| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37521317
Identifier: 37521317
GI number: 37521317
Start: 1853615
End: 1854634
Strand: Direct
Name: 37521317
Synonym: glr1748
Alternate gene names: NA
Gene position: 1853615-1854634 (Clockwise)
Preceding gene: 37521316
Following gene: 37521318
Centisome position: 39.79
GC content: 60.0
Gene sequence:
>1020_bases ATGGCGGTTAGTCTCAAACAAGCGTTCGAAGTCGGAAAGTATTTGATTTCCCAGCGTCTCGCGGGCCGCGAGCGCTTCCC GCTGGTGTTGATGCTCGAGCCGCTGTTTCGCTGCAATTTGGCTTGCCCAGGCTGCGGCAAGATTCAGCACCCGGGCGAGA TTTTGCGGCGCAACCTGACGCCTGAGGAGTGCTCTCGGGCGGTGGAGGAGTGCGGCGCTCCGATCGTCACCATCCCGGGA GGCGAACCGCTGCTGCACCCGCAGATCGACCAGATTGTCGAGGGGCTGGTCGACCGCGGCAAGTTCGTCTATCTGTGCAC CAACGCCATCTTGCTCGAAAAAAATCTTGACAAATTCACACCCTCCGATTATTTCAGCTTCAGTGTGCATCTCGACGGTT TGCGCGAGGAGCACGACCAGGCGGTAGACCGCGAGGGCGTCTTCGATATCGCCATGCGGGCCATCAAAGCGGCAAAGGCG CGCGGCTTCCGGGTGACCACCAACACGACCATCTTCAACAACGCCGATCCGCAGCGGGTGCGGGAATTTTTCGATTTTCT GGGCGGACTCGACATCGACGGCATGATGGTCTCGCCCGGCTACAGCTACGAGTGGGCGCCCGATCAGGAGCACTTTTTGC AGCGCGATCAGACCCGAGCACTTTTTCGCGAGATTCTTGCTCCCTACCGTTCGGGGGAGGCGCGCTGGAACTTCAATCAC AATCCGCTGTTTCTCGATTTTCTCGAAGGGCTCAAAGATTACGAGTGCACCCCCTGGGGAATGCCCAGCTACAGCGTGCT GGGCTGGCAGAAACCCTGCTATCTGCTCAACGAAGGTCACTACGCCACCTGGCAGGAACTGCTCGACAACACCCGCTGGG AGGATTACGGACATGCCAGCGGCAACCCCAAGTGCCGCGACTGCATGGTCCACTGCGGCTATGAGCAGACTGCCGCCATC GACGCGATGGAAATCGCCAACATCCCGCGGGTGCTTGCCAGCGTCATCACCGGCCGCTGA
Upstream 100 bases:
>100_bases GAACTGGGGCTGCCCCAGACCCCCGTCCGGGAAGCGCTCGTCGATGCCGTAGACTGGTTTAGAAAGAACGGATACATCGG CAACGGGGGGGGATTCCGGC
Downstream 100 bases:
>100_bases CGGTCGATGATCCGCTCGCTGGTCTGGTTTCGCAAGGGTTTGCGACTACACGACAATCCGGCATTACTAGATGCAGCCCG GGACGCTGCGCGGCTCTACC
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Radical SAM Domain Protein; Molybdenum Cofactor Biosynthesis Protein A; MoaA/NifB/PqqE Family Protein; MoaA NifB PqqE Radical SAM Superfamily Protein; Radical S-Adenosylmethionine Superfamily Protein; Iron-Sulfur Oxidoreductase; MoaA/NifB/PqqE Family Fe-S Oxidoreductase; Radical SAM Oxidoreductase; Heme D1 Biosynthesis Protein NirJ; Heme D1 Biosynthesis Protein; Hopanoid Biosynthesis Associated Radical SAM Protein; Fe-S Oxidoreductase; Radical SAM Protein; Radical SAM Superfamily; Radical SAM; Radical SAM Family Fe-S Protein
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MAVSLKQAFEVGKYLISQRLAGRERFPLVLMLEPLFRCNLACPGCGKIQHPGEILRRNLTPEECSRAVEECGAPIVTIPG GEPLLHPQIDQIVEGLVDRGKFVYLCTNAILLEKNLDKFTPSDYFSFSVHLDGLREEHDQAVDREGVFDIAMRAIKAAKA RGFRVTTNTTIFNNADPQRVREFFDFLGGLDIDGMMVSPGYSYEWAPDQEHFLQRDQTRALFREILAPYRSGEARWNFNH NPLFLDFLEGLKDYECTPWGMPSYSVLGWQKPCYLLNEGHYATWQELLDNTRWEDYGHASGNPKCRDCMVHCGYEQTAAI DAMEIANIPRVLASVITGR
Sequences:
>Translated_339_residues MAVSLKQAFEVGKYLISQRLAGRERFPLVLMLEPLFRCNLACPGCGKIQHPGEILRRNLTPEECSRAVEECGAPIVTIPG GEPLLHPQIDQIVEGLVDRGKFVYLCTNAILLEKNLDKFTPSDYFSFSVHLDGLREEHDQAVDREGVFDIAMRAIKAAKA RGFRVTTNTTIFNNADPQRVREFFDFLGGLDIDGMMVSPGYSYEWAPDQEHFLQRDQTRALFREILAPYRSGEARWNFNH NPLFLDFLEGLKDYECTPWGMPSYSVLGWQKPCYLLNEGHYATWQELLDNTRWEDYGHASGNPKCRDCMVHCGYEQTAAI DAMEIANIPRVLASVITGR >Mature_338_residues AVSLKQAFEVGKYLISQRLAGRERFPLVLMLEPLFRCNLACPGCGKIQHPGEILRRNLTPEECSRAVEECGAPIVTIPGG EPLLHPQIDQIVEGLVDRGKFVYLCTNAILLEKNLDKFTPSDYFSFSVHLDGLREEHDQAVDREGVFDIAMRAIKAAKAR GFRVTTNTTIFNNADPQRVREFFDFLGGLDIDGMMVSPGYSYEWAPDQEHFLQRDQTRALFREILAPYRSGEARWNFNHN PLFLDFLEGLKDYECTPWGMPSYSVLGWQKPCYLLNEGHYATWQELLDNTRWEDYGHASGNPKCRDCMVHCGYEQTAAID AMEIANIPRVLASVITGR
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38547; Mature: 38416
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSLKQAFEVGKYLISQRLAGRERFPLVLMLEPLFRCNLACPGCGKIQHPGEILRRNLT CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCCCCCCCCHHHHHCCCC PEECSRAVEECGAPIVTIPGGEPLLHPQIDQIVEGLVDRGKFVYLCTNAILLEKNLDKFT HHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCEEEEECCCCCCC PSDYFSFSVHLDGLREEHDQAVDREGVFDIAMRAIKAAKARGFRVTTNTTIFNNADPQRV CCCCEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCEEECCCCHHHH REFFDFLGGLDIDGMMVSPGYSYEWAPDQEHFLQRDQTRALFREILAPYRSGEARWNFNH HHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC NPLFLDFLEGLKDYECTPWGMPSYSVLGWQKPCYLLNEGHYATWQELLDNTRWEDYGHAS CCCHHHHHHCHHCCCCCCCCCCCCCEECCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCC GNPKCRDCMVHCGYEQTAAIDAMEIANIPRVLASVITGR CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AVSLKQAFEVGKYLISQRLAGRERFPLVLMLEPLFRCNLACPGCGKIQHPGEILRRNLT CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCCCCCCCCHHHHHCCCC PEECSRAVEECGAPIVTIPGGEPLLHPQIDQIVEGLVDRGKFVYLCTNAILLEKNLDKFT HHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCEEEEECCCCCCC PSDYFSFSVHLDGLREEHDQAVDREGVFDIAMRAIKAAKARGFRVTTNTTIFNNADPQRV CCCCEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCEEECCCCHHHH REFFDFLGGLDIDGMMVSPGYSYEWAPDQEHFLQRDQTRALFREILAPYRSGEARWNFNH HHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC NPLFLDFLEGLKDYECTPWGMPSYSVLGWQKPCYLLNEGHYATWQELLDNTRWEDYGHAS CCCHHHHHHCHHCCCCCCCCCCCCCEECCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCC GNPKCRDCMVHCGYEQTAAIDAMEIANIPRVLASVITGR CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA