| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is ywaD [H]
Identifier: 37522227
GI number: 37522227
Start: 2818205
End: 2819539
Strand: Direct
Name: ywaD [H]
Synonym: glr2658
Alternate gene names: 37522227
Gene position: 2818205-2819539 (Clockwise)
Preceding gene: 37522225
Following gene: 37522228
Centisome position: 60.49
GC content: 64.94
Gene sequence:
>1335_bases ATGCGCGCCCTGGTCATAAACTGGATGCTCCCAAGCAAAACGGTGGATAACAGCTTACCCCAGCCGTCAGGAACGCGCGA GCCGACGGCGCGTCTGGAAAGCATATCCTTGCGATGGCTCTCTATGGTGCAACCCTGGCGGGCCGGTGGCGCTGTGCTGC TGGCGATCAGTTTGCTGGTTTTTGCCCAACCGGTTTATCCCCTCGCCGAGCGGCTCGGGGCCGATGTGCAGGCGTTGCTC GCCGGGGGGCCGCGGGTGGCCGGATCGGCCGCCGCCGAGCGGGCGAGCGCTTATCTAGGTGAGCAGTACCGGGCGGCGGG CTATGAAGTCGAAATCCAGCCCTTTTCCTTCGAGAAATTCAACGATCTCGGTTCGTCGCTGCTCGTTGAAGACGAGCGGC TAAAGGGACGCGCCCTGTCCGGATCGATAGCCGGGAATGCTGCTACCGCTGCAGTGGTGGTGCCGGGCGTAGGAGAATCT GCCGATTTCGCCCGCGTCGATGTCAAGGGAGCCGTCGCCATCGTCCGCCGCGGCAAAATCCCGTTTCTCGAAAAAGCGCG CCAGGCGGCTCAGGCCGGGGCGGTGGGCCTGGTGGTCGTCAATTCCCAGGATGGCCCCCTGATGGGCACCCTGGGAGGCA AAGCCGCTATCCCGGTCCTCGGTCTTTCGGGTAAACAAGGGAGCGCGTTGCTCGCGGGCAAATTTCCTAAACCCGTGCAA CTGGAGGTGCGCACCGAAGTCGTCTCGCTCACCGGCCGCAATGTGATCGCCCGCCTTGCCGGGGTGAGCACGCCGCAGGT CTTGCTCGGAGCCCATTACGATTCGGTCGAAGGTGCGCCCGGAGCCAACGACAACGCCAGCGGCTCCGCCGTACTGCTGG AAAGCGCCCGGCGGCTGGCCGGTACGCCCCTGGCCCGTCGTGCCTGGTTCGTGCACTTCGACGCCGAAGAAGAGGGACTA GTGGGCTCCCGCCACTTCGTGCGCTCCGCTTCGGCGCCCTTGATCAAAGCACTGCGCGGCATGCTCAACTTCGACATGGT GGGCGTGAACGAAAAGCTCTTGGTGGGCGGCACCCCCGAACTGGTCGCCCTTGTCGAAAAATCGGTGAGCGCCGTGCAGA AGGTGCGCCCGAGCAACGCCAGCGATCACGCCTCCTTTGCCGCGGCCAAGGTACCGGTACTCTTTTTCCACCGGGGCCAG GATCCCAACTACCACCAGCCCGGAGACAAGCAGGTGGATCCGCGGCTATTGGAGGCGACCGTCGAAGCCGCCCTTGGCAC CGTGGGCGCGCTGCTGCCCCCGGCTCTTTCCGAAAGCCCGGAGCGTTCGCTATGA
Upstream 100 bases:
>100_bases TTTGAGATTCAGGGCGTGGGCATGGCCCTGGGATCCGTAGCCGACGATGGCGATCGTCTTGTTGTCGAGTACCGACAGAT CGGCGTCCTCGTCGTAGTAC
Downstream 100 bases:
>100_bases TGAATAGCCGGATAAAACCGTCCAGGGCGGCATAGCCAAGCGGTAAGGCAAGGGTCTGCAAAACCCTGATCCCCCAGTTC GAATCTGGGTGCCGCCTCTC
Product: aminopeptidase
Products: NA
Alternate protein names: Arginyl aminopeptidase; BSAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MRALVINWMLPSKTVDNSLPQPSGTREPTARLESISLRWLSMVQPWRAGGAVLLAISLLVFAQPVYPLAERLGADVQALL AGGPRVAGSAAAERASAYLGEQYRAAGYEVEIQPFSFEKFNDLGSSLLVEDERLKGRALSGSIAGNAATAAVVVPGVGES ADFARVDVKGAVAIVRRGKIPFLEKARQAAQAGAVGLVVVNSQDGPLMGTLGGKAAIPVLGLSGKQGSALLAGKFPKPVQ LEVRTEVVSLTGRNVIARLAGVSTPQVLLGAHYDSVEGAPGANDNASGSAVLLESARRLAGTPLARRAWFVHFDAEEEGL VGSRHFVRSASAPLIKALRGMLNFDMVGVNEKLLVGGTPELVALVEKSVSAVQKVRPSNASDHASFAAAKVPVLFFHRGQ DPNYHQPGDKQVDPRLLEATVEAALGTVGALLPPALSESPERSL
Sequences:
>Translated_444_residues MRALVINWMLPSKTVDNSLPQPSGTREPTARLESISLRWLSMVQPWRAGGAVLLAISLLVFAQPVYPLAERLGADVQALL AGGPRVAGSAAAERASAYLGEQYRAAGYEVEIQPFSFEKFNDLGSSLLVEDERLKGRALSGSIAGNAATAAVVVPGVGES ADFARVDVKGAVAIVRRGKIPFLEKARQAAQAGAVGLVVVNSQDGPLMGTLGGKAAIPVLGLSGKQGSALLAGKFPKPVQ LEVRTEVVSLTGRNVIARLAGVSTPQVLLGAHYDSVEGAPGANDNASGSAVLLESARRLAGTPLARRAWFVHFDAEEEGL VGSRHFVRSASAPLIKALRGMLNFDMVGVNEKLLVGGTPELVALVEKSVSAVQKVRPSNASDHASFAAAKVPVLFFHRGQ DPNYHQPGDKQVDPRLLEATVEAALGTVGALLPPALSESPERSL >Mature_444_residues MRALVINWMLPSKTVDNSLPQPSGTREPTARLESISLRWLSMVQPWRAGGAVLLAISLLVFAQPVYPLAERLGADVQALL AGGPRVAGSAAAERASAYLGEQYRAAGYEVEIQPFSFEKFNDLGSSLLVEDERLKGRALSGSIAGNAATAAVVVPGVGES ADFARVDVKGAVAIVRRGKIPFLEKARQAAQAGAVGLVVVNSQDGPLMGTLGGKAAIPVLGLSGKQGSALLAGKFPKPVQ LEVRTEVVSLTGRNVIARLAGVSTPQVLLGAHYDSVEGAPGANDNASGSAVLLESARRLAGTPLARRAWFVHFDAEEEGL VGSRHFVRSASAPLIKALRGMLNFDMVGVNEKLLVGGTPELVALVEKSVSAVQKVRPSNASDHASFAAAKVPVLFFHRGQ DPNYHQPGDKQVDPRLLEATVEAALGTVGALLPPALSESPERSL
Specific function: Catalyzes the hydrolysis of a range of N-terminal amino acids [H]
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M28 family. M28B subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319763, Length=211, Percent_Identity=31.2796208530806, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007484 - InterPro: IPR003137 [H]
Pfam domain/function: PF02225 PA; PF04389 Peptidase_M28 [H]
EC number: =3.4.11.6; =3.4.11.10 [H]
Molecular weight: Translated: 46423; Mature: 46423
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALVINWMLPSKTVDNSLPQPSGTREPTARLESISLRWLSMVQPWRAGGAVLLAISLLV CCEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH FAQPVYPLAERLGADVQALLAGGPRVAGSAAAERASAYLGEQYRAAGYEVEIQPFSFEKF HHCCHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHH NDLGSSLLVEDERLKGRALSGSIAGNAATAAVVVPGVGESADFARVDVKGAVAIVRRGKI HHCCCCEEEECHHHCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCC PFLEKARQAAQAGAVGLVVVNSQDGPLMGTLGGKAAIPVLGLSGKQGSALLAGKFPKPVQ CHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCEEEECCCCCCCEEEECCCCCCEE LEVRTEVVSLTGRNVIARLAGVSTPQVLLGAHYDSVEGAPGANDNASGSAVLLESARRLA EEEEEEEEHHCCHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH GTPLARRAWFVHFDAEEEGLVGSRHFVRSASAPLIKALRGMLNFDMVGVNEKLLVGGTPE CCCHHHEEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEECCCCEEEECCCHH LVALVEKSVSAVQKVRPSNASDHASFAAAKVPVLFFHRGQDPNYHQPGDKQVDPRLLEAT HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH VEAALGTVGALLPPALSESPERSL HHHHHHHHHHHCCCHHCCCCCCCC >Mature Secondary Structure MRALVINWMLPSKTVDNSLPQPSGTREPTARLESISLRWLSMVQPWRAGGAVLLAISLLV CCEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH FAQPVYPLAERLGADVQALLAGGPRVAGSAAAERASAYLGEQYRAAGYEVEIQPFSFEKF HHCCHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHH NDLGSSLLVEDERLKGRALSGSIAGNAATAAVVVPGVGESADFARVDVKGAVAIVRRGKI HHCCCCEEEECHHHCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCC PFLEKARQAAQAGAVGLVVVNSQDGPLMGTLGGKAAIPVLGLSGKQGSALLAGKFPKPVQ CHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCEEEECCCCCCCEEEECCCCCCEE LEVRTEVVSLTGRNVIARLAGVSTPQVLLGAHYDSVEGAPGANDNASGSAVLLESARRLA EEEEEEEEHHCCHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH GTPLARRAWFVHFDAEEEGLVGSRHFVRSASAPLIKALRGMLNFDMVGVNEKLLVGGTPE CCCHHHEEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEECCCCEEEECCCHH LVALVEKSVSAVQKVRPSNASDHASFAAAKVPVLFFHRGQDPNYHQPGDKQVDPRLLEAT HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH VEAALGTVGALLPPALSESPERSL HHHHHHHHHHHCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 1806041 [H]