| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37522386
Identifier: 37522386
GI number: 37522386
Start: 2996055
End: 2996612
Strand: Direct
Name: 37522386
Synonym: glr2817
Alternate gene names: NA
Gene position: 2996055-2996612 (Clockwise)
Preceding gene: 37522385
Following gene: 37522389
Centisome position: 64.31
GC content: 56.81
Gene sequence:
>558_bases TTGTACTACGACGCGGGACAATTCGGATTCGTTGCGCAACTGGAGACCCACTGGCAGGCTATCCGCCAGGAACTTGAACA TTTAGGTGACGGCGACTTTATCGCCTGGCCCGAAAAATATTTGTATGGTCAGGGCTGGGACATTTTTGGCCTCTATGCCT TCGGGATCAAAGTCGGCGCCAACTGCAAACTTTGTCCCGAGACGACCCGGCTGGTCAATCAGATCCCCGGTCTGATGAGC GCCGGTTTTTCTTCGCTCAAGCCGGGCACCCATATCGCCCCGCACACCGGTTATCCGGACGGTCTGTTGCGGTGTCATCT GGGACTGATCGTCCCGGACGAGAGCGCGCTGCGGGTGGGGGAGGCGGTGCGAAGCTGGCAGGAAGGCCGCTGTCTGGTTT TTGACGACACCACCGAGCACGAAGCCTGGAATCGGGGAAGCTTTACCCGTATTGTGCTGCTGCTGGATTTCAAGGCTCCG GCAGGTTTGCTCTTTGCGCCGGTAAAACCCGAAAGCAAGGGTCTAGCTTCGTTGTTCGGGTTGCTGAAAAAAAAATAG
Upstream 100 bases:
>100_bases CTGGGGATGGATCGCCAACAGGTAGCTCTGATCTGAAGCACTTGCAAGGCTGTGTTGTCTGAGTTAGCGTGCCTGACATA GTTCGGCTGGAACCACAAAG
Downstream 100 bases:
>100_bases GTGCCGACAAGAACGCCTCCGGCAAAGCCGCAATCAGATGTTGAGTGCACACTGCACCTGGTCTATCTGTTGCGACGTCG TCTCCAACTTATCCATGTCG
Product: hydroxylase
Products: NA
Alternate protein names: Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Peptide-Aspartate Beta-Dioxygenase; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Aspartyl-Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Lipid A-Myristate Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Peptide Aspartate B-Dioxygenase; Aspartyl/Asparaginyl-Beta-Hydroxylase; Hydroxylase; Peptide-Aspartate B-Dioxygenase; Aspartate Beta-Hydroxylase; Lipopolysaccharide Biosynthetic Protein; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family Protein
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MYYDAGQFGFVAQLETHWQAIRQELEHLGDGDFIAWPEKYLYGQGWDIFGLYAFGIKVGANCKLCPETTRLVNQIPGLMS AGFSSLKPGTHIAPHTGYPDGLLRCHLGLIVPDESALRVGEAVRSWQEGRCLVFDDTTEHEAWNRGSFTRIVLLLDFKAP AGLLFAPVKPESKGLASLFGLLKKK
Sequences:
>Translated_185_residues MYYDAGQFGFVAQLETHWQAIRQELEHLGDGDFIAWPEKYLYGQGWDIFGLYAFGIKVGANCKLCPETTRLVNQIPGLMS AGFSSLKPGTHIAPHTGYPDGLLRCHLGLIVPDESALRVGEAVRSWQEGRCLVFDDTTEHEAWNRGSFTRIVLLLDFKAP AGLLFAPVKPESKGLASLFGLLKKK >Mature_185_residues MYYDAGQFGFVAQLETHWQAIRQELEHLGDGDFIAWPEKYLYGQGWDIFGLYAFGIKVGANCKLCPETTRLVNQIPGLMS AGFSSLKPGTHIAPHTGYPDGLLRCHLGLIVPDESALRVGEAVRSWQEGRCLVFDDTTEHEAWNRGSFTRIVLLLDFKAP AGLLFAPVKPESKGLASLFGLLKKK
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI258613943, Length=166, Percent_Identity=32.5301204819277, Blast_Score=96, Evalue=1e-20, Organism=Homo sapiens, GI14589866, Length=166, Percent_Identity=32.5301204819277, Blast_Score=96, Evalue=1e-20, Organism=Homo sapiens, GI194328779, Length=164, Percent_Identity=34.7560975609756, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI38708313, Length=119, Percent_Identity=35.2941176470588, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193210573, Length=159, Percent_Identity=27.6729559748428, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17568771, Length=159, Percent_Identity=27.6729559748428, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193210571, Length=159, Percent_Identity=27.6729559748428, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24654024, Length=173, Percent_Identity=38.150289017341, Blast_Score=106, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20526; Mature: 20526
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYDAGQFGFVAQLETHWQAIRQELEHLGDGDFIAWPEKYLYGQGWDIFGLYAFGIKVGA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHCCCCCCCEEEEEEEEEECC NCKLCPETTRLVNQIPGLMSAGFSSLKPGTHIAPHTGYPDGLLRCHLGLIVPDESALRVG CCEECHHHHHHHHHCCHHHHCCHHHCCCCCCCCCCCCCCCHHHHEEECEEECCHHHHHHH EAVRSWQEGRCLVFDDTTEHEAWNRGSFTRIVLLLDFKAPAGLLFAPVKPESKGLASLFG HHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCHHHHHHH LLKKK HHHCC >Mature Secondary Structure MYYDAGQFGFVAQLETHWQAIRQELEHLGDGDFIAWPEKYLYGQGWDIFGLYAFGIKVGA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHCCCCCCCEEEEEEEEEECC NCKLCPETTRLVNQIPGLMSAGFSSLKPGTHIAPHTGYPDGLLRCHLGLIVPDESALRVG CCEECHHHHHHHHHCCHHHHCCHHHCCCCCCCCCCCCCCCHHHHEEECEEECCHHHHHHH EAVRSWQEGRCLVFDDTTEHEAWNRGSFTRIVLLLDFKAPAGLLFAPVKPESKGLASLFG HHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCHHHHHHH LLKKK HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA