| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37520763
Identifier: 37520763
GI number: 37520763
Start: 1270574
End: 1271059
Strand: Reverse
Name: 37520763
Synonym: gll1194
Alternate gene names: NA
Gene position: 1271059-1270574 (Counterclockwise)
Preceding gene: 37520764
Following gene: 37520759
Centisome position: 27.28
GC content: 58.02
Gene sequence:
>486_bases ATGGCAACTTCGGACCACTTGCTTTTCGCTTTGAAGCTTTTTTCGGCACTGGGTTGCGGGCTGATAGCTGGAGTCTTCTT CGCCTTCTCGGCCTTTGTGATGGACGCCCTTGCCAGGCTGCGGCCGGCGCAAGGTATTGCCGCCATGCAATCGATCAATA TCACGGTGATCAATCCATTGTTTATCACGGCATTCTTTGGCACGGCCGCAGCTTGCATGCTTCTAGCTGTCTTTTCGCTG TCGGGCTGGCATCAACCCGGTGCCGCCTACGTGCTCACTGGCAGTCTGCTCTATCTGGTGGGCACATTTCTGGTGACCAT CGTGTTTAATGTGCCGCTGAACGAAGCGTTGGCGGCTGTCGAGCCGGGCAGCACCGGGGGCGAGAGCCTGTGGACCAGAT ACCTTGCCAACTGGACGCTCTGGAACCACATTCGGACGGCGGCGGCGCTTGCAGCAGCGGCATCGCTTACCATCGCGCTT TGTTAG
Upstream 100 bases:
>100_bases TACTGGGTAGCCGGAGGCGCAGGGTCTGGTCGCTCAAATTGTGTGCAAATGTCTACTGATTCAACACTTCTGTTTTGGGC AGTAATCCGCAGGAGGAAAT
Downstream 100 bases:
>100_bases CGGGTGACACCCGAGGATGAATCGCTCAACTCCGTTGCCGGCCAGTGCGGTACCAGTGTGGCTGGCCCACAGCAGGCAGG CGCGCTCTCAAAAATGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral-Membrane Protein; Integral Membrane Protein-Like Protein
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MATSDHLLFALKLFSALGCGLIAGVFFAFSAFVMDALARLRPAQGIAAMQSINITVINPLFITAFFGTAAACMLLAVFSL SGWHQPGAAYVLTGSLLYLVGTFLVTIVFNVPLNEALAAVEPGSTGGESLWTRYLANWTLWNHIRTAAALAAAASLTIAL C
Sequences:
>Translated_161_residues MATSDHLLFALKLFSALGCGLIAGVFFAFSAFVMDALARLRPAQGIAAMQSINITVINPLFITAFFGTAAACMLLAVFSL SGWHQPGAAYVLTGSLLYLVGTFLVTIVFNVPLNEALAAVEPGSTGGESLWTRYLANWTLWNHIRTAAALAAAASLTIAL C >Mature_160_residues ATSDHLLFALKLFSALGCGLIAGVFFAFSAFVMDALARLRPAQGIAAMQSINITVINPLFITAFFGTAAACMLLAVFSLS GWHQPGAAYVLTGSLLYLVGTFLVTIVFNVPLNEALAAVEPGSTGGESLWTRYLANWTLWNHIRTAAALAAAASLTIALC
Specific function: Unknown
COG id: COG5500
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16929; Mature: 16798
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSDHLLFALKLFSALGCGLIAGVFFAFSAFVMDALARLRPAQGIAAMQSINITVINPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEHHH FITAFFGTAAACMLLAVFSLSGWHQPGAAYVLTGSLLYLVGTFLVTIVFNVPLNEALAAV HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC EPGSTGGESLWTRYLANWTLWNHIRTAAALAAAASLTIALC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC >Mature Secondary Structure ATSDHLLFALKLFSALGCGLIAGVFFAFSAFVMDALARLRPAQGIAAMQSINITVINPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEHHH FITAFFGTAAACMLLAVFSLSGWHQPGAAYVLTGSLLYLVGTFLVTIVFNVPLNEALAAV HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC EPGSTGGESLWTRYLANWTLWNHIRTAAALAAAASLTIALC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA