Click here to switch to the map view.

The map label for this gene is tonB2 [H]

Identifier: 37520958

GI number: 37520958

Start: 1492134

End: 1492832

Strand: Direct

Name: tonB2 [H]

Synonym: glr1389

Alternate gene names: 37520958

Gene position: 1492134-1492832 (Clockwise)

Preceding gene: 37520957

Following gene: 37520959

Centisome position: 32.03

GC content: 65.81

Gene sequence:

>699_bases
GTGGTAGGCTCCGCCCTCCTCCACGCCGGACTGTTCGCCCTCAAACTGCCCGAACCGAAGCCTCCCGAAATCCCCAAGGC
CCAAAAAATGGTCATGGTCGAGACGGCTCCCAAACTGCCGCCTCCCAAACCAAAAGTCGAACCGCCCAAACCGAAACCGC
CCGAACCGAAGAGCTTCTCCAGAAAGCCCGTTCCCAAAAAGAGCGCCCCCCAAAAGGCCAAAGCCTCGCGGACGATCCTC
TCTTCCAAGGCGGTGAGCGCCGATGCGGGCACAGTCAGCGAAAACCAACTGGCCGGTTCGCGCGGCACCGGCTACGGCAC
CGAAAAGGGCGACGATTTTGGCAGCATTGCGCCTCTGGGTGTCGATGGCGGCAGCGGCGGGACGGACGTGGTGGAGACGC
CGCCGCCGCCCCCACCGCCGCCGCCGCCGTTGGTGAACGCCCGTCCGAAGGGGGCGGTGCAGCCGGAGTACCCGGAAATC
GCCCAGCAGAACAACTGGGAAGGTCGGGTAATCGTCAAGGCTTACATCAACGCGGACGGTTCGGTGGGCGAGGTGCAGGT
GGCCAAATCTTCCGGGCACAGCGAGTTGGACAATGCGGCGCTGGCGGCGGTGCGCAACACGAAGTTCGAGCCGGCGCGGC
GGGGGGAGGAGTCGGTGGGGGCGTGGGTGCGCATCCCGGTCACCTTCTCCCTGCAGTAG

Upstream 100 bases:

>100_bases
AACATCCTCGACGAACTCAGGCAGGTCAATGCAACCCGGATCGCTATGGCAACGGACACCAAATGACGACGACGGTGGCC
TCAAACTCATCCTCGCCTGC

Downstream 100 bases:

>100_bases
CTTCCAGTTGTCTTGATCCCAGCCTGCGGGCGGCGGTATCGTACCGCCGCCCGCGTTGTTTTAGCCCGGCCACGCCGATG
GACCCGGAGGCTATTACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MVGSALLHAGLFALKLPEPKPPEIPKAQKMVMVETAPKLPPPKPKVEPPKPKPPEPKSFSRKPVPKKSAPQKAKASRTIL
SSKAVSADAGTVSENQLAGSRGTGYGTEKGDDFGSIAPLGVDGGSGGTDVVETPPPPPPPPPPLVNARPKGAVQPEYPEI
AQQNNWEGRVIVKAYINADGSVGEVQVAKSSGHSELDNAALAAVRNTKFEPARRGEESVGAWVRIPVTFSLQ

Sequences:

>Translated_232_residues
MVGSALLHAGLFALKLPEPKPPEIPKAQKMVMVETAPKLPPPKPKVEPPKPKPPEPKSFSRKPVPKKSAPQKAKASRTIL
SSKAVSADAGTVSENQLAGSRGTGYGTEKGDDFGSIAPLGVDGGSGGTDVVETPPPPPPPPPPLVNARPKGAVQPEYPEI
AQQNNWEGRVIVKAYINADGSVGEVQVAKSSGHSELDNAALAAVRNTKFEPARRGEESVGAWVRIPVTFSLQ
>Mature_232_residues
MVGSALLHAGLFALKLPEPKPPEIPKAQKMVMVETAPKLPPPKPKVEPPKPKPPEPKSFSRKPVPKKSAPQKAKASRTIL
SSKAVSADAGTVSENQLAGSRGTGYGTEKGDDFGSIAPLGVDGGSGGTDVVETPPPPPPPPPPLVNARPKGAVQPEYPEI
AQQNNWEGRVIVKAYINADGSVGEVQVAKSSGHSELDNAALAAVRNTKFEPARRGEESVGAWVRIPVTFSLQ

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 24273; Mature: 24273

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGSALLHAGLFALKLPEPKPPEIPKAQKMVMVETAPKLPPPKPKVEPPKPKPPEPKSFS
CCCHHHHHHCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
RKPVPKKSAPQKAKASRTILSSKAVSADAGTVSENQLAGSRGTGYGTEKGDDFGSIAPLG
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
VDGGSGGTDVVETPPPPPPPPPPLVNARPKGAVQPEYPEIAQQNNWEGRVIVKAYINADG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEECCCC
SVGEVQVAKSSGHSELDNAALAAVRNTKFEPARRGEESVGAWVRIPVTFSLQ
CCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MVGSALLHAGLFALKLPEPKPPEIPKAQKMVMVETAPKLPPPKPKVEPPKPKPPEPKSFS
CCCHHHHHHCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
RKPVPKKSAPQKAKASRTILSSKAVSADAGTVSENQLAGSRGTGYGTEKGDDFGSIAPLG
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
VDGGSGGTDVVETPPPPPPPPPPLVNARPKGAVQPEYPEIAQQNNWEGRVIVKAYINADG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEECCCC
SVGEVQVAKSSGHSELDNAALAAVRNTKFEPARRGEESVGAWVRIPVTFSLQ
CCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10689178; 10984043 [H]