATTCTC
GAAGTGGCCTCGACCGCCAACCGCGCCGACGCCCTCAGCATGGTGGGGATCGCCCGCGAGGTGGCGGCCCTGACCGGCGG
CATCTTGCGCCTGCCCCTGGTCGATGCGCCCCTGGTGCCCAGGGGCGATCTGGCCGCCCGGATCGCCGAGCCGGAAGCCT
GCCCGGTCTATACCGCCACCTTATTAGAGGAAGTCGCCGTCGGTCCTGCTCCCGACTGGCTGCGCGAGCGCCTCGAAAAA
GCCGGCATGCGCCCCATCAACAATGTCGTCGATGTCACCAACTACGTGCTGCTCGAATGGGGCCAGCCGCTGCACGCCTT
CGATGCCGACCGGCTCGCCGCCGGTACCCTGGGGGTGCGCTTCGCCCACAAAGGCGAGCAGCTGGTCACCCTGGATGGAA
CCGAGCGGCCCTTGACACCCGCAAATCTGCTCATCACCGCCGGCGAGCGGCCGGTTGCCCTCGCCGGGGTGATGGGGGGC
GAGGCCACCGAGGTGGGCGGACAGACCCGGCGCATCGTGCTGGAGGCGGCCATCTTCGACCCGCCCGCGATTCGCCGCTC
CGCCCGCGTCTTTGCGCTGCGCACCGAGGCTTCGGCGCGCTACGAACGTGGTGTGGACGCCTCCGCCCTCGAACACGCCC
TCGGCCGCGCTCTGCAACTATTGGCCGATTGCGCAGGGGCGCGCGCCGTCGTCCAGGCAACCGACGATTACCGCCGTCGC
GAGAACCGCGTGGTGTCCCTGCGGCCCGAGCGCCTCGCCCAGATCCTGGGCGAAGACATCCCGGATGCGGAGATTGCCCG
GGTGCTCAAGAACCTCGGCTTCGACGTACAGACGGGGCCGCAGGAATTCGCCGTCACCGTACCGGGTCATCGATTGCGCG
ATATCGAGCGCGAAATCGATCTCATCGAAGAAGTGGCGCGCGTCGTCGGTTACGACCGCTTCGCGCCCACCCTGCCGCCC
CCCGCCGACGGCGGCTATCTGCCTTTTGAGGACTTTATCGAGCGGCGGGTGCGCTCGCTCTGTCAGGGAGCGGGGCTCAC
CGAGGTGGTGACTTACTCGCTCGCCCCGGACCGCGACCAGCAGCCGGTGGTGCTCAGCAATCCGCTGAGCGCCGAACTCA
ACAGCCTGCGCACCAATTTGATCGACGGCTTGCTTGAGATCCTGCGCTTCAACCGCTCCCAGGGAAACATGCCCTTTCAC
GCCTTCGAAGTGGGGGTCGTCTTTTTGCGCTCCGACGAGGGCATCTTCGAGTCGGGCCGGCTTGGGGCGGTGATGTGCGG
CGAGCCTGCGGTGGGCGACTGGCAAAAACTCACCCCCCCCTTCGATTGGTTCGCAGCCAAAGGCGTGCTTGCGGCGATTT
TGCAGCCGTGGCAGATCGAAGTCGAATACCAGGCCGACCGCCGGGACGAGCGGCTGCACCCGGGGCGAACGGCTTCGCTG
TGGGTATCGGGCGAGCGGCTCGGCACCCTCGGCCAGCTTCACCCCCGTCTGGCTTCCCGACTGGATCTACCCGAGCAGAC
GTTTGTATTCGAGATCGATCTCGATTTTTTGATCGACCTGGTGCGCGAGCGGCCGGTCGAATTTCGTTCCTTCTCCCCCT
TTCCTCCGGCGGCGCGGGACTTGTCGTTCTATGCCCGCGAGGCGCTCACCGTCTTCGAATTCGAGCGGCTCATCCGCGAG
CAGGGCGAACCGCTGCTCGAATCGGTCGCGCTGCTCGATGAATTCAAGGGCCAGGGGGTGCCGGAGGGCTGCCGCTCCCT
CGCCTTTCGGATGGTTTACCGCAGCGACCACACGCTCACCGAAGAGGAGATCACCGCCGTCCACCAGCGCGTCCGGCAGG
CTCTGGCCGAGCGCTACTCGGTCGATCTGCGCAGCTGA

Upstream 100 bases:

>100_bases
AATCTCAAACTGAAGCTTGAAGGCCGCCCCGCAGGTGCATAGTCGGGTGCCCCGGCAAACTGATAGCATCGAAACGCTCC
ATTCAACCGGCCTGCATCCC

Downstream 100 bases:

>100_bases
TGGAACGCGACTATTTTGCCCTCCTTGAAACAATCGAGCAAAAGCGAGCGGTCCAGGGCTGAAGAGATTCAGTCCTGGAC
CGCTCGATTGCCGTGTTCCT

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS

Number of amino acids: Translated: 785; Mature: 785

Protein sequence:

>785_residues
MRVSFNWLQEYVEFDFTPSELAEKLTMAGFEVEHVEDRRTWAAGVVVGRVLECAPHPQADRLHVCRVDIGTGRLLNIVCG
APNARAGIYAPVAPVGTYLPIKDLKLRAASIRGMPSEGMLCSLEELGLEKASEGIHIFPEASLPLGLDVGPLLGLDDAIL
EVASTANRADALSMVGIAREVAALTGGILRLPLVDAPLVPRGDLAARIAEPEACPVYTATLLEEVAVGPAPDWLRERLEK
AGMRPINNVVDVTNYVLLEWGQPLHAFDADRLAAGTLGVRFAHKGEQLVTLDGTERPLTPANLLITAGERPVALAGVMGG
EATEVGGQTRRIVLEAAIFDPPAIRRSARVFALRTEASARYERGVDASALEHALGRALQLLADCAGARAVVQATDDYRRR
ENRVVSLRPERLAQILGEDIPDAEIARVLKNLGFDVQTGPQEFAVTVPGHRLRDIEREIDLIEEVARVVGYDRFAPTLPP
PADGGYLPFEDFIERRVRSLCQGAGLTEVVTYSLAPDRDQQPVVLSNPLSAELNSLRTNLIDGLLEILRFNRSQGNMPFH
AFEVGVVFLRSDEGIFESGRLGAVMCGEPAVGDWQKLTPPFDWFAAKGVLAAILQPWQIEVEYQADRRDERLHPGRTASL
WVSGERLGTLGQLHPRLASRLDLPEQTFVFEIDLDFLIDLVRERPVEFRSFSPFPPAARDLSFYAREALTVFEFERLIRE
QGEPLLESVALLDEFKGQGVPEGCRSLAFRMVYRSDHTLTEEEITAVHQRVRQALAERYSVDLRS

Sequences:

>Translated_785_residues
MRVSFNWLQEYVEFDFTPSELAEKLTMAGFEVEHVEDRRTWAAGVVVGRVLECAPHPQADRLHVCRVDIGTGRLLNIVCG
APNARAGIYAPVAPVGTYLPIKDLKLRAASIRGMPSEGMLCSLEELGLEKASEGIHIFPEASLPLGLDVGPLLGLDDAIL
EVASTANRADALSMVGIAREVAALTGGILRLPLVDAPLVPRGDLAARIAEPEACPVYTATLLEEVAVGPAPDWLRERLEK
AGMRPINNVVDVTNYVLLEWGQPLHAFDADRLAAGTLGVRFAHKGEQLVTLDGTERPLTPANLLITAGERPVALAGVMGG
EATEVGGQTRRIVLEAAIFDPPAIRRSARVFALRTEASARYERGVDASALEHALGRALQLLADCAGARAVVQATDDYRRR
ENRVVSLRPERLAQILGEDIPDAEIARVLKNLGFDVQTGPQEFAVTVPGHRLRDIEREIDLIEEVARVVGYDRFAPTLPP
PADGGYLPFEDFIERRVRSLCQGAGLTEVVTYSLAPDRDQQPVVLSNPLSAELNSLRTNLIDGLLEILRFNRSQGNMPFH
AFEVGVVFLRSDEGIFESGRLGAVMCGEPAVGDWQKLTPPFDWFAAKGVLAAILQPWQIEVEYQADRRDERLHPGRTASL
WVSGERLGTLGQLHPRLASRLDLPEQTFVFEIDLDFLIDLVRERPVEFRSFSPFPPAARDLSFYAREALTVFEFERLIRE
QGEPLLESVALLDEFKGQGVPEGCRSLAFRMVYRSDHTLTEEEITAVHQRVRQALAERYSVDLRS
>Mature_785_residues
MRVSFNWLQEYVEFDFTPSELAEKLTMAGFEVEHVEDRRTWAAGVVVGRVLECAPHPQADRLHVCRVDIGTGRLLNIVCG
APNARAGIYAPVAPVGTYLPIKDLKLRAASIRGMPSEGMLCSLEELGLEKASEGIHIFPEASLPLGLDVGPLLGLDDAIL
EVASTANRADALSMVGIAREVAALTGGILRLPLVDAPLVPRGDLAARIAEPEACPVYTATLLEEVAVGPAPDWLRERLEK
AGMRPINNVVDVTNYVLLEWGQPLHAFDADRLAAGTLGVRFAHKGEQLVTLDGTERPLTPANLLITAGERPVALAGVMGG
EATEVGGQTRRIVLEAAIFDPPAIRRSARVFALRTEASARYERGVDASALEHALGRALQLLADCAGARAVVQATDDYRRR
ENRVVSLRPERLAQILGEDIPDAEIARVLKNLGFDVQTGPQEFAVTVPGHRLRDIEREIDLIEEVARVVGYDRFAPTLPP
PADGGYLPFEDFIERRVRSLCQGAGLTEVVTYSLAPDRDQQPVVLSNPLSAELNSLRTNLIDGLLEILRFNRSQGNMPFH
AFEVGVVFLRSDEGIFESGRLGAVMCGEPAVGDWQKLTPPFDWFAAKGVLAAILQPWQIEVEYQADRRDERLHPGRTASL
WVSGERLGTLGQLHPRLASRLDLPEQTFVFEIDLDFLIDLVRERPVEFRSFSPFPPAARDLSFYAREALTVFEFERLIRE
QGEPLLESVALLDEFKGQGVPEGCRSLAFRMVYRSDHTLTEEEITAVHQRVRQALAERYSVDLRS

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain

Homologues:

Organism=Escherichia coli, GI1788006, Length=807, Percent_Identity=38.909541511772, Blast_Score=489, Evalue=1e-139,
Organism=Drosophila melanogaster, GI21355211, Length=393, Percent_Identity=23.4096692111959, Blast_Score=76, Evalue=9e-14,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SYFB_GLOVI (Q7NCQ2)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_925872.1
- ProteinModelPortal:   Q7NCQ2
- SMR:   Q7NCQ2
- GeneID:   2601327
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.2926
- HOGENOM:   HBG399638
- OMA:   ADKLRVC
- ProtClustDB:   PRK00629
- BioCyc:   GVIO251221:GLL2926-MONOMER
- BRENDA:   6.1.1.20
- GO:   GO:0005737
- HAMAP:   MF_00283
- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547
- Gene3D:   G3DSA:3.50.40.10
- Gene3D:   G3DSA:3.30.56.20
- Gene3D:   G3DSA:3.30.70.380
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00873
- SMART:   SM00874
- SMART:   SM00896
- TIGRFAMs:   TIGR00472

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind; SSF56037 B3_4; SSF54991 Fdx_AntiC_bd; SSF50249 Nucleic_acid_OB; SSF46955 Putativ_DNA_bind

EC number: =6.1.1.20

Molecular weight: Translated: 86448; Mature: 86448

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS51483 B5; PS51447 FDX_ACB; PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSFNWLQEYVEFDFTPSELAEKLTMAGFEVEHVEDRRTWAAGVVVGRVLECAPHPQAD
CCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RLHVCRVDIGTGRLLNIVCGAPNARAGIYAPVAPVGTYLPIKDLKLRAASIRGMPSEGML
CEEEEEEECCCCCEEEEEECCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCE
CSLEELGLEKASEGIHIFPEASLPLGLDVGPLLGLDDAILEVASTANRADALSMVGIARE
EEHHHHCHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
VAALTGGILRLPLVDAPLVPRGDLAARIAEPEACPVYTATLLEEVAVGPAPDWLRERLEK
HHHHHCCEEEECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
AGMRPINNVVDVTNYVLLEWGQPLHAFDADRLAAGTLGVRFAHKGEQLVTLDGTERPLTP
CCCCCHHHHHHHHHHEEEECCCCHHHCCCHHHHHHHHCEEEECCCCEEEEECCCCCCCCC
ANLLITAGERPVALAGVMGGEATEVGGQTRRIVLEAAIFDPPAIRRSARVFALRTEASAR
CCEEEECCCCCEEEEEECCCCCHHCCCCCEEEEEEEECCCCHHHHCCCEEEEEECCHHHH
YERGVDASALEHALGRALQLLADCAGARAVVQATDDYRRRENRVVSLRPERLAQILGEDI
HHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCEEEECHHHHHHHHCCCC
PDAEIARVLKNLGFDVQTGPQEFAVTVPGHRLRDIEREIDLIEEVARVVGYDRFAPTLPP
CCHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PADGGYLPFEDFIERRVRSLCQGAGLTEVVTYSLAPDRDQQPVVLSNPLSAELNSLRTNL
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCEEECCCCHHHHHHHHHHH
IDGLLEILRFNRSQGNMPFHAFEVGVVFLRSDEGIFESGRLGAVMCGEPAVGDWQKLTPP
HHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHCCCC
FDWFAAKGVLAAILQPWQIEVEYQADRRDERLHPGRTASLWVSGERLGTLGQLHPRLASR
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHHCCHHHHHHHHHHH
LDLPEQTFVFEIDLDFLIDLVRERPVEFRSFSPFPPAARDLSFYAREALTVFEFERLIRE
CCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QGEPLLESVALLDEFKGQGVPEGCRSLAFRMVYRSDHTLTEEEITAVHQRVRQALAERYS
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
VDLRS
CCCCC
>Mature Secondary Structure
MRVSFNWLQEYVEFDFTPSELAEKLTMAGFEVEHVEDRRTWAAGVVVGRVLECAPHPQAD
CCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RLHVCRVDIGTGRLLNIVCGAPNARAGIYAPVAPVGTYLPIKDLKLRAASIRGMPSEGML
CEEEEEEECCCCCEEEEEECCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCE
CSLEELGLEKASEGIHIFPEASLPLGLDVGPLLGLDDAILEVASTANRADALSMVGIARE
EEHHHHCHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
VAALTGGILRLPLVDAPLVPRGDLAARIAEPEACPVYTATLLEEVAVGPAPDWLRERLEK
HHHHHCCEEEECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
AGMRPINNVVDVTNYVLLEWGQPLHAFDADRLAAGTLGVRFAHKGEQLVTLDGTERPLTP
CCCCCHHHHHHHHHHEEEECCCCHHHCCCHHHHHHHHCEEEECCCCEEEEECCCCCCCCC
ANLLITAGERPVALAGVMGGEATEVGGQTRRIVLEAAIFDPPAIRRSARVFALRTEASAR
CCEEEECCCCCEEEEEECCCCCHHCCCCCEEEEEEEECCCCHHHHCCCEEEEEECCHHHH
YERGVDASALEHALGRALQLLADCAGARAVVQATDDYRRRENRVVSLRPERLAQILGEDI
HHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCEEEECHHHHHHHHCCCC
PDAEIARVLKNLGFDVQTGPQEFAVTVPGHRLRDIEREIDLIEEVARVVGYDRFAPTLPP
CCHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PADGGYLPFEDFIERRVRSLCQGAGLTEVVTYSLAPDRDQQPVVLSNPLSAELNSLRTNL
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCEEECCCCHHHHHHHHHHH
IDGLLEILRFNRSQGNMPFHAFEVGVVFLRSDEGIFESGRLGAVMCGEPAVGDWQKLTPP
HHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHCCCC
FDWFAAKGVLAAILQPWQIEVEYQADRRDERLHPGRTASLWVSGERLGTLGQLHPRLASR
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHHCCHHHHHHHHHHH
LDLPEQTFVFEIDLDFLIDLVRERPVEFRSFSPFPPAARDLSFYAREALTVFEFERLIRE
CCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QGEPLLESVALLDEFKGQGVPEGCRSLAFRMVYRSDHTLTEEEITAVHQRVRQALAERYS
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
VDLRS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 14621292