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The map label for this gene is cpeA [H]

Identifier: 37520758

GI number: 37520758

Start: 1267126

End: 1267620

Strand: Reverse

Name: cpeA [H]

Synonym: gvip159

Alternate gene names: 37520758

Gene position: 1267620-1267126 (Counterclockwise)

Preceding gene: 37520759

Following gene: 37520757

Centisome position: 27.21

GC content: 66.46

Gene sequence:

>495_bases
ATGAAGTCCGTAGTTACCACCGTTCTTGCCGCCGCTGATGCCGCCGGCCGTTTTCCCAGCGGCTCCGACCTCGAATCCGT
CCAGGGCAACATCCAGCGCTCCGCCGCGCGCCTTGAAGCCGCCGAGAAGCTCGCCGCCGGCCACGCCGCCGTCGTCAAAG
AAGCGGGCGATGTCGTCTTCAAGAAGTACCCCTACCTCAAGACCGCGGGCGAAGCGGGCGACTCGGCCGAAAAAGTGGCC
AAGTGCTACCGTGACATCGATCACTACATGCGCTTGATCAACTACTGCCTGGTCGTCGGCGGCACCGGCCCCCTCGACGA
GTGGGGCATCTCGGGTGCGCGCGAAGTCTACCGCGCCCTCAACCTGCCCACCGCCGCCTACGTGGCCGCCTTCCAGTACA
CCCGCGACCGCGCCTGCGCGCCGCGCGACATGGGTCCGCAGGCCCTCACCGAGTTCCGGTCCTACCTGGACTATGTGATC
AACGCCCTGTCGTAG

Upstream 100 bases:

>100_bases
AAGCGGGCAGCTACTTCGACATGGCCGCCTCCGCTCTGCGCTAGGGCCGACGGGCGTTCCAAACGCCTTTTGTCAACCAT
ACTCAGGAGAATCCAGGGCT

Downstream 100 bases:

>100_bases
GTTGCGCTTCGGTGTCCCACCGAACGCCATAGTCGAAAAATCCCTGGTGTGCGTGCGGCGGCACTTTTGCGAGTGCCCCT
GCCCACCGGGGTTTTTCGGC

Product: phycoerythrin alpha chain

Products: NA

Alternate protein names: C-phycoerythrin class I alpha chain [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKSVVTTVLAAADAAGRFPSGSDLESVQGNIQRSAARLEAAEKLAAGHAAVVKEAGDVVFKKYPYLKTAGEAGDSAEKVA
KCYRDIDHYMRLINYCLVVGGTGPLDEWGISGAREVYRALNLPTAAYVAAFQYTRDRACAPRDMGPQALTEFRSYLDYVI
NALS

Sequences:

>Translated_164_residues
MKSVVTTVLAAADAAGRFPSGSDLESVQGNIQRSAARLEAAEKLAAGHAAVVKEAGDVVFKKYPYLKTAGEAGDSAEKVA
KCYRDIDHYMRLINYCLVVGGTGPLDEWGISGAREVYRALNLPTAAYVAAFQYTRDRACAPRDMGPQALTEFRSYLDYVI
NALS
>Mature_164_residues
MKSVVTTVLAAADAAGRFPSGSDLESVQGNIQRSAARLEAAEKLAAGHAAVVKEAGDVVFKKYPYLKTAGEAGDSAEKVA
KCYRDIDHYMRLINYCLVVGGTGPLDEWGISGAREVYRALNLPTAAYVAAFQYTRDRACAPRDMGPQALTEFRSYLDYVI
NALS

Specific function: Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=Forms the periphery of the phycobilisome rod (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phycobiliprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009050
- InterPro:   IPR012128 [H]

Pfam domain/function: PF00502 Phycobilisome [H]

EC number: NA

Molecular weight: Translated: 17658; Mature: 17658

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVVTTVLAAADAAGRFPSGSDLESVQGNIQRSAARLEAAEKLAAGHAAVVKEAGDVVF
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKYPYLKTAGEAGDSAEKVAKCYRDIDHYMRLINYCLVVGGTGPLDEWGISGAREVYRAL
HHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHH
NLPTAAYVAAFQYTRDRACAPRDMGPQALTEFRSYLDYVINALS
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSVVTTVLAAADAAGRFPSGSDLESVQGNIQRSAARLEAAEKLAAGHAAVVKEAGDVVF
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKYPYLKTAGEAGDSAEKVAKCYRDIDHYMRLINYCLVVGGTGPLDEWGISGAREVYRAL
HHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHH
NLPTAAYVAAFQYTRDRACAPRDMGPQALTEFRSYLDYVINALS
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7512390 [H]