| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is gltX
Identifier: 37521947
GI number: 37521947
Start: 2536374
End: 2537966
Strand: Reverse
Name: gltX
Synonym: gvip330
Alternate gene names: 37521947
Gene position: 2537966-2536374 (Counterclockwise)
Preceding gene: 37521952
Following gene: 37521943
Centisome position: 54.47
GC content: 63.78
Gene sequence:
>1593_bases ATGAATTTTGAGCAGTACGAGTCCGCCTACCCGCCCCGGGCTTTACCCCCGGGCGCGTGGGTGACCCGCATCGGGCCGAG CCCGACGGGCAAGGCCCACATCGGCACGGCCCTGCAGGCGGTGATCAACCGGTCCCTGGCCGACGGCAGCGGCGGCGCCT TTTTGCTGCGCATCGAGGACACCGACCGCGAGCGCTTCGTCGAAGGCGCCATCGAAGATCTGCTCGCGGCCCTCGACTGG TTGGGGATCCGGCCGGACGAAAGCGTCGCCCATGGCGGGGCCTACGGCCCCTATGTCCAGAGCGAGCGGCTGCCCATCTA CCAGGCGGCCGCCCGGCAACTGGTGGAAGTGGGGCACGCCTACTATTGTTTTTGCACGCCGGAGCGGCTCGAATCGGTGC GCATGGCCCAGCAGGCGGCGGGCAAACCGACCATGTACGATCGCCACTGCCGCAATCTGGGTCGCGAGGAAGTCGAGAAG CGGCTCGCGACCGGTGAAAAAGCGGTCGTGCGCCTGAAGGTGCCCGACGGCACCGAGATCGCCTTCGACGATCTGGCGCG CGGCCGGATCGCCTTCGAGTCCCAGACGATCGACGACAGCGTGCTGCTCAAGTCCGACGGCTTTCCCACCTACCACCTGG CGGTGGTGGTGGACGATCACCTGATGCGGGTGAATCAGATTATCCGTGGCGAGGAGTGGATTCCTTCGACCCCCAAGCAC GTGCTTTTGTACCAGTACTTTGGCTGGCCGATGCCGCGCATCGCCCACACGCCCATCCTGCGCGACATGAGCCGCCGCAA ACTCTCCAAGCGCAGCGGCGACACGTCGATCACCGGCTATCGGGTGCAGGGGTACTTGCCCGAGGGGCTGCGCAACTTTC TCACGCGGATCATCTGGCCCCACCCGGAGGGCAAGGACGTCTACGACCACGAAGAATTCGTGCGGTTATTCAAGGCGGAA GATCTGCCCAACACCGGTCCCATCGTCGATCCACAGCTGCTCGATTTCATCAACGGCCAGTATCTGCGCCGACTTTCGTC TGCAGAACTTTACACCGCGACGGTGGAATATCTGAAATTCTTGCTGGGCTTGCATCAGGACATCATCTTCGAGACTTACC ACCCTTCTGCTCCCATCAAACAGACCCTGACGCGCGCCGAACTGGGATCGTTCTATTCGGCGTTCACGGCCAACCCGACT TACACCGAGCGGGTACTGACATTGGAGCCGGAGCGCTACAAGCGCCTGAGCGACATTGTCGTCAGTACCGGCTTTTTCTT CCCAGCGTTGTTTACCCCGGCGGACCCGAAACTCCTCGCCAAACCCCTGGGAAGCCCCGAGAAGGCAGGAGCATTGCTGG GTGAATACCTGAGACTCTACCGGCCGGACGCCGCGCAGGCCGAGTGGGAGCAGAGCGTGCGCGAACTGGCCCACGAAGCC GGGGTCAAAGACGGCAAGCTCTTCATGACCCTCCGCGTCGCCGTCACCGGCCGCGAGCAGACACCGCCCCTGTTCGAGGT GCTCACGATCCTGGGAGGAGACGAGGTGCAGCGCCGCCTAGAACTGGCTGCTGCGATGCCGGTGTCTCTGTAG
Upstream 100 bases:
>100_bases CCCTCCAGTATCCTCCCGCTTTCGGCAGAGGTGCCTACCCGCTCCCCGGGCCCCACCGCCCGGGTATAAAATGTGACAGC GCGCAACATTCGAGGGGCCG
Downstream 100 bases:
>100_bases ACAGTGCCGGTGTTTGTTTCGCTAACGGCCCTTGCCCAGATAAAACGTCTCGATGCTGCGCTTGTCGCCCACGTAGCGCC AGTGCCAGGGCTCGTAGCTC
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MNFEQYESAYPPRALPPGAWVTRIGPSPTGKAHIGTALQAVINRSLADGSGGAFLLRIEDTDRERFVEGAIEDLLAALDW LGIRPDESVAHGGAYGPYVQSERLPIYQAAARQLVEVGHAYYCFCTPERLESVRMAQQAAGKPTMYDRHCRNLGREEVEK RLATGEKAVVRLKVPDGTEIAFDDLARGRIAFESQTIDDSVLLKSDGFPTYHLAVVVDDHLMRVNQIIRGEEWIPSTPKH VLLYQYFGWPMPRIAHTPILRDMSRRKLSKRSGDTSITGYRVQGYLPEGLRNFLTRIIWPHPEGKDVYDHEEFVRLFKAE DLPNTGPIVDPQLLDFINGQYLRRLSSAELYTATVEYLKFLLGLHQDIIFETYHPSAPIKQTLTRAELGSFYSAFTANPT YTERVLTLEPERYKRLSDIVVSTGFFFPALFTPADPKLLAKPLGSPEKAGALLGEYLRLYRPDAAQAEWEQSVRELAHEA GVKDGKLFMTLRVAVTGREQTPPLFEVLTILGGDEVQRRLELAAAMPVSL
Sequences:
>Translated_530_residues MNFEQYESAYPPRALPPGAWVTRIGPSPTGKAHIGTALQAVINRSLADGSGGAFLLRIEDTDRERFVEGAIEDLLAALDW LGIRPDESVAHGGAYGPYVQSERLPIYQAAARQLVEVGHAYYCFCTPERLESVRMAQQAAGKPTMYDRHCRNLGREEVEK RLATGEKAVVRLKVPDGTEIAFDDLARGRIAFESQTIDDSVLLKSDGFPTYHLAVVVDDHLMRVNQIIRGEEWIPSTPKH VLLYQYFGWPMPRIAHTPILRDMSRRKLSKRSGDTSITGYRVQGYLPEGLRNFLTRIIWPHPEGKDVYDHEEFVRLFKAE DLPNTGPIVDPQLLDFINGQYLRRLSSAELYTATVEYLKFLLGLHQDIIFETYHPSAPIKQTLTRAELGSFYSAFTANPT YTERVLTLEPERYKRLSDIVVSTGFFFPALFTPADPKLLAKPLGSPEKAGALLGEYLRLYRPDAAQAEWEQSVRELAHEA GVKDGKLFMTLRVAVTGREQTPPLFEVLTILGGDEVQRRLELAAAMPVSL >Mature_530_residues MNFEQYESAYPPRALPPGAWVTRIGPSPTGKAHIGTALQAVINRSLADGSGGAFLLRIEDTDRERFVEGAIEDLLAALDW LGIRPDESVAHGGAYGPYVQSERLPIYQAAARQLVEVGHAYYCFCTPERLESVRMAQQAAGKPTMYDRHCRNLGREEVEK RLATGEKAVVRLKVPDGTEIAFDDLARGRIAFESQTIDDSVLLKSDGFPTYHLAVVVDDHLMRVNQIIRGEEWIPSTPKH VLLYQYFGWPMPRIAHTPILRDMSRRKLSKRSGDTSITGYRVQGYLPEGLRNFLTRIIWPHPEGKDVYDHEEFVRLFKAE DLPNTGPIVDPQLLDFINGQYLRRLSSAELYTATVEYLKFLLGLHQDIIFETYHPSAPIKQTLTRAELGSFYSAFTANPT YTERVLTLEPERYKRLSDIVVSTGFFFPALFTPADPKLLAKPLGSPEKAGALLGEYLRLYRPDAAQAEWEQSVRELAHEA GVKDGKLFMTLRVAVTGREQTPPLFEVLTILGGDEVQRRLELAAAMPVSL
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=506, Percent_Identity=34.3873517786561, Blast_Score=268, Evalue=1e-71, Organism=Escherichia coli, GI1788743, Length=510, Percent_Identity=32.3529411764706, Blast_Score=240, Evalue=2e-64, Organism=Escherichia coli, GI226510925, Length=254, Percent_Identity=34.6456692913386, Blast_Score=126, Evalue=4e-30, Organism=Caenorhabditis elegans, GI71993394, Length=510, Percent_Identity=31.5686274509804, Blast_Score=249, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6324540, Length=515, Percent_Identity=34.9514563106796, Blast_Score=265, Evalue=1e-71, Organism=Drosophila melanogaster, GI24665321, Length=510, Percent_Identity=34.9019607843137, Blast_Score=251, Evalue=1e-66,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_GLOVI (Q7NI06)
Other databases:
- EMBL: BA000045 - RefSeq: NP_925324.1 - ProteinModelPortal: Q7NI06 - SMR: Q7NI06 - GeneID: 2600779 - GenomeReviews: BA000045_GR - NMPDR: fig|251221.1.peg.2378 - HOGENOM: HBG628189 - OMA: NELIRES - BioCyc: GVIO251221:GLL2378-MONOMER - BRENDA: 6.1.1.17 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 59559; Mature: 59559
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 270-270
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFEQYESAYPPRALPPGAWVTRIGPSPTGKAHIGTALQAVINRSLADGSGGAFLLRIED CCHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEC TDRERFVEGAIEDLLAALDWLGIRPDESVAHGGAYGPYVQSERLPIYQAAARQLVEVGHA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE YYCFCTPERLESVRMAQQAAGKPTMYDRHCRNLGREEVEKRLATGEKAVVRLKVPDGTEI EEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCEEEEEEECCCCCCE AFDDLARGRIAFESQTIDDSVLLKSDGFPTYHLAVVVDDHLMRVNQIIRGEEWIPSTPKH EHHHHHCCEEEECCCCCCCCEEEECCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCCC VLLYQYFGWPMPRIAHTPILRDMSRRKLSKRSGDTSITGYRVQGYLPEGLRNFLTRIIWP EEEEHHHCCCCCHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCC HPEGKDVYDHEEFVRLFKAEDLPNTGPIVDPQLLDFINGQYLRRLSSAELYTATVEYLKF CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHHHHHCCHHHHHHHHHHHH LLGLHQDIIFETYHPSAPIKQTLTRAELGSFYSAFTANPTYTERVLTLEPERYKRLSDIV HHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCEEEEECHHHHHHHHHHH VSTGFFFPALFTPADPKLLAKPLGSPEKAGALLGEYLRLYRPDAAQAEWEQSVRELAHEA HHHCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GVKDGKLFMTLRVAVTGREQTPPLFEVLTILGGDEVQRRLELAAAMPVSL CCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNFEQYESAYPPRALPPGAWVTRIGPSPTGKAHIGTALQAVINRSLADGSGGAFLLRIED CCHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEC TDRERFVEGAIEDLLAALDWLGIRPDESVAHGGAYGPYVQSERLPIYQAAARQLVEVGHA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE YYCFCTPERLESVRMAQQAAGKPTMYDRHCRNLGREEVEKRLATGEKAVVRLKVPDGTEI EEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCEEEEEEECCCCCCE AFDDLARGRIAFESQTIDDSVLLKSDGFPTYHLAVVVDDHLMRVNQIIRGEEWIPSTPKH EHHHHHCCEEEECCCCCCCCEEEECCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCCC VLLYQYFGWPMPRIAHTPILRDMSRRKLSKRSGDTSITGYRVQGYLPEGLRNFLTRIIWP EEEEHHHCCCCCHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCC HPEGKDVYDHEEFVRLFKAEDLPNTGPIVDPQLLDFINGQYLRRLSSAELYTATVEYLKF CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHHHHHCCHHHHHHHHHHHH LLGLHQDIIFETYHPSAPIKQTLTRAELGSFYSAFTANPTYTERVLTLEPERYKRLSDIV HHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCEEEEECHHHHHHHHHHH VSTGFFFPALFTPADPKLLAKPLGSPEKAGALLGEYLRLYRPDAAQAEWEQSVRELAHEA HHHCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GVKDGKLFMTLRVAVTGREQTPPLFEVLTILGGDEVQRRLELAAAMPVSL CCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14621292