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The map label for this gene is ylbH [H]

Identifier: 37522499

GI number: 37522499

Start: 3127210

End: 3127782

Strand: Reverse

Name: ylbH [H]

Synonym: gll2930

Alternate gene names: 37522499

Gene position: 3127782-3127210 (Counterclockwise)

Preceding gene: 37522500

Following gene: 37522495

Centisome position: 67.13

GC content: 68.41

Gene sequence:

>573_bases
ATGAGCCTGCGTATCTACGGCAACCGCTTGCTGCGCACCCCGGGCGGACTCGATACCCGGCCTACTTTAGGGCGGGTGCG
CACGGCCGTCTTCGGTCGCTGGCACGGCCGGGTGGAAGGCTGCCATTGGCTCGATCTGTGCGCCGGGGCGGGCACGATGG
GGGCCGAAGCCCTGGCGCGCGGCGCGGCAGAGGCAATCGGGATCGAGCAGGCGGCCGGGGCGGCGCGCATCGCCGCGGCC
AACTGGGACAAGATCGCCCCCGGCCTCGGGACGATCCACAAAACGGACGCGCTTACCGGTGTCGCCCGTCTGGCAAAGCA
GGGCCGGGTGTTCGATCTCATCTACTTCGACCCGCCTTACCGTGGGGAGCTTTACCTGCCGGTACTGGAGGCGGTCGTTG
CCTGCGGGTTGCTGGCCGACGACGGCGAACTGGCTGCCGAGCACGGCGAAGATTTGCCGGATTTGCCCGAGGCCGTGGGT
TCTCTGGTGCGACTCGATCGGCGGGTCTACGGCGGTACGGTGGTAAGCTACTACGGTTTTTTGGGCGCGGCGGCGAGCAA
CTCCTGCGGGTGA

Upstream 100 bases:

>100_bases
TTACTACGGGTCAATCGTCCTCCCTCATGAAGCATCGTGGCAGCCAGCGGGTGATGGGTAGACTTGCTTGAACCTCACGG
CCGGTTAGCATAGGCGGACG

Downstream 100 bases:

>100_bases
CTCGGGGGGAGGTTGCCGTAGGAAATCAGCTCCTGGCAGATTTCGCGCACGATGGGAGCGGCGGTGGTGGAGCCGAAGGC
GTTACCGGACTTGGGTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSLRIYGNRLLRTPGGLDTRPTLGRVRTAVFGRWHGRVEGCHWLDLCAGAGTMGAEALARGAAEAIGIEQAAGAARIAAA
NWDKIAPGLGTIHKTDALTGVARLAKQGRVFDLIYFDPPYRGELYLPVLEAVVACGLLADDGELAAEHGEDLPDLPEAVG
SLVRLDRRVYGGTVVSYYGFLGAAASNSCG

Sequences:

>Translated_190_residues
MSLRIYGNRLLRTPGGLDTRPTLGRVRTAVFGRWHGRVEGCHWLDLCAGAGTMGAEALARGAAEAIGIEQAAGAARIAAA
NWDKIAPGLGTIHKTDALTGVARLAKQGRVFDLIYFDPPYRGELYLPVLEAVVACGLLADDGELAAEHGEDLPDLPEAVG
SLVRLDRRVYGGTVVSYYGFLGAAASNSCG
>Mature_189_residues
SLRIYGNRLLRTPGGLDTRPTLGRVRTAVFGRWHGRVEGCHWLDLCAGAGTMGAEALARGAAEAIGIEQAAGAARIAAAN
WDKIAPGLGTIHKTDALTGVARLAKQGRVFDLIYFDPPYRGELYLPVLEAVVACGLLADDGELAAEHGEDLPDLPEAVGS
LVRLDRRVYGGTVVSYYGFLGAAASNSCG

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 19978; Mature: 19847

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRIYGNRLLRTPGGLDTRPTLGRVRTAVFGRWHGRVEGCHWLDLCAGAGTMGAEALAR
CEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHH
GAAEAIGIEQAAGAARIAAANWDKIAPGLGTIHKTDALTGVARLAKQGRVFDLIYFDPPY
HHHHHHCHHHHCCCHHEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC
RGELYLPVLEAVVACGLLADDGELAAEHGEDLPDLPEAVGSLVRLDRRVYGGTVVSYYGF
CCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
LGAAASNSCG
HHCCCCCCCC
>Mature Secondary Structure 
SLRIYGNRLLRTPGGLDTRPTLGRVRTAVFGRWHGRVEGCHWLDLCAGAGTMGAEALAR
EEEEECCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHH
GAAEAIGIEQAAGAARIAAANWDKIAPGLGTIHKTDALTGVARLAKQGRVFDLIYFDPPY
HHHHHHCHHHHCCCHHEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC
RGELYLPVLEAVVACGLLADDGELAAEHGEDLPDLPEAVGSLVRLDRRVYGGTVVSYYGF
CCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
LGAAASNSCG
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]