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The map label for this gene is cpeB [H]

Identifier: 37520759

GI number: 37520759

Start: 1267677

End: 1268210

Strand: Reverse

Name: cpeB [H]

Synonym: gvip160

Alternate gene names: 37520759

Gene position: 1268210-1267677 (Counterclockwise)

Preceding gene: 37520763

Following gene: 37520758

Centisome position: 27.22

GC content: 61.99

Gene sequence:

>534_bases
ATGCTTGATGCTTTCTCGAAAGCCGTAGTCAGCGCCGATCAGAAGACCGGTTACATCGGCGGTGCTGAATTGGCGGCTCT
CAAAACGTACATTGCGAATGGCAATAAGCGTCTCGACGCCGTCAACGCCATCACCAGCAACGCCAGCTGCATCGTCTCCG
ACGCTGTTTCCGGCATGATCTGCGAAAACCCGGGCCTCATCTCGGCCGGCGGCAACTGTTACACCAACCGCCGCATGGCC
GCCTGCCTGCGTGACGGCGAGATCGTCCTGCGCTATGTGACCTACGCGCTTTTGGCCGGCGACGCGTCGGTGCTCGAGGA
CCGCTGCCTCAACGGACTCAAAGAGACCTACATGGCCCTGGGCGTGCCCATTCCTTCGGCCATCCGCGCAGTCAGCATCA
TGAAGGCCTCGGCCGTGGCGTTCATCAACAACACCGCCAGCAAGCGCAAGATCGAAACTCCCCAGGGTGATTGCGCGGCG
CTCGCCTCCGAAGCGGGCAGCTACTTCGACATGGCCGCCTCCGCTCTGCGCTAG

Upstream 100 bases:

>100_bases
ATTGCTTATTTTTTTGCGGGCGAGACCGGCAAATGCCTTGTCCAGTATTGTAGGAACCGACTCAGGTCAACTCTTGTTGT
GTTTTGTTAAGGAGAACGCA

Downstream 100 bases:

>100_bases
GGCCGACGGGCGTTCCAAACGCCTTTTGTCAACCATACTCAGGAGAATCCAGGGCTATGAAGTCCGTAGTTACCACCGTT
CTTGCCGCCGCTGATGCCGC

Product: phycoerythrin beta subunit

Products: NA

Alternate protein names: C-phycoerythrin class I beta chain [H]

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MLDAFSKAVVSADQKTGYIGGAELAALKTYIANGNKRLDAVNAITSNASCIVSDAVSGMICENPGLISAGGNCYTNRRMA
ACLRDGEIVLRYVTYALLAGDASVLEDRCLNGLKETYMALGVPIPSAIRAVSIMKASAVAFINNTASKRKIETPQGDCAA
LASEAGSYFDMAASALR

Sequences:

>Translated_177_residues
MLDAFSKAVVSADQKTGYIGGAELAALKTYIANGNKRLDAVNAITSNASCIVSDAVSGMICENPGLISAGGNCYTNRRMA
ACLRDGEIVLRYVTYALLAGDASVLEDRCLNGLKETYMALGVPIPSAIRAVSIMKASAVAFINNTASKRKIETPQGDCAA
LASEAGSYFDMAASALR
>Mature_177_residues
MLDAFSKAVVSADQKTGYIGGAELAALKTYIANGNKRLDAVNAITSNASCIVSDAVSGMICENPGLISAGGNCYTNRRMA
ACLRDGEIVLRYVTYALLAGDASVLEDRCLNGLKETYMALGVPIPSAIRAVSIMKASAVAFINNTASKRKIETPQGDCAA
LASEAGSYFDMAASALR

Specific function: Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=Forms the periphery of the phycobilisome rod (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phycobiliprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009050
- InterPro:   IPR012128 [H]

Pfam domain/function: PF00502 Phycobilisome [H]

EC number: NA

Molecular weight: Translated: 18427; Mature: 18427

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDAFSKAVVSADQKTGYIGGAELAALKTYIANGNKRLDAVNAITSNASCIVSDAVSGMI
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEHHHHCCEE
CENPGLISAGGNCYTNRRMAACLRDGEIVLRYVTYALLAGDASVLEDRCLNGLKETYMAL
ECCCCEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GVPIPSAIRAVSIMKASAVAFINNTASKRKIETPQGDCAALASEAGSYFDMAASALR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MLDAFSKAVVSADQKTGYIGGAELAALKTYIANGNKRLDAVNAITSNASCIVSDAVSGMI
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEHHHHCCEE
CENPGLISAGGNCYTNRRMAACLRDGEIVLRYVTYALLAGDASVLEDRCLNGLKETYMAL
ECCCCEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GVPIPSAIRAVSIMKASAVAFINNTASKRKIETPQGDCAALASEAGSYFDMAASALR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7512390 [H]