Click here to switch to the map view.

The map label for this gene is cpeY

Identifier: 37520757

GI number: 37520757

Start: 1265706

End: 1266992

Strand: Reverse

Name: cpeY

Synonym: gvip158

Alternate gene names: NA

Gene position: 1266992-1265706 (Counterclockwise)

Preceding gene: 37520758

Following gene: 37520756

Centisome position: 27.19

GC content: 63.48

Gene sequence:

>1287_bases
ATGGAAAACCGCTTTTTGAACATTTTTCCCGGCCTCAGCGAGGAACGGGCAATCGAACTGTTGTACACGCCGATGGCCCA
GCTTGAGGATGCCTCCGAGCGCTATATCGCCGCTGCCCACCTGGTCAATTTCCCGAGCGAGCGGGCCATCGACGCGCTTC
TCGCCGCGGTCGAAAACCGCGATTCGGCCCTCGACAACCGCATCGTGCGCCGCAAAGCGGTAGAAACGCTCGGGCGGCTC
AAAGTCGAGCGCGCCCTGCCGGTGATTCGCGCCTCTCTGCAGGACGAGGACAACTATCTGGTCGAAAACGCCGCCTGGGC
GATCGGCGAAATCGGTTGCAGCGACCCGGAGATTCTCGAAGAACTGACCGCACTGCTTGCCAGACCCCGCCAGAGCTACC
GCACGATCATCCAGACGCTTGCCAAGCTGGGCTACACCCCCGCCACCGGGCGCATCGCCGCTTTCGAGCAATCGCCTGAG
CCACCAATTGCCAGTGCCGCCATCACCGCCGTGGGCCGTCTGAGCGGCGAGCGGGCGGGGCTGGAGCGACTGCTGCCGTT
TTTGCAGCACCCGAATGTCAATGCCCGGCGGGGCGTCATTCAGGATCTGATGGATAGCGAATACTTCGAAGCCATCCCCC
GCATCGCCGCCTGCCCGGTCTCGGCCGTATTTCGGTTGCGCGGCATCCGGCACCTGGCCGATGCCGGGGTGCCGATCGGA
GCGGTCTCCTTTCAGCAGGTGGAATCCGGCCTCGACCGGGTGATCGTCGATCATCCCCGCTTCCTGGAGCCGGTGCACCG
CTACGAGCGCACCCCCCACCTGGAGGAACTGATCGAAGAACTGTACAGTACCGACTTCGGCCGCTGCTATCTGGCCACCC
AGACGATCATCGATCACTACCCCGACGCCGGTCCCGCCCTGGTCGCTTCTTTTGAAGCCGCAGGCCACAACGACTACGGC
GCCCATTACCACATCGTCAAACTGTTGGGCTGGCTGCGCTTCGGTGAGGCGCGGGAAATTGTCGTCGGGGCTTTGCACGA
CCGCCGGCCGCAATTTATGAAATCTCGCTCCGCCGCCGCCATCGCCCTGGCCGAGTTGGGAGATACCCGGGTGCCGGCGG
ATTTGCGCTCGTGCCTGGATTCGTTTATCTGGGAACTCAAGTACGCCTGCCTGATTGCCCTCGAACACCTCGAAGATCCC
ACGGGGGCACAAATCGCTCTGCAGGACAGCGATTGGGTCGTGCGCGCCAAAGCCGAGCGCCAGTGTACTGCCCCCCTTGC
CCACTAA

Upstream 100 bases:

>100_bases
CGAAAAATCCCTGGTGTGCGTGCGGCGGCACTTTTGCGAGTGCCCCTGCCCACCGGGGTTTTTCGGCGATTATGAATGCT
TCACCCCGGATTGGGCAACT

Downstream 100 bases:

>100_bases
GTATTTTCACCGACCATCTAAACGCGATGTCTCTCGAAGAAACTTATCCGCAGCTCAAACACAAAAATCCCCGCCTGCGC
GAGCGGGCCATGCACCAGGT

Product: putative phycoerythrin lyase subunit

Products: NA

Alternate protein names: ORF Y [H]

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MENRFLNIFPGLSEERAIELLYTPMAQLEDASERYIAAAHLVNFPSERAIDALLAAVENRDSALDNRIVRRKAVETLGRL
KVERALPVIRASLQDEDNYLVENAAWAIGEIGCSDPEILEELTALLARPRQSYRTIIQTLAKLGYTPATGRIAAFEQSPE
PPIASAAITAVGRLSGERAGLERLLPFLQHPNVNARRGVIQDLMDSEYFEAIPRIAACPVSAVFRLRGIRHLADAGVPIG
AVSFQQVESGLDRVIVDHPRFLEPVHRYERTPHLEELIEELYSTDFGRCYLATQTIIDHYPDAGPALVASFEAAGHNDYG
AHYHIVKLLGWLRFGEAREIVVGALHDRRPQFMKSRSAAAIALAELGDTRVPADLRSCLDSFIWELKYACLIALEHLEDP
TGAQIALQDSDWVVRAKAERQCTAPLAH

Sequences:

>Translated_428_residues
MENRFLNIFPGLSEERAIELLYTPMAQLEDASERYIAAAHLVNFPSERAIDALLAAVENRDSALDNRIVRRKAVETLGRL
KVERALPVIRASLQDEDNYLVENAAWAIGEIGCSDPEILEELTALLARPRQSYRTIIQTLAKLGYTPATGRIAAFEQSPE
PPIASAAITAVGRLSGERAGLERLLPFLQHPNVNARRGVIQDLMDSEYFEAIPRIAACPVSAVFRLRGIRHLADAGVPIG
AVSFQQVESGLDRVIVDHPRFLEPVHRYERTPHLEELIEELYSTDFGRCYLATQTIIDHYPDAGPALVASFEAAGHNDYG
AHYHIVKLLGWLRFGEAREIVVGALHDRRPQFMKSRSAAAIALAELGDTRVPADLRSCLDSFIWELKYACLIALEHLEDP
TGAQIALQDSDWVVRAKAERQCTAPLAH
>Mature_428_residues
MENRFLNIFPGLSEERAIELLYTPMAQLEDASERYIAAAHLVNFPSERAIDALLAAVENRDSALDNRIVRRKAVETLGRL
KVERALPVIRASLQDEDNYLVENAAWAIGEIGCSDPEILEELTALLARPRQSYRTIIQTLAKLGYTPATGRIAAFEQSPE
PPIASAAITAVGRLSGERAGLERLLPFLQHPNVNARRGVIQDLMDSEYFEAIPRIAACPVSAVFRLRGIRHLADAGVPIG
AVSFQQVESGLDRVIVDHPRFLEPVHRYERTPHLEELIEELYSTDFGRCYLATQTIIDHYPDAGPALVASFEAAGHNDYG
AHYHIVKLLGWLRFGEAREIVVGALHDRRPQFMKSRSAAAIALAELGDTRVPADLRSCLDSFIWELKYACLIALEHLEDP
TGAQIALQDSDWVVRAKAERQCTAPLAH

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR004155 [H]

Pfam domain/function: PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 47550; Mature: 47550

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRFLNIFPGLSEERAIELLYTPMAQLEDASERYIAAAHLVNFPSERAIDALLAAVENR
CCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
DSALDNRIVRRKAVETLGRLKVERALPVIRASLQDEDNYLVENAAWAIGEIGCSDPEILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCHHHHH
ELTALLARPRQSYRTIIQTLAKLGYTPATGRIAAFEQSPEPPIASAAITAVGRLSGERAG
HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHCC
LERLLPFLQHPNVNARRGVIQDLMDSEYFEAIPRIAACPVSAVFRLRGIRHLADAGVPIG
HHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC
AVSFQQVESGLDRVIVDHPRFLEPVHRYERTPHLEELIEELYSTDFGRCYLATQTIIDHY
HHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHC
PDAGPALVASFEAAGHNDYGAHYHIVKLLGWLRFGEAREIVVGALHDRRPQFMKSRSAAA
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCHHH
IALAELGDTRVPADLRSCLDSFIWELKYACLIALEHLEDPTGAQIALQDSDWVVRAKAER
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCC
QCTAPLAH
CCCCCCCC
>Mature Secondary Structure
MENRFLNIFPGLSEERAIELLYTPMAQLEDASERYIAAAHLVNFPSERAIDALLAAVENR
CCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
DSALDNRIVRRKAVETLGRLKVERALPVIRASLQDEDNYLVENAAWAIGEIGCSDPEILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCHHHHH
ELTALLARPRQSYRTIIQTLAKLGYTPATGRIAAFEQSPEPPIASAAITAVGRLSGERAG
HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHCC
LERLLPFLQHPNVNARRGVIQDLMDSEYFEAIPRIAACPVSAVFRLRGIRHLADAGVPIG
HHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC
AVSFQQVESGLDRVIVDHPRFLEPVHRYERTPHLEELIEELYSTDFGRCYLATQTIIDHY
HHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHC
PDAGPALVASFEAAGHNDYGAHYHIVKLLGWLRFGEAREIVVGALHDRRPQFMKSRSAAA
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCHHH
IALAELGDTRVPADLRSCLDSFIWELKYACLIALEHLEDPTGAQIALQDSDWVVRAKAER
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCC
QCTAPLAH
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1809846 [H]