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The map label for this gene is ycbX [H]

Identifier: 34499612

GI number: 34499612

Start: 4499749

End: 4500546

Strand: Direct

Name: ycbX [H]

Synonym: CV_4157

Alternate gene names: 34499612

Gene position: 4499749-4500546 (Clockwise)

Preceding gene: 34499609

Following gene: 34499613

Centisome position: 94.71

GC content: 67.29

Gene sequence:

>798_bases
ATGCAATTGAGCGCCATGTTCGTCCATCCGGTGAAGTCGTGCCGCGGCATCGCCTTCGACCGCGCCTACGCCGGCAAGCT
GGGCCTGCTGCACGACAGGGAATGGCTGCTGGTCAGCCCGGATGGCCAGCAGATCACCGCGCGCGCGCACCCCAAACTGG
TGACCATCCGCGTGGAGCTGCTTCCCGGCGGCGCGCTGCTCCACCATTCCGGCAAGGCGCCCATCTTCGCGATGGCCACC
GCCTACACCCGTCCTCATCCGGCCCAGGTATGGAAGGACGGTTTCCAGGCCTGGCACGGCGACGAACGCGTCGATGCCTG
GTTCGCCGACATCCTCGGCTGCGACTGCCGGCTGCTGTGGCTGGGCGCGCAATCCAACCGGCCCTTCAAGGGCGGCCCGG
AAACAATGAGCTTCGCCGACGGCTATCCCTTCCTGCTGGCCAGCCAGGCCTCCCTTGACGATCTGAACCGCCAGCTGGCC
GCGCCCGTCACCCTGCGGCACTTCCGGCCCAATCTCGTCGTCTCCGGCGCCTATCCGTGGGAAGAGGACGAATGGCAGGT
GATCCGCATCGGCGACGTGGAGTTCGACGTGGTGAAACCCTGCGTGCGCTGCGTGCTGACCACCGTGGATCCCGAGCTGG
GCGAGAAGCGCGCCGACGGCGAACCGCTGCAAACCCTGATCCGGACCCGGATGCTGGACGCCGGCGTCTGTTTCGGCATG
AATTTGCGCGCTCGCAACGAGGGCGTGCTGGAGCTGGGCGCGCCGGTCGAAGTGCTGGAGCAGCGCTACAGCTTCTAG

Upstream 100 bases:

>100_bases
CGCTTGAAGCATTCCACTGAGCTACTTCAAAATGTCGCCGTTCGCCTCGCACATGCCCATCCCGTGCTAGCATGCCGCCA
ATACGAAAGCGGAGAATCCC

Downstream 100 bases:

>100_bases
ACTGCCCCCGCCGCGCATGCTTACAATCGCTGAATGAATCTGCAAGCGCTCATTGAAGATATCCGGCAGCAAGTGCTGCC
TTTCTACGACCAGGGCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MQLSAMFVHPVKSCRGIAFDRAYAGKLGLLHDREWLLVSPDGQQITARAHPKLVTIRVELLPGGALLHHSGKAPIFAMAT
AYTRPHPAQVWKDGFQAWHGDERVDAWFADILGCDCRLLWLGAQSNRPFKGGPETMSFADGYPFLLASQASLDDLNRQLA
APVTLRHFRPNLVVSGAYPWEEDEWQVIRIGDVEFDVVKPCVRCVLTTVDPELGEKRADGEPLQTLIRTRMLDAGVCFGM
NLRARNEGVLELGAPVEVLEQRYSF

Sequences:

>Translated_265_residues
MQLSAMFVHPVKSCRGIAFDRAYAGKLGLLHDREWLLVSPDGQQITARAHPKLVTIRVELLPGGALLHHSGKAPIFAMAT
AYTRPHPAQVWKDGFQAWHGDERVDAWFADILGCDCRLLWLGAQSNRPFKGGPETMSFADGYPFLLASQASLDDLNRQLA
APVTLRHFRPNLVVSGAYPWEEDEWQVIRIGDVEFDVVKPCVRCVLTTVDPELGEKRADGEPLQTLIRTRMLDAGVCFGM
NLRARNEGVLELGAPVEVLEQRYSF
>Mature_265_residues
MQLSAMFVHPVKSCRGIAFDRAYAGKLGLLHDREWLLVSPDGQQITARAHPKLVTIRVELLPGGALLHHSGKAPIFAMAT
AYTRPHPAQVWKDGFQAWHGDERVDAWFADILGCDCRLLWLGAQSNRPFKGGPETMSFADGYPFLLASQASLDDLNRQLA
APVTLRHFRPNLVVSGAYPWEEDEWQVIRIGDVEFDVVKPCVRCVLTTVDPELGEKRADGEPLQTLIRTRMLDAGVCFGM
NLRARNEGVLELGAPVEVLEQRYSF

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=283, Percent_Identity=32.8621908127208, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI31542713, Length=277, Percent_Identity=29.2418772563177, Blast_Score=118, Evalue=5e-27,
Organism=Homo sapiens, GI157388923, Length=280, Percent_Identity=26.0714285714286, Blast_Score=107, Evalue=8e-24,
Organism=Escherichia coli, GI1787179, Length=261, Percent_Identity=45.5938697318008, Blast_Score=213, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17540702, Length=293, Percent_Identity=30.0341296928328, Blast_Score=122, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17561286, Length=285, Percent_Identity=30.5263157894737, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71990971, Length=297, Percent_Identity=30.6397306397306, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI25147498, Length=247, Percent_Identity=27.5303643724696, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI45550400, Length=266, Percent_Identity=27.0676691729323, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI17647607, Length=236, Percent_Identity=25.8474576271186, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 29560; Mature: 29560

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSAMFVHPVKSCRGIAFDRAYAGKLGLLHDREWLLVSPDGQQITARAHPKLVTIRVEL
CCCCHHHHHHHHHHCCCEECCHHCCCCCEEECCCEEEECCCCCEEEEECCCEEEEEEEEE
LPGGALLHHSGKAPIFAMATAYTRPHPAQVWKDGFQAWHGDERVDAWFADILGCDCRLLW
ECCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEE
LGAQSNRPFKGGPETMSFADGYPFLLASQASLDDLNRQLAAPVTLRHFRPNLVVSGAYPW
EECCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCEEEEECCCCEEEECCCCC
EEDEWQVIRIGDVEFDVVKPCVRCVLTTVDPELGEKRADGEPLQTLIRTRMLDAGVCFGM
CCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCEEECC
NLRARNEGVLELGAPVEVLEQRYSF
EEEECCCCEEEECCCHHHHHHHHCC
>Mature Secondary Structure
MQLSAMFVHPVKSCRGIAFDRAYAGKLGLLHDREWLLVSPDGQQITARAHPKLVTIRVEL
CCCCHHHHHHHHHHCCCEECCHHCCCCCEEECCCEEEECCCCCEEEEECCCEEEEEEEEE
LPGGALLHHSGKAPIFAMATAYTRPHPAQVWKDGFQAWHGDERVDAWFADILGCDCRLLW
ECCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEE
LGAQSNRPFKGGPETMSFADGYPFLLASQASLDDLNRQLAAPVTLRHFRPNLVVSGAYPW
EECCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCEEEEECCCCEEEECCCCC
EEDEWQVIRIGDVEFDVVKPCVRCVLTTVDPELGEKRADGEPLQTLIRTRMLDAGVCFGM
CCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCEEECC
NLRARNEGVLELGAPVEVLEQRYSF
EEEECCCCEEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]