Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is yceH [C]

Identifier: 34499758

GI number: 34499758

Start: 4644069

End: 4644731

Strand: Direct

Name: yceH [C]

Synonym: CV_4303

Alternate gene names: 34499758

Gene position: 4644069-4644731 (Clockwise)

Preceding gene: 34499757

Following gene: 34499759

Centisome position: 97.75

GC content: 69.53

Gene sequence:

>663_bases
ATGATGACAGCATTGTCTTGCCATGGAGGATGTATGGACACGCACCAACTCGACGCGGCGGAAGTGCGCGTGCTGGGCGC
GCTGCTGGAAAAGCAGGCGCTGACGCCCGACGCCTATCCGCTGACGCTGAACGCCCTCGTCGGCGCCTGCAACCAGTTGA
CCAGCCGCGAGCCGGTGATGCAGCTGTCCGAGTCCGACGCCAGCGCCGCGCTGGACGCGCTGATCGCCAAGAAGCTGGTC
GCCGAGCGGCTGCCGGCCGGCAGCCGGGTCGCCAAGTACGAGCACCGCCTCAATTACGAGTGGAACATAGACGGCGCGCG
CCTGGCCGCGCTATGCCTGCTGACGCTGCGCGGCCCGCAGACCAGTGCCGAGATCCGCGCCCGCGCCGGCCGCATCTACA
GCTTCTCCGGCGTGGACGAGGTCGAGACGGCGCTGAACGCGCTGGCCGACAAGTACCCGCCGCTGGCGGCGAAGTTGGAG
CGCCAGCCGGGCGAGCGCGAGGCGCGCTGGTGCCATTTGCTGTCCGGCGAGCCGCAAATCCTCCCGGCCCAGGCCTGCGA
AGTGATAGACGTGGGCCTGACCGGCCGCGTGGCGGCGCTGGAAGCCGAAGTGTCGGCGCTGAAGGCGATGGTGCTGGCGC
TGGAGCAGCGGCTGAACGGCTGA

Upstream 100 bases:

>100_bases
CAGCCGGCTGCGCCAGATCCGCCGCCTGCGCCAGTTGGAGGCGCTGGAGAAACGTCTGCCGGATTGAGCCGGCTTCGGGA
CGGCAGGCCGATTTGATGCG

Downstream 100 bases:

>100_bases
GCCGCGCCGTCGCGATGTCCGCGCGCAAGGCCCGGCCCCGCCGGGCCTTGCCGTTGGCGGTGGAGCCGGACGGCATGCCG
TCCCGGGGCCGCGCGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MMTALSCHGGCMDTHQLDAAEVRVLGALLEKQALTPDAYPLTLNALVGACNQLTSREPVMQLSESDASAALDALIAKKLV
AERLPAGSRVAKYEHRLNYEWNIDGARLAALCLLTLRGPQTSAEIRARAGRIYSFSGVDEVETALNALADKYPPLAAKLE
RQPGEREARWCHLLSGEPQILPAQACEVIDVGLTGRVAALEAEVSALKAMVLALEQRLNG

Sequences:

>Translated_220_residues
MMTALSCHGGCMDTHQLDAAEVRVLGALLEKQALTPDAYPLTLNALVGACNQLTSREPVMQLSESDASAALDALIAKKLV
AERLPAGSRVAKYEHRLNYEWNIDGARLAALCLLTLRGPQTSAEIRARAGRIYSFSGVDEVETALNALADKYPPLAAKLE
RQPGEREARWCHLLSGEPQILPAQACEVIDVGLTGRVAALEAEVSALKAMVLALEQRLNG
>Mature_220_residues
MMTALSCHGGCMDTHQLDAAEVRVLGALLEKQALTPDAYPLTLNALVGACNQLTSREPVMQLSESDASAALDALIAKKLV
AERLPAGSRVAKYEHRLNYEWNIDGARLAALCLLTLRGPQTSAEIRARAGRIYSFSGVDEVETALNALADKYPPLAAKLE
RQPGEREARWCHLLSGEPQILPAQACEVIDVGLTGRVAALEAEVSALKAMVLALEQRLNG

Specific function: Unknown

COG id: COG3132

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0502 family

Homologues:

Organism=Escherichia coli, GI1787306, Length=201, Percent_Identity=46.2686567164179, Blast_Score=167, Evalue=6e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4303_CHRVO (Q7NQ37)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_903973.1
- ProteinModelPortal:   Q7NQ37
- SMR:   Q7NQ37
- GeneID:   2549518
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_4303
- NMPDR:   fig|243365.1.peg.4303
- HOGENOM:   HBG298268
- OMA:   TTPDQYP
- PhylomeDB:   Q7NQ37
- BioCyc:   CVIO243365:CV_4303-MONOMER
- HAMAP:   MF_01584
- InterPro:   IPR007432
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04337 DUF480

EC number: NA

Molecular weight: Translated: 23626; Mature: 23626

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTALSCHGGCMDTHQLDAAEVRVLGALLEKQALTPDAYPLTLNALVGACNQLTSREPVM
CCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHH
QLSESDASAALDALIAKKLVAERLPAGSRVAKYEHRLNYEWNIDGARLAALCLLTLRGPQ
HHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCC
TSAEIRARAGRIYSFSGVDEVETALNALADKYPPLAAKLERQPGEREARWCHLLSGEPQI
CHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHEEHCCCCCCCE
LPAQACEVIDVGLTGRVAALEAEVSALKAMVLALEQRLNG
EHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMTALSCHGGCMDTHQLDAAEVRVLGALLEKQALTPDAYPLTLNALVGACNQLTSREPVM
CCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHH
QLSESDASAALDALIAKKLVAERLPAGSRVAKYEHRLNYEWNIDGARLAALCLLTLRGPQ
HHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCC
TSAEIRARAGRIYSFSGVDEVETALNALADKYPPLAAKLERQPGEREARWCHLLSGEPQI
CHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHEEHCCCCCCCE
LPAQACEVIDVGLTGRVAALEAEVSALKAMVLALEQRLNG
EHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782