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The map label for this gene is psbL

Identifier: 37520427

GI number: 37520427

Start: 906143

End: 906256

Strand: Direct

Name: psbL

Synonym: gvip111

Alternate gene names: 37520427

Gene position: 906143-906256 (Clockwise)

Preceding gene: 37520426

Following gene: 37520428

Centisome position: 19.45

GC content: 50.88

Gene sequence:

>114_bases
GTGTCCAAAGATCCGAAAAATCCTGGCGTCGAGCTGAACCGCACTTCCCTGTACATGGGCCTGGTGCTGGTGCTCGTGAT
CATCTTGCTGTTCTCCAACTACTTCATCAACTAA

Upstream 100 bases:

>100_bases
CCGCTGGCTGGCGGTCCACGCCCTGACCGTGCCCACGATCTTCTTCCTGGGCGCTCTGGCCGCGATGCAGTTTATCCAGC
GCTAAGACGGAGAAAATCTC

Downstream 100 bases:

>100_bases
TCGGAGCGCGACGATGCCGCAAAGAATTCCCCTGTGGATGGTGGGTGTGATGGCCGGTCTGGGCGTGATTGCGATCCTGG
GGCTGTTCTTCTACGGTTCC

Product: photosystem II protein L

Products: NA

Alternate protein names: PSII-L; PSII 5 kDa protein

Number of amino acids: Translated: 37; Mature: 36

Protein sequence:

>37_residues
MSKDPKNPGVELNRTSLYMGLVLVLVIILLFSNYFIN

Sequences:

>Translated_37_residues
MSKDPKNPGVELNRTSLYMGLVLVLVIILLFSNYFIN
>Mature_36_residues
SKDPKNPGVELNRTSLYMGLVLVLVIILLFSNYFIN

Specific function: Required for PSII activity

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbL family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBL_GLOVI (Q7NMA8)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_923804.1
- ProteinModelPortal:   Q7NMA8
- SMR:   Q7NMA8
- GeneID:   2599284
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.858
- HOGENOM:   HBG711098
- BioCyc:   GVIO251221:GSR0858-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_01317
- InterPro:   IPR003372
- ProDom:   PD005113

Pfam domain/function: PF02419 PsbL

EC number: NA

Molecular weight: Translated: 4213; Mature: 4082

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x124e04b0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDPKNPGVELNRTSLYMGLVLVLVIILLFSNYFIN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
SKDPKNPGVELNRTSLYMGLVLVLVIILLFSNYFIN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292