| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yfaZ [H]
Identifier: 34499759
GI number: 34499759
Start: 4644906
End: 4645436
Strand: Direct
Name: yfaZ [H]
Synonym: CV_4304
Alternate gene names: 34499759
Gene position: 4644906-4645436 (Clockwise)
Preceding gene: 34499758
Following gene: 34499766
Centisome position: 97.77
GC content: 71.75
Gene sequence:
>531_bases ATGAAGCACTTCGCAATCGCCCTGGCGCTGGCCGGGCTGGCCGGCGGCGCCCACGCCGCCGACTACATGTTCGGCGCCGG CAACGGCACCCAGCAAATCACCCGCACGCCGGACGGTTTCGGCATCGGCCTCAACCTCGACTACCTGCGCGACGACCACA AGGGCAGCGCCGGCGGCGCCGGCCTGGAGTTCGCGCTGCCGCTGGGCCCGCTGACAGTGGCCGGCGGCGGCAAGCTGATG GCGCTGTCGCCGGACAGCGGCTCCGCCACCGCCGCGCTGGTCGGCGGCCGCGCCAGCTTCGACGTCACCCCCAAGATCAA GCTGTTCGGCCAGGCCTACTACGCGCCGAGCAGCTTCGCCAGCGGCAGCGTCAACCGCGTCAACGACTACGCCGCCGGCG TGCGCTGGAACGTGGTCGGACCGCTCAGCGTGGAGGCCGGCTACCGTTACTTCGACATCCGCCGCGACAACGACAGCCGC AGCCGCAAGCTGGCCGACGGCGCCTACCTGGGCGCCGGACTGAGCTTCTGA
Upstream 100 bases:
>100_bases ATGCCGTCCCGGGGCCGCGCGCTCGCGGCCGGCCAGATGAACTTGTTTTTTAGAAATTGGTCACTATCTGTTGTCGTTTG AACCAACAGGAATGGACCGC
Downstream 100 bases:
>100_bases CCCCACCCCATGCATGAAAAACGGCAGCCTTGGCTGCCGTTTTTCATGCCTTGCCGCTCACCACCACAAATGGAAACGCT GCGCCGGCGGCAGATACATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKHFAIALALAGLAGGAHAADYMFGAGNGTQQITRTPDGFGIGLNLDYLRDDHKGSAGGAGLEFALPLGPLTVAGGGKLM ALSPDSGSATAALVGGRASFDVTPKIKLFGQAYYAPSSFASGSVNRVNDYAAGVRWNVVGPLSVEAGYRYFDIRRDNDSR SRKLADGAYLGAGLSF
Sequences:
>Translated_176_residues MKHFAIALALAGLAGGAHAADYMFGAGNGTQQITRTPDGFGIGLNLDYLRDDHKGSAGGAGLEFALPLGPLTVAGGGKLM ALSPDSGSATAALVGGRASFDVTPKIKLFGQAYYAPSSFASGSVNRVNDYAAGVRWNVVGPLSVEAGYRYFDIRRDNDSR SRKLADGAYLGAGLSF >Mature_176_residues MKHFAIALALAGLAGGAHAADYMFGAGNGTQQITRTPDGFGIGLNLDYLRDDHKGSAGGAGLEFALPLGPLTVAGGGKLM ALSPDSGSATAALVGGRASFDVTPKIKLFGQAYYAPSSFASGSVNRVNDYAAGVRWNVVGPLSVEAGYRYFDIRRDNDSR SRKLADGAYLGAGLSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082072, Length=178, Percent_Identity=35.3932584269663, Blast_Score=73, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001702 - InterPro: IPR009998 [H]
Pfam domain/function: PF07437 YfaZ [H]
EC number: NA
Molecular weight: Translated: 18109; Mature: 18109
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHFAIALALAGLAGGAHAADYMFGAGNGTQQITRTPDGFGIGLNLDYLRDDHKGSAGGA CCHHEEEEEEHHCCCCCCCCCEEEECCCCCCEEEECCCCEEEEEEEHHCCCCCCCCCCCC GLEFALPLGPLTVAGGGKLMALSPDSGSATAALVGGRASFDVTPKIKLFGQAYYAPSSFA CEEEEECCCCEEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCC SGSVNRVNDYAAGVRWNVVGPLSVEAGYRYFDIRRDNDSRSRKLADGAYLGAGLSF CCCCCCCHHHHCCEEEEEECCEEECCCCEEEEEEECCCCHHHEECCCEEECCCCCC >Mature Secondary Structure MKHFAIALALAGLAGGAHAADYMFGAGNGTQQITRTPDGFGIGLNLDYLRDDHKGSAGGA CCHHEEEEEEHHCCCCCCCCCEEEECCCCCCEEEECCCCEEEEEEEHHCCCCCCCCCCCC GLEFALPLGPLTVAGGGKLMALSPDSGSATAALVGGRASFDVTPKIKLFGQAYYAPSSFA CEEEEECCCCEEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCC SGSVNRVNDYAAGVRWNVVGPLSVEAGYRYFDIRRDNDSRSRKLADGAYLGAGLSF CCCCCCCHHHHCCEEEEEECCEEECCCCEEEEEEECCCCHHHEECCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]