| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37522228
Identifier: 37522228
GI number: 37522228
Start: 2820214
End: 2822937
Strand: Direct
Name: 37522228
Synonym: glr2659
Alternate gene names: NA
Gene position: 2820214-2822937 (Clockwise)
Preceding gene: 37522227
Following gene: 37522229
Centisome position: 60.53
GC content: 47.28
Gene sequence:
>2724_bases ATGCCCGACGGAATCACCGAAGAATACTTTGCCCTGCAGCATTTCACAAATCGGCACTCGCTCACTCGGCGTTTTGCCAC ACGGCTTCACAGCAATCCTACTCCCCAGACTGTGCTTTGTCTCCACGGTGATGGGGGCAACGGCAAGTCTTTGCTATTGC GCTACTGGTATGAGAGTGCTTGCAAGCTCTTTCAGGACTGGGAACAAGCTAACGCCAACGACGACGATCGCGACTTCGTA AACAGACTCACGGCTTTACCCAACTCTCACTACCTACCGATCCTCTCAGTATTTCACGACTTTGGCCAACCTGGTTGCAA CGAAGAACAGCCCCAGCACGACCTTTATGGAACCCTCATGATCCACAACGCCCTTGTGCAAGCTGCGATCACTAGGGGCT TAAAGCACTGCTTCGTATTTCCGCGTTTTTCCTTTGCAATCGCATGGTCCTTACATCGAACGGGGAAATCAAAACAAGAA ATCCGTCCTCTTTTTCCGACAGACGCAGTTTTTGACTTTGTAGCAGCTATCGTTGACAGCGCAATCGGAATTCCGATTGC CACTGCTGGAAATGCCGTTCGAAGAATCATTGCAAATTACACATTGCCTACCGATGAACAACAGTTGCGTGTGCAGTTCG AGGGCCAACTAGACGAACACTGGATGCGTGAGCTCTGCCAGAGGAATCCACGTCGCGATTTATTACCGAAACTGCCGGAA CTCCTCGCCAAGGATATCAATGATGCGATGGCTCGGTTCCCCAAAGCCAGGATCGTCCTGCTTTTTGATGCTCACCAAGC TTTCTGGGGCACTGAACAAGACGCTGCACCAGGAAGCTATCACCAACGCGACGAGTGGTTCCGCCGTTTCCTTCTCTCTT TGGATCTCGCTGGCGGCATTGTGGTAGTCGTTGCAAGCCGGGAGCCTCCTCGATGGTCCGAAGCGAGTCGGCATCCGATT TCTCGCAAACATCTAGAATCTGAGCTTGTCGGCCACCTGACAGAAGCAGACGGTCGCGAGTACTTGCAAAAGTTAAACAT ATCGACACCGACACTGCAATCGAGCATGCTTCGTTACGCCAGTGTGAGAGATGGCGAGATCCACCCCCTTTACCTCGCGC TCTGTGCGGACTTAGTATTAGCAGCGCGAAACCAAGAAGAGGAGATCCAAGCAGACACGTTTGCACAAAGTGCTTCGCAA ACCAATAAGCCTCGCGAACTGCTTGAAAGACTAACCCACTATGCGAACGAGAAGCTGCTGGATATCCTAGAAGCCTTGAG TGCTTGTCGATCGTTTGATCTCAGTGTCTTCCGTGTACTCGGGCAGAGCCTAAATTTTGACACCGACGACGCTACTTTTC GAGTGCTTTGCAGATATTCATTCGTGTGGCCGACCCAAAACCGTAATGGTTCGTATCGTATTCATGATCTTATGAGGCGG CTCAATACCCAATTTGATACGGAGTTGACTCGTCGTGCGCACGAACTCTTGATCGATTATTACCAAAGAGAAGGGAATCT TGCTGAGTCCATATACCACTGCTATTGCTTGGATCAAAAGCAAGGGATAGCCAGTTGGTGGCCGGAATTTCTAAGGGCAG AAAGATTCGGAAACTATGAGCTGTGTCGCAACCTGCTGGACGTCTTGGTTTTGATGGATATATCAGGGTTAGACAAAGTC ACTGTTCTATTGAGTGTTGGACTGTATTTTGCAAACCTTGGCCAACTTGACGAAGCCAGGAGCAGGTTTACTGAAGCCAT CGATGTTTCCGACGAACTTCTTGCATTGGAGCCTCAGAATGTGTCTTTTGTCGTAAACAAATCTTCTGCATTGATGGACC TTGCCGATATCCAAGCGAGGACGGTTGGTGTTGACGAGGCAATTCAAGTTTTACGTCAAGCCATAGCTGTCGTCGAAAAT GCATTAGAATCTGGGTTAGGAAATACAACGGACGATGATAAATACCTAACAGTCAATAAGCTTAGAGGATTGTTCGACTT GGCTGTTTTGCTCAAGTACGTCAGCATTCTCGAAGCCAAGGAAAGGCTCAATGAAGCGTTGTTATTGTGCAGAGAAACGT TACTCATATTCCCTGATTTCACCAGTGTACTTTTTCGAAGCGGTCTCATTCTAGATCATCTCGCCCGAATGGCCGAACAC GAGCCTCAATTATCCAACCCAGAAGATATATACAATGAATCCATCTCTACGTATGACAGGCTGTTAGAGCTTCAGCCCGA GAATTTCAACGGCTACAAAAATAGAGCTGTTACATTTGACAATCTTGCAAGATGGAAATCTCTGCTAAATGATTGCGCTG GGGCTGAGGAAAATTTTGTAAGTTCTATTATCAACTACGACATAGCACTTGAACTGTCACCCGATTATTTTGGGGGCTAT TTCGCGAAAGGCAATACTTTGTTCGCTAGCTATCGTAATCTTTTGAAAATGGATCGATATCCTGAGGCGCTGCAAAGATT GAATGAAGCTGTTGAAGCGTATAGCGAAGCTTTGCAGCGCATTCCCAATAATATAAACTGCATTAAAATGAAGGGTTTGG CTTTGTTTGAAGCTGTTTATCTTTCGAGTTACCTTAGCCTGTCTGATTCTGTTAGCCTGTTCTTGCAGAATGCATTAGTT GCTTTTGAGACATATCTTCAAAACTGCCCAGACGACCTCGATATGCAAGAAAAACTGTCCTGTCTAAGGAGTTTTTCCGA TTAA
Upstream 100 bases:
>100_bases CCAATCCTGAGTCCTGGTTCCGCTAGGTCTGACTGAGGGCAACAAGCCTGTTCAGAATTTTCGATAAAGTCGTAGTCGTT TGGCGAGGAAGAAAGAAGGA
Downstream 100 bases:
>100_bases GACCTGCTTAACTTAATAATGTGTAATTTGTTCGCATATTGGAGCCCCGAGGATGACTCACATCACCGTTGATCTACCTG AAACTGTGTTCTCTGCACTT
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Family; Tetratricopeptide TPR_2 Repeat Protein
Number of amino acids: Translated: 907; Mature: 906
Protein sequence:
>907_residues MPDGITEEYFALQHFTNRHSLTRRFATRLHSNPTPQTVLCLHGDGGNGKSLLLRYWYESACKLFQDWEQANANDDDRDFV NRLTALPNSHYLPILSVFHDFGQPGCNEEQPQHDLYGTLMIHNALVQAAITRGLKHCFVFPRFSFAIAWSLHRTGKSKQE IRPLFPTDAVFDFVAAIVDSAIGIPIATAGNAVRRIIANYTLPTDEQQLRVQFEGQLDEHWMRELCQRNPRRDLLPKLPE LLAKDINDAMARFPKARIVLLFDAHQAFWGTEQDAAPGSYHQRDEWFRRFLLSLDLAGGIVVVVASREPPRWSEASRHPI SRKHLESELVGHLTEADGREYLQKLNISTPTLQSSMLRYASVRDGEIHPLYLALCADLVLAARNQEEEIQADTFAQSASQ TNKPRELLERLTHYANEKLLDILEALSACRSFDLSVFRVLGQSLNFDTDDATFRVLCRYSFVWPTQNRNGSYRIHDLMRR LNTQFDTELTRRAHELLIDYYQREGNLAESIYHCYCLDQKQGIASWWPEFLRAERFGNYELCRNLLDVLVLMDISGLDKV TVLLSVGLYFANLGQLDEARSRFTEAIDVSDELLALEPQNVSFVVNKSSALMDLADIQARTVGVDEAIQVLRQAIAVVEN ALESGLGNTTDDDKYLTVNKLRGLFDLAVLLKYVSILEAKERLNEALLLCRETLLIFPDFTSVLFRSGLILDHLARMAEH EPQLSNPEDIYNESISTYDRLLELQPENFNGYKNRAVTFDNLARWKSLLNDCAGAEENFVSSIINYDIALELSPDYFGGY FAKGNTLFASYRNLLKMDRYPEALQRLNEAVEAYSEALQRIPNNINCIKMKGLALFEAVYLSSYLSLSDSVSLFLQNALV AFETYLQNCPDDLDMQEKLSCLRSFSD
Sequences:
>Translated_907_residues MPDGITEEYFALQHFTNRHSLTRRFATRLHSNPTPQTVLCLHGDGGNGKSLLLRYWYESACKLFQDWEQANANDDDRDFV NRLTALPNSHYLPILSVFHDFGQPGCNEEQPQHDLYGTLMIHNALVQAAITRGLKHCFVFPRFSFAIAWSLHRTGKSKQE IRPLFPTDAVFDFVAAIVDSAIGIPIATAGNAVRRIIANYTLPTDEQQLRVQFEGQLDEHWMRELCQRNPRRDLLPKLPE LLAKDINDAMARFPKARIVLLFDAHQAFWGTEQDAAPGSYHQRDEWFRRFLLSLDLAGGIVVVVASREPPRWSEASRHPI SRKHLESELVGHLTEADGREYLQKLNISTPTLQSSMLRYASVRDGEIHPLYLALCADLVLAARNQEEEIQADTFAQSASQ TNKPRELLERLTHYANEKLLDILEALSACRSFDLSVFRVLGQSLNFDTDDATFRVLCRYSFVWPTQNRNGSYRIHDLMRR LNTQFDTELTRRAHELLIDYYQREGNLAESIYHCYCLDQKQGIASWWPEFLRAERFGNYELCRNLLDVLVLMDISGLDKV TVLLSVGLYFANLGQLDEARSRFTEAIDVSDELLALEPQNVSFVVNKSSALMDLADIQARTVGVDEAIQVLRQAIAVVEN ALESGLGNTTDDDKYLTVNKLRGLFDLAVLLKYVSILEAKERLNEALLLCRETLLIFPDFTSVLFRSGLILDHLARMAEH EPQLSNPEDIYNESISTYDRLLELQPENFNGYKNRAVTFDNLARWKSLLNDCAGAEENFVSSIINYDIALELSPDYFGGY FAKGNTLFASYRNLLKMDRYPEALQRLNEAVEAYSEALQRIPNNINCIKMKGLALFEAVYLSSYLSLSDSVSLFLQNALV AFETYLQNCPDDLDMQEKLSCLRSFSD >Mature_906_residues PDGITEEYFALQHFTNRHSLTRRFATRLHSNPTPQTVLCLHGDGGNGKSLLLRYWYESACKLFQDWEQANANDDDRDFVN RLTALPNSHYLPILSVFHDFGQPGCNEEQPQHDLYGTLMIHNALVQAAITRGLKHCFVFPRFSFAIAWSLHRTGKSKQEI RPLFPTDAVFDFVAAIVDSAIGIPIATAGNAVRRIIANYTLPTDEQQLRVQFEGQLDEHWMRELCQRNPRRDLLPKLPEL LAKDINDAMARFPKARIVLLFDAHQAFWGTEQDAAPGSYHQRDEWFRRFLLSLDLAGGIVVVVASREPPRWSEASRHPIS RKHLESELVGHLTEADGREYLQKLNISTPTLQSSMLRYASVRDGEIHPLYLALCADLVLAARNQEEEIQADTFAQSASQT NKPRELLERLTHYANEKLLDILEALSACRSFDLSVFRVLGQSLNFDTDDATFRVLCRYSFVWPTQNRNGSYRIHDLMRRL NTQFDTELTRRAHELLIDYYQREGNLAESIYHCYCLDQKQGIASWWPEFLRAERFGNYELCRNLLDVLVLMDISGLDKVT VLLSVGLYFANLGQLDEARSRFTEAIDVSDELLALEPQNVSFVVNKSSALMDLADIQARTVGVDEAIQVLRQAIAVVENA LESGLGNTTDDDKYLTVNKLRGLFDLAVLLKYVSILEAKERLNEALLLCRETLLIFPDFTSVLFRSGLILDHLARMAEHE PQLSNPEDIYNESISTYDRLLELQPENFNGYKNRAVTFDNLARWKSLLNDCAGAEENFVSSIINYDIALELSPDYFGGYF AKGNTLFASYRNLLKMDRYPEALQRLNEAVEAYSEALQRIPNNINCIKMKGLALFEAVYLSSYLSLSDSVSLFLQNALVA FETYLQNCPDDLDMQEKLSCLRSFSD
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103495; Mature: 103364
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDGITEEYFALQHFTNRHSLTRRFATRLHSNPTPQTVLCLHGDGGNGKSLLLRYWYESA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH CKLFQDWEQANANDDDRDFVNRLTALPNSHYLPILSVFHDFGQPGCNEEQPQHDLYGTLM HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH IHNALVQAAITRGLKHCFVFPRFSFAIAWSLHRTGKSKQEIRPLFPTDAVFDFVAAIVDS HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHH AIGIPIATAGNAVRRIIANYTLPTDEQQLRVQFEGQLDEHWMRELCQRNPRRDLLPKLPE HCCCCEECCCHHHHHHHHHCCCCCCCHHEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHH LLAKDINDAMARFPKARIVLLFDAHQAFWGTEQDAAPGSYHQRDEWFRRFLLSLDLAGGI HHHHHHHHHHHHCCCCEEEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE VVVVASREPPRWSEASRHPISRKHLESELVGHLTEADGREYLQKLNISTPTLQSSMLRYA EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHH SVRDGEIHPLYLALCADLVLAARNQEEEIQADTFAQSASQTNKPRELLERLTHYANEKLL HCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DILEALSACRSFDLSVFRVLGQSLNFDTDDATFRVLCRYSFVWPTQNRNGSYRIHDLMRR HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHH LNTQFDTELTRRAHELLIDYYQREGNLAESIYHCYCLDQKQGIASWWPEFLRAERFGNYE HCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHH LCRNLLDVLVLMDISGLDKVTVLLSVGLYFANLGQLDEARSRFTEAIDVSDELLALEPQN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHEEECCCC VSFVVNKSSALMDLADIQARTVGVDEAIQVLRQAIAVVENALESGLGNTTDDDKYLTVNK CEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH LRGLFDLAVLLKYVSILEAKERLNEALLLCRETLLIFPDFTSVLFRSGLILDHLARMAEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHC EPQLSNPEDIYNESISTYDRLLELQPENFNGYKNRAVTFDNLARWKSLLNDCAGAEENFV CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH SSIINYDIALELSPDYFGGYFAKGNTLFASYRNLLKMDRYPEALQRLNEAVEAYSEALQR HHHHCCCEEEEECCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IPNNINCIKMKGLALFEAVYLSSYLSLSDSVSLFLQNALVAFETYLQNCPDDLDMQEKLS CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH CLRSFSD HHHHCCC >Mature Secondary Structure PDGITEEYFALQHFTNRHSLTRRFATRLHSNPTPQTVLCLHGDGGNGKSLLLRYWYESA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH CKLFQDWEQANANDDDRDFVNRLTALPNSHYLPILSVFHDFGQPGCNEEQPQHDLYGTLM HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH IHNALVQAAITRGLKHCFVFPRFSFAIAWSLHRTGKSKQEIRPLFPTDAVFDFVAAIVDS HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHH AIGIPIATAGNAVRRIIANYTLPTDEQQLRVQFEGQLDEHWMRELCQRNPRRDLLPKLPE HCCCCEECCCHHHHHHHHHCCCCCCCHHEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHH LLAKDINDAMARFPKARIVLLFDAHQAFWGTEQDAAPGSYHQRDEWFRRFLLSLDLAGGI HHHHHHHHHHHHCCCCEEEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE VVVVASREPPRWSEASRHPISRKHLESELVGHLTEADGREYLQKLNISTPTLQSSMLRYA EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHH SVRDGEIHPLYLALCADLVLAARNQEEEIQADTFAQSASQTNKPRELLERLTHYANEKLL HCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DILEALSACRSFDLSVFRVLGQSLNFDTDDATFRVLCRYSFVWPTQNRNGSYRIHDLMRR HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHH LNTQFDTELTRRAHELLIDYYQREGNLAESIYHCYCLDQKQGIASWWPEFLRAERFGNYE HCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHH LCRNLLDVLVLMDISGLDKVTVLLSVGLYFANLGQLDEARSRFTEAIDVSDELLALEPQN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHEEECCCC VSFVVNKSSALMDLADIQARTVGVDEAIQVLRQAIAVVENALESGLGNTTDDDKYLTVNK CEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH LRGLFDLAVLLKYVSILEAKERLNEALLLCRETLLIFPDFTSVLFRSGLILDHLARMAEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHC EPQLSNPEDIYNESISTYDRLLELQPENFNGYKNRAVTFDNLARWKSLLNDCAGAEENFV CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH SSIINYDIALELSPDYFGGYFAKGNTLFASYRNLLKMDRYPEALQRLNEAVEAYSEALQR HHHHCCCEEEEECCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IPNNINCIKMKGLALFEAVYLSSYLSLSDSVSLFLQNALVAFETYLQNCPDDLDMQEKLS CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH CLRSFSD HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA