| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ftsI [H]
Identifier: 34499804
GI number: 34499804
Start: 4690212
End: 4691963
Strand: Reverse
Name: ftsI [H]
Synonym: CV_4349
Alternate gene names: 34499804
Gene position: 4691963-4690212 (Counterclockwise)
Preceding gene: 34499805
Following gene: 34499803
Centisome position: 98.76
GC content: 68.04
Gene sequence:
>1752_bases ATGCGCGCCGGTTCCAGCTACAGCGTCCGCACCCGCCCCGCGCCGGCCAGCCCCGCGCTGCGGATGACCAGCACGCGCGT GCGCTGCGTGCTGCTGATGCTGGCGCTGCTGTTCCTGGCGCTGATCGGCCGCGCGGTCTATCTGCAGGTGGTGCAGCAGG ACTTCTTGCAGAACCAGGGTGAGGCGCGTTTCCGCCGCACCCTGACGCTGGAGGCCAACCGCGGCGTGATCACCGACCGC AACGGCGAGCCGCTGGCGATCAGCTCGCCGGTGCAGACCATCTGGGCCAGTCCGGCCGACATGGAGCCGGTGCCGCCGGC CAAGCTGCGAGAGCTGGCCGGCCTGCTGGACCTGTCGCCGGAGGAGCTGTCGGCCAAGTTGTCTGACCGCAAGAAGGAAT TCGTCTACATCAAGCGCCAGATCAGCCCGGAGCTGGCGGACAAGGTGATGGCGCTGGGCGTGCCCGGCATCGCCAAGCAG CAGGAGTTCCGCCGCTTCTACCCGGCCGGCGAGATCGTGTCGCACATCATCGGTTTCACCGGGGTGGACGGCAAGGGCCA GGAGGGCGTGGAGCTCGCCCGCGAGAAGATGCTGTCCGGCAAGGATGGCCGCCGCGTGGTGCTGAAGGATCGCCGCGGCC ACATCATCGAGGACGTCGCCGCCATCGAGCCGCCGCGCGACGGCCAGAAGCTGGCGCTGGCGATCGACCACCGCATCCAG TACCTGGCCTACCGCGAAATCAAGGCCGCGGTGGAGACCAACAAGGCCAAGGCCGGCAGCGTGGTGGTGCTGGACGCCCA CACCGGCGAACTGCTGGCGCTGGCCAACTACCCGTCGTTCAACCCGAACAACCGCAGCGGCGTGACGCCGGAAATGATGC GCAACCGCGGCGTGATCGACCTGTTCGAGCCCGGCTCGACGATGAAGCCGCTGTCGATCTCGCTGGCGCTGGAGCACGGC AAGGCCAATCTGAACACGGTGCTGGACACCCACAGCTACATGATAGGCCCGGCCACCATCCGCGACGTGTCGCCGCAGGC CAGCCTGGGCATCCTGGGCATCATCCAGAAATCGTCCAACGTCGGCACCAGCAAGCTGGCGCTGCTGAACAGCCCGGAAG AGTTCTGGAAGCACTACGACGCGCTGGGCTTCGGCCGGGCGCCGGAAACCGGCTTCCCCGGCGAGGCCAGCGGCCGGCTG CGCGACTGGCACAAGTGGCGCCCGATCGAGCAGGCGACGATGTCCTTCGGCTACGGCGTGTCGGTCAGCCTGATCCAGAT GGCGCGCGCCTACACCATTTTCGCCAACGACGGCGTGATGCTGCCGGTGGCGCTGTACAAGACTGCCAACCCGATGCCGG GCAAGCGGGTGCTCAGCGAGAAGACCGCGCACGAGATGCGCGATCTGCTGATCGCCAACAGCCAGCCTGGCGGCGGCGCC GTCGGCGGCCGCATCATCGGCTACAGCATAGGCGGCAAGAGCGGCACCGCGCGCAAGCTGGAGGGCCGCGCCTACGTGGC CAACAAGCACCGCGCGCTGTTCATGGGCTTCGCGCCCGGCCACTCGCCCAAGGTGATCGTGGCGGTGATGATAGACGAGC CGTCCGCGGGCAAATACTACGGCGGCGCGGTGTCCGCGCCGGTGTTCTCTCAGGTGGCGGGCGGCGCGCTGCGCGTGCTG AACATCGCGCCGGACGAGCCATCCAACAACACTTTATTGCCGGAATCGACCCCGGTTCCGGCGGATTTCTAA
Upstream 100 bases:
>100_bases GCGCGCACGCGGTGATAGAAAAGGCCGCGTCCACCCGTCTCGACATGCACACCCCCGATCCGCGCCAGATCCAGGTGATC ACGGCCAAGGGAGCGCTGTG
Downstream 100 bases:
>100_bases GATCATGAAGAGCCGTTTGACTGCGTTGCCGGACTGGGATCCGGCCTTGTTGCAACAGCTGGGCCTCCCGATCAAGCGGG TGGAGGCCGACAGCCGCCGC
Product: penicillin-binding protein 3
Products: [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)]n+1-; $diphosphoundecaprenol; undecaprenyl diphosphate
Alternate protein names: PBP-2 [H]
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MRAGSSYSVRTRPAPASPALRMTSTRVRCVLLMLALLFLALIGRAVYLQVVQQDFLQNQGEARFRRTLTLEANRGVITDR NGEPLAISSPVQTIWASPADMEPVPPAKLRELAGLLDLSPEELSAKLSDRKKEFVYIKRQISPELADKVMALGVPGIAKQ QEFRRFYPAGEIVSHIIGFTGVDGKGQEGVELAREKMLSGKDGRRVVLKDRRGHIIEDVAAIEPPRDGQKLALAIDHRIQ YLAYREIKAAVETNKAKAGSVVVLDAHTGELLALANYPSFNPNNRSGVTPEMMRNRGVIDLFEPGSTMKPLSISLALEHG KANLNTVLDTHSYMIGPATIRDVSPQASLGILGIIQKSSNVGTSKLALLNSPEEFWKHYDALGFGRAPETGFPGEASGRL RDWHKWRPIEQATMSFGYGVSVSLIQMARAYTIFANDGVMLPVALYKTANPMPGKRVLSEKTAHEMRDLLIANSQPGGGA VGGRIIGYSIGGKSGTARKLEGRAYVANKHRALFMGFAPGHSPKVIVAVMIDEPSAGKYYGGAVSAPVFSQVAGGALRVL NIAPDEPSNNTLLPESTPVPADF
Sequences:
>Translated_583_residues MRAGSSYSVRTRPAPASPALRMTSTRVRCVLLMLALLFLALIGRAVYLQVVQQDFLQNQGEARFRRTLTLEANRGVITDR NGEPLAISSPVQTIWASPADMEPVPPAKLRELAGLLDLSPEELSAKLSDRKKEFVYIKRQISPELADKVMALGVPGIAKQ QEFRRFYPAGEIVSHIIGFTGVDGKGQEGVELAREKMLSGKDGRRVVLKDRRGHIIEDVAAIEPPRDGQKLALAIDHRIQ YLAYREIKAAVETNKAKAGSVVVLDAHTGELLALANYPSFNPNNRSGVTPEMMRNRGVIDLFEPGSTMKPLSISLALEHG KANLNTVLDTHSYMIGPATIRDVSPQASLGILGIIQKSSNVGTSKLALLNSPEEFWKHYDALGFGRAPETGFPGEASGRL RDWHKWRPIEQATMSFGYGVSVSLIQMARAYTIFANDGVMLPVALYKTANPMPGKRVLSEKTAHEMRDLLIANSQPGGGA VGGRIIGYSIGGKSGTARKLEGRAYVANKHRALFMGFAPGHSPKVIVAVMIDEPSAGKYYGGAVSAPVFSQVAGGALRVL NIAPDEPSNNTLLPESTPVPADF >Mature_583_residues MRAGSSYSVRTRPAPASPALRMTSTRVRCVLLMLALLFLALIGRAVYLQVVQQDFLQNQGEARFRRTLTLEANRGVITDR NGEPLAISSPVQTIWASPADMEPVPPAKLRELAGLLDLSPEELSAKLSDRKKEFVYIKRQISPELADKVMALGVPGIAKQ QEFRRFYPAGEIVSHIIGFTGVDGKGQEGVELAREKMLSGKDGRRVVLKDRRGHIIEDVAAIEPPRDGQKLALAIDHRIQ YLAYREIKAAVETNKAKAGSVVVLDAHTGELLALANYPSFNPNNRSGVTPEMMRNRGVIDLFEPGSTMKPLSISLALEHG KANLNTVLDTHSYMIGPATIRDVSPQASLGILGIIQKSSNVGTSKLALLNSPEEFWKHYDALGFGRAPETGFPGEASGRL RDWHKWRPIEQATMSFGYGVSVSLIQMARAYTIFANDGVMLPVALYKTANPMPGKRVLSEKTAHEMRDLLIANSQPGGGA VGGRIIGYSIGGKSGTARKLEGRAYVANKHRALFMGFAPGHSPKVIVAVMIDEPSAGKYYGGAVSAPVFSQVAGGALRVL NIAPDEPSNNTLLPESTPVPADF
Specific function: Synthesis of cross-linked peptidoglycan from the lipid intermediates [H]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786272, Length=542, Percent_Identity=43.7269372693727, Blast_Score=458, Evalue=1e-130, Organism=Escherichia coli, GI1786854, Length=636, Percent_Identity=25.6289308176101, Blast_Score=124, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005311 - InterPro: IPR001460 [H]
Pfam domain/function: PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: 2.4.1.129
Molecular weight: Translated: 63103; Mature: 63103
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGSSYSVRTRPAPASPALRMTSTRVRCVLLMLALLFLALIGRAVYLQVVQQDFLQNQG CCCCCCCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EARFRRTLTLEANRGVITDRNGEPLAISSPVQTIWASPADMEPVPPAKLRELAGLLDLSP CCEEEEEEEEECCCCEEECCCCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCH EELSAKLSDRKKEFVYIKRQISPELADKVMALGVPGIAKQQEFRRFYPAGEIVSHIIGFT HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCC GVDGKGQEGVELAREKMLSGKDGRRVVLKDRRGHIIEDVAAIEPPRDGQKLALAIDHRIQ CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEEEHHHHH YLAYREIKAAVETNKAKAGSVVVLDAHTGELLALANYPSFNPNNRSGVTPEMMRNRGVID HHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCEE LFEPGSTMKPLSISLALEHGKANLNTVLDTHSYMIGPATIRDVSPQASLGILGIIQKSSN EECCCCCCCCEEEEEEEECCCCCCHHEEECCCEEECCHHEECCCCCCCCCEEEEEECCCC VGTSKLALLNSPEEFWKHYDALGFGRAPETGFPGEASGRLRDWHKWRPIEQATMSFGYGV CCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCC SVSLIQMARAYTIFANDGVMLPVALYKTANPMPGKRVLSEKTAHEMRDLLIANSQPGGGA HHHHHHHHHEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCC VGGRIIGYSIGGKSGTARKLEGRAYVANKHRALFMGFAPGHSPKVIVAVMIDEPSAGKYY CCCEEEEEEECCCCCCCEEECCCEEEECCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC GGAVSAPVFSQVAGGALRVLNIAPDEPSNNTLLPESTPVPADF CCCCCCHHHHHHCCCEEEEEEECCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure MRAGSSYSVRTRPAPASPALRMTSTRVRCVLLMLALLFLALIGRAVYLQVVQQDFLQNQG CCCCCCCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EARFRRTLTLEANRGVITDRNGEPLAISSPVQTIWASPADMEPVPPAKLRELAGLLDLSP CCEEEEEEEEECCCCEEECCCCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCH EELSAKLSDRKKEFVYIKRQISPELADKVMALGVPGIAKQQEFRRFYPAGEIVSHIIGFT HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCC GVDGKGQEGVELAREKMLSGKDGRRVVLKDRRGHIIEDVAAIEPPRDGQKLALAIDHRIQ CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEEEHHHHH YLAYREIKAAVETNKAKAGSVVVLDAHTGELLALANYPSFNPNNRSGVTPEMMRNRGVID HHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCEE LFEPGSTMKPLSISLALEHGKANLNTVLDTHSYMIGPATIRDVSPQASLGILGIIQKSSN EECCCCCCCCEEEEEEEECCCCCCHHEEECCCEEECCHHEECCCCCCCCCEEEEEECCCC VGTSKLALLNSPEEFWKHYDALGFGRAPETGFPGEASGRLRDWHKWRPIEQATMSFGYGV CCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCC SVSLIQMARAYTIFANDGVMLPVALYKTANPMPGKRVLSEKTAHEMRDLLIANSQPGGGA HHHHHHHHHEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCC VGGRIIGYSIGGKSGTARKLEGRAYVANKHRALFMGFAPGHSPKVIVAVMIDEPSAGKYY CCCEEEEEEECCCCCCCEEECCCEEEECCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC GGAVSAPVFSQVAGGALRVLNIAPDEPSNNTLLPESTPVPADF CCCCCCHHHHHHCCCEEEEEEECCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)]n-; $diphosphoundecaprenol; GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-; $diphosphoundecaprenol
Specific reaction: [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)]n- $diphosphoundecaprenol + GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu- $L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol = [GlcNAc-(1->4)- $Mur2Ac(oyl-L-Ala-gamma-
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3126399 [H]