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The map label for this gene is exbD [C]

Identifier: 37520957

GI number: 37520957

Start: 1491680

End: 1492099

Strand: Direct

Name: exbD [C]

Synonym: glr1388

Alternate gene names: 37520957

Gene position: 1491680-1492099 (Clockwise)

Preceding gene: 37520956

Following gene: 37520958

Centisome position: 32.02

GC content: 55.71

Gene sequence:

>420_bases
ATGACGATCAAGCTCAGCGACAGCGACGGCGACGAGGGTGGAGCGGGCGAGATCAACATGGTGCCGCTCATCGACGTGCT
GTTTTCGATTTTGACGTTTTTTGTGCTGGCGTCGATTTTCTTGACGCGTCAGCAGGGGCTCTCGCTGGATCTGCCGACCG
CGAAGGCTGCCAAGACCACCCAGATGAGCGAGCAGGTGACCCTCTCGGTGACCAAAGAGGGCAAGTTCTTCCTCAATAAA
GAATCCATCGATCTCAAGAGCATCGGTCCGGCGATCAAAGCGGTAGTGGAAAGAGATCCCGATCGCCTTATCGTCATCGC
GGGCGACAAGTCAGTCCGCTACAAGCACATTGTCAACATCCTCGACGAACTCAGGCAGGTCAATGCAACCCGGATCGCTA
TGGCAACGGACACCAAATGA

Upstream 100 bases:

>100_bases
TGTTTCGGGCGTTGGCCCGCCGTCAGATTGTGCTGATGGAGACGGCGGGGACGCAGCTGGAGTTGCGCTGGCGGATGGCG
GAGACCGAGGGAGTGAAGCG

Downstream 100 bases:

>100_bases
CGACGACGGTGGCCTCAAACTCATCCTCGCCTGCGTGGTAGGCTCCGCCCTCCTCCACGCCGGACTGTTCGCCCTCAAAC
TGCCCGAACCGAAGCCTCCC

Product: transport protein ExbD-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTIKLSDSDGDEGGAGEINMVPLIDVLFSILTFFVLASIFLTRQQGLSLDLPTAKAAKTTQMSEQVTLSVTKEGKFFLNK
ESIDLKSIGPAIKAVVERDPDRLIVIAGDKSVRYKHIVNILDELRQVNATRIAMATDTK

Sequences:

>Translated_139_residues
MTIKLSDSDGDEGGAGEINMVPLIDVLFSILTFFVLASIFLTRQQGLSLDLPTAKAAKTTQMSEQVTLSVTKEGKFFLNK
ESIDLKSIGPAIKAVVERDPDRLIVIAGDKSVRYKHIVNILDELRQVNATRIAMATDTK
>Mature_138_residues
TIKLSDSDGDEGGAGEINMVPLIDVLFSILTFFVLASIFLTRQQGLSLDLPTAKAAKTTQMSEQVTLSVTKEGKFFLNKE
SIDLKSIGPAIKAVVERDPDRLIVIAGDKSVRYKHIVNILDELRQVNATRIAMATDTK

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. [C]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15209; Mature: 15078

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKLSDSDGDEGGAGEINMVPLIDVLFSILTFFVLASIFLTRQQGLSLDLPTAKAAKTT
CEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHH
QMSEQVTLSVTKEGKFFLNKESIDLKSIGPAIKAVVERDPDRLIVIAGDKSVRYKHIVNI
CCCCEEEEEEECCCCEEECCCCCCHHHHCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
LDELRQVNATRIAMATDTK
HHHHHHCCCCEEEEEECCC
>Mature Secondary Structure 
TIKLSDSDGDEGGAGEINMVPLIDVLFSILTFFVLASIFLTRQQGLSLDLPTAKAAKTT
EEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHH
QMSEQVTLSVTKEGKFFLNKESIDLKSIGPAIKAVVERDPDRLIVIAGDKSVRYKHIVNI
CCCCEEEEEEECCCCEEECCCCCCHHHHCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
LDELRQVNATRIAMATDTK
HHHHHHCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]