Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37520112

Identifier: 37520112

GI number: 37520112

Start: 579079

End: 579474

Strand: Direct

Name: 37520112

Synonym: glr0543

Alternate gene names: NA

Gene position: 579079-579474 (Clockwise)

Preceding gene: 37520109

Following gene: 37520116

Centisome position: 12.43

GC content: 55.56

Gene sequence:

>396_bases
ATGACTAACGGCCCGGTCCGGCCCCGCCTCGAATTTCCGACTGCTCTACTCACACTCGCCACACCAATTCTGACTTTTGT
ACTGTTCTTTGCGCTGTCTTTTTCGGTCGCCAACGATCTGGGCCGGGCGTTTCTGGCTCTCCTGGTCGCGTTCATCATCA
TTTTGCTGGTGGGCTTTCTGGTGCCGGCCGTCTACCGCCGTATCAACCGCGGCAGCCTGCTGGTCCACACGAGCGCCTCG
TTTTTCTTTGGCCTGGTCAGTGCCCTGTTTTTGACCCTGGGCAACTTGAGCCCCTGGATTATCTGCTGGATCGTGCTTTG
TTTGTTTTGGGCTTATCTGCCCAACCCGAGCTTCCACCGCAGCCTGGAAGAAAATTTTGGCGATCTGTTCAACTAA

Upstream 100 bases:

>100_bases
GCGCGTTCCCGAGTCGTAGGCGGCATCGCCCGCTCGGGAAAGGGCCTCACCCCGCCGAGACACTTTTATGGTTGATGTCT
AGTTTTTGAGGAGTACTGCC

Downstream 100 bases:

>100_bases
GGCTCACTTGCGGCGCTTGAGCCGTTCGAGTTCCTGCTCCAGTTCCCAATCGCGAAAGCGCGCATCGAGGTCGTCGGAGC
CTTCAAAGCCCATACTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTNGPVRPRLEFPTALLTLATPILTFVLFFALSFSVANDLGRAFLALLVAFIIILLVGFLVPAVYRRINRGSLLVHTSAS
FFFGLVSALFLTLGNLSPWIICWIVLCLFWAYLPNPSFHRSLEENFGDLFN

Sequences:

>Translated_131_residues
MTNGPVRPRLEFPTALLTLATPILTFVLFFALSFSVANDLGRAFLALLVAFIIILLVGFLVPAVYRRINRGSLLVHTSAS
FFFGLVSALFLTLGNLSPWIICWIVLCLFWAYLPNPSFHRSLEENFGDLFN
>Mature_130_residues
TNGPVRPRLEFPTALLTLATPILTFVLFFALSFSVANDLGRAFLALLVAFIIILLVGFLVPAVYRRINRGSLLVHTSASF
FFGLVSALFLTLGNLSPWIICWIVLCLFWAYLPNPSFHRSLEENFGDLFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14668; Mature: 14536

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNGPVRPRLEFPTALLTLATPILTFVLFFALSFSVANDLGRAFLALLVAFIIILLVGFL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPAVYRRINRGSLLVHTSASFFFGLVSALFLTLGNLSPWIICWIVLCLFWAYLPNPSFHR
HHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH
SLEENFGDLFN
HHHHHHHHCCC
>Mature Secondary Structure 
TNGPVRPRLEFPTALLTLATPILTFVLFFALSFSVANDLGRAFLALLVAFIIILLVGFL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPAVYRRINRGSLLVHTSASFFFGLVSALFLTLGNLSPWIICWIVLCLFWAYLPNPSFHR
HHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH
SLEENFGDLFN
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA