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The map label for this gene is psbE

Identifier: 37520425

GI number: 37520425

Start: 905698

End: 905952

Strand: Direct

Name: psbE

Synonym: gvip109

Alternate gene names: 37520425

Gene position: 905698-905952 (Clockwise)

Preceding gene: 37520424

Following gene: 37520426

Centisome position: 19.44

GC content: 53.73

Gene sequence:

>255_bases
ATGTCGAGCCGCAGCACTGGCGAGCGCCCTTTCACCGATATCATCACCAGTACGCGCTACTGGATCATTCACATTCCCGC
TATAACCATTTTGTTTGCGAGTGGTTTTCTATTCGTTTACACGGGGCTCGCCTACGACGTGTTCGGCACTCCCCGCCCCG
ACGAATACTACAACTCCGACAACACCAAAAAGCCGCTGGTGAACAAGCGCTTCGAGGCGAAGCAGCAGCTGGACGAAGCC
ACCAAGAACAAATAA

Upstream 100 bases:

>100_bases
TCAAATACCGGGGGGCCGCAGATTAAATTCTTGTTGTCTCGTGTAATGTTCCGTATCATTGTGTAAAATTGCAGTCAAGA
GTCCTGGGAGGCCTTATCTT

Downstream 100 bases:

>100_bases
TTTTGCAGGAAGCACTGTCATGACCACTTCTTCGAACCGTCCCACCCCCGGTGGCCCGACCCAGCCCGTCTCCTACCCGG
TCTTCACCGTCCGCTGGCTG

Product: cytochrome b559 subunit alpha

Products: NA

Alternate protein names: PSII reaction center subunit V

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MSSRSTGERPFTDIITSTRYWIIHIPAITILFASGFLFVYTGLAYDVFGTPRPDEYYNSDNTKKPLVNKRFEAKQQLDEA
TKNK

Sequences:

>Translated_84_residues
MSSRSTGERPFTDIITSTRYWIIHIPAITILFASGFLFVYTGLAYDVFGTPRPDEYYNSDNTKKPLVNKRFEAKQQLDEA
TKNK
>Mature_83_residues
SSRSTGERPFTDIITSTRYWIIHIPAITILFASGFLFVYTGLAYDVFGTPRPDEYYNSDNTKKPLVNKRFEAKQQLDEAT
KNK

Specific function: This b-type cytochrome is tightly associated with the reaction center of photosystem II and possibly is part of the water-oxidation complex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbE/psbF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBE_GLOVI (Q7NMB0)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_923802.1
- ProteinModelPortal:   Q7NMB0
- SMR:   Q7NMB0
- GeneID:   2599282
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.856
- HOGENOM:   HBG284226
- OMA:   TPRPNEY
- ProtClustDB:   PRK02557
- BioCyc:   GVIO251221:GSR0856-MONOMER
- GO:   GO:0009536
- GO:   GO:0006810
- HAMAP:   MF_00642
- InterPro:   IPR006217
- InterPro:   IPR013081
- InterPro:   IPR013082
- PIRSF:   PIRSF000036
- TIGRFAMs:   TIGR01332

Pfam domain/function: PF00283 Cytochrom_B559; PF00284 Cytochrom_B559a

EC number: NA

Molecular weight: Translated: 9683; Mature: 9552

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS00537 CYTOCHROME_B559

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10909420)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRSTGERPFTDIITSTRYWIIHIPAITILFASGFLFVYTGLAYDVFGTPRPDEYYNSD
CCCCCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
NTKKPLVNKRFEAKQQLDEATKNK
CCCCCCHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
SSRSTGERPFTDIITSTRYWIIHIPAITILFASGFLFVYTGLAYDVFGTPRPDEYYNSD
CCCCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
NTKKPLVNKRFEAKQQLDEATKNK
CCCCCCHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292