Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

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The map label for this gene is ywaD [H]

Identifier: 37522227

GI number: 37522227

Start: 2818205

End: 2819539

Strand: Direct

Name: ywaD [H]

Synonym: glr2658

Alternate gene names: 37522227

Gene position: 2818205-2819539 (Clockwise)

Preceding gene: 37522225

Following gene: 37522228

Centisome position: 60.49

GC content: 64.94

Gene sequence:

>1335_bases
ATGCGCGCCCTGGTCATAAACTGGATGCTCCCAAGCAAAACGGTGGATAACAGCTTACCCCAGCCGTCAGGAACGCGCGA
GCCGACGGCGCGTCTGGAAAGCATATCCTTGCGATGGCTCTCTATGGTGCAACCCTGGCGGGCCGGTGGCGCTGTGCTGC
TGGCGATCAGTTTGCTGGTTTTTGCCCAACCGGTTTATCCCCTCGCCGAGCGGCTCGGGGCCGATGTGCAGGCGTTGCTC
GCCGGGGGGCCGCGGGTGGCCGGATCGGCCGCCGCCGAGCGGGCGAGCGCTTATCTAGGTGAGCAGTACCGGGCGGCGGG
CTATGAAGTCGAAATCCAGCCCTTTTCCTTCGAGAAATTCAACGATCTCGGTTCGTCGCTGCTCGTTGAAGACGAGCGGC
TAAAGGGACGCGCCCTGTCCGGATCGATAGCCGGGAATGCTGCTACCGCTGCAGTGGTGGTGCCGGGCGTAGGAGAATCT
GCCGATTTCGCCCGCGTCGATGTCAAGGGAGCCGTCGCCATCGTCCGCCGCGGCAAAATCCCGTTTCTCGAAAAAGCGCG
CCAGGCGGCTCAGGCCGGGGCGGTGGGCCTGGTGGTCGTCAATTCCCAGGATGGCCCCCTGATGGGCACCCTGGGAGGCA
AAGCCGCTATCCCGGTCCTCGGTCTTTCGGGTAAACAAGGGAGCGCGTTGCTCGCGGGCAAATTTCCTAAACCCGTGCAA
CTGGAGGTGCGCACCGAAGTCGTCTCGCTCACCGGCCGCAATGTGATCGCCCGCCTTGCCGGGGTGAGCACGCCGCAGGT
CTTGCTCGGAGCCCATTACGATTCGGTCGAAGGTGCGCCCGGAGCCAACGACAACGCCAGCGGCTCCGCCGTACTGCTGG
AAAGCGCCCGGCGGCTGGCCGGTACGCCCCTGGCCCGTCGTGCCTGGTTCGTGCACTTCGACGCCGAAGAAGAGGGACTA
GTGGGCTCCCGCCACTTCGTGCGCTCCGCTTCGGCGCCCTTGATCAAAGCACTGCGCGGCATGCTCAACTTCGACATGGT
GGGCGTGAACGAAAAGCTCTTGGTGGGCGGCACCCCCGAACTGGTCGCCCTTGTCGAAAAATCGGTGAGCGCCGTGCAGA
AGGTGCGCCCGAGCAACGCCAGCGATCACGCCTCCTTTGCCGCGGCCAAGGTACCGGTACTCTTTTTCCACCGGGGCCAG
GATCCCAACTACCACCAGCCCGGAGACAAGCAGGTGGATCCGCGGCTATTGGAGGCGACCGTCGAAGCCGCCCTTGGCAC
CGTGGGCGCGCTGCTGCCCCCGGCTCTTTCCGAAAGCCCGGAGCGTTCGCTATGA

Upstream 100 bases:

>100_bases
TTTGAGATTCAGGGCGTGGGCATGGCCCTGGGATCCGTAGCCGACGATGGCGATCGTCTTGTTGTCGAGTACCGACAGAT
CGGCGTCCTCGTCGTAGTAC

Downstream 100 bases:

>100_bases
TGAATAGCCGGATAAAACCGTCCAGGGCGGCATAGCCAAGCGGTAAGGCAAGGGTCTGCAAAACCCTGATCCCCCAGTTC
GAATCTGGGTGCCGCCTCTC

Product: aminopeptidase

Products: NA

Alternate protein names: Arginyl aminopeptidase; BSAP; Leucyl aminopeptidase [H]

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MRALVINWMLPSKTVDNSLPQPSGTREPTARLESISLRWLSMVQPWRAGGAVLLAISLLVFAQPVYPLAERLGADVQALL
AGGPRVAGSAAAERASAYLGEQYRAAGYEVEIQPFSFEKFNDLGSSLLVEDERLKGRALSGSIAGNAATAAVVVPGVGES
ADFARVDVKGAVAIVRRGKIPFLEKARQAAQAGAVGLVVVNSQDGPLMGTLGGKAAIPVLGLSGKQGSALLAGKFPKPVQ
LEVRTEVVSLTGRNVIARLAGVSTPQVLLGAHYDSVEGAPGANDNASGSAVLLESARRLAGTPLARRAWFVHFDAEEEGL
VGSRHFVRSASAPLIKALRGMLNFDMVGVNEKLLVGGTPELVALVEKSVSAVQKVRPSNASDHASFAAAKVPVLFFHRGQ
DPNYHQPGDKQVDPRLLEATVEAALGTVGALLPPALSESPERSL

Sequences:

>Translated_444_residues
MRALVINWMLPSKTVDNSLPQPSGTREPTARLESISLRWLSMVQPWRAGGAVLLAISLLVFAQPVYPLAERLGADVQALL
AGGPRVAGSAAAERASAYLGEQYRAAGYEVEIQPFSFEKFNDLGSSLLVEDERLKGRALSGSIAGNAATAAVVVPGVGES
ADFARVDVKGAVAIVRRGKIPFLEKARQAAQAGAVGLVVVNSQDGPLMGTLGGKAAIPVLGLSGKQGSALLAGKFPKPVQ
LEVRTEVVSLTGRNVIARLAGVSTPQVLLGAHYDSVEGAPGANDNASGSAVLLESARRLAGTPLARRAWFVHFDAEEEGL
VGSRHFVRSASAPLIKALRGMLNFDMVGVNEKLLVGGTPELVALVEKSVSAVQKVRPSNASDHASFAAAKVPVLFFHRGQ
DPNYHQPGDKQVDPRLLEATVEAALGTVGALLPPALSESPERSL
>Mature_444_residues
MRALVINWMLPSKTVDNSLPQPSGTREPTARLESISLRWLSMVQPWRAGGAVLLAISLLVFAQPVYPLAERLGADVQALL
AGGPRVAGSAAAERASAYLGEQYRAAGYEVEIQPFSFEKFNDLGSSLLVEDERLKGRALSGSIAGNAATAAVVVPGVGES
ADFARVDVKGAVAIVRRGKIPFLEKARQAAQAGAVGLVVVNSQDGPLMGTLGGKAAIPVLGLSGKQGSALLAGKFPKPVQ
LEVRTEVVSLTGRNVIARLAGVSTPQVLLGAHYDSVEGAPGANDNASGSAVLLESARRLAGTPLARRAWFVHFDAEEEGL
VGSRHFVRSASAPLIKALRGMLNFDMVGVNEKLLVGGTPELVALVEKSVSAVQKVRPSNASDHASFAAAKVPVLFFHRGQ
DPNYHQPGDKQVDPRLLEATVEAALGTVGALLPPALSESPERSL

Specific function: Catalyzes the hydrolysis of a range of N-terminal amino acids [H]

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M28 family. M28B subfamily [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319763, Length=211, Percent_Identity=31.2796208530806, Blast_Score=91, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007484
- InterPro:   IPR003137 [H]

Pfam domain/function: PF02225 PA; PF04389 Peptidase_M28 [H]

EC number: =3.4.11.6; =3.4.11.10 [H]

Molecular weight: Translated: 46423; Mature: 46423

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALVINWMLPSKTVDNSLPQPSGTREPTARLESISLRWLSMVQPWRAGGAVLLAISLLV
CCEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
FAQPVYPLAERLGADVQALLAGGPRVAGSAAAERASAYLGEQYRAAGYEVEIQPFSFEKF
HHCCHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHH
NDLGSSLLVEDERLKGRALSGSIAGNAATAAVVVPGVGESADFARVDVKGAVAIVRRGKI
HHCCCCEEEECHHHCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCC
PFLEKARQAAQAGAVGLVVVNSQDGPLMGTLGGKAAIPVLGLSGKQGSALLAGKFPKPVQ
CHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCEEEECCCCCCCEEEECCCCCCEE
LEVRTEVVSLTGRNVIARLAGVSTPQVLLGAHYDSVEGAPGANDNASGSAVLLESARRLA
EEEEEEEEHHCCHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
GTPLARRAWFVHFDAEEEGLVGSRHFVRSASAPLIKALRGMLNFDMVGVNEKLLVGGTPE
CCCHHHEEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEECCCCEEEECCCHH
LVALVEKSVSAVQKVRPSNASDHASFAAAKVPVLFFHRGQDPNYHQPGDKQVDPRLLEAT
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH
VEAALGTVGALLPPALSESPERSL
HHHHHHHHHHHCCCHHCCCCCCCC
>Mature Secondary Structure
MRALVINWMLPSKTVDNSLPQPSGTREPTARLESISLRWLSMVQPWRAGGAVLLAISLLV
CCEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
FAQPVYPLAERLGADVQALLAGGPRVAGSAAAERASAYLGEQYRAAGYEVEIQPFSFEKF
HHCCHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHH
NDLGSSLLVEDERLKGRALSGSIAGNAATAAVVVPGVGESADFARVDVKGAVAIVRRGKI
HHCCCCEEEECHHHCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCC
PFLEKARQAAQAGAVGLVVVNSQDGPLMGTLGGKAAIPVLGLSGKQGSALLAGKFPKPVQ
CHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCEEEECCCCCCCEEEECCCCCCEE
LEVRTEVVSLTGRNVIARLAGVSTPQVLLGAHYDSVEGAPGANDNASGSAVLLESARRLA
EEEEEEEEHHCCHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
GTPLARRAWFVHFDAEEEGLVGSRHFVRSASAPLIKALRGMLNFDMVGVNEKLLVGGTPE
CCCHHHEEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEECCCCEEEECCCHH
LVALVEKSVSAVQKVRPSNASDHASFAAAKVPVLFFHRGQDPNYHQPGDKQVDPRLLEAT
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH
VEAALGTVGALLPPALSESPERSL
HHHHHHHHHHHCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377; 1806041 [H]