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The map label for this gene is rfbG [H]

Identifier: 34499347

GI number: 34499347

Start: 4200963

End: 4202009

Strand: Reverse

Name: rfbG [H]

Synonym: CV_3892

Alternate gene names: 34499347

Gene position: 4202009-4200963 (Counterclockwise)

Preceding gene: 34499348

Following gene: 34499346

Centisome position: 88.44

GC content: 70.3

Gene sequence:

>1047_bases
GTGAATCCGGCCTTCTGGCGCGGGCGCAAGGTATTCCTGACCGGCCACACTGGCTTCAAGGGCGGCTGGCTCAGCCTGTG
GCTGGCCGACATGGGGGCCGAGGTGCACGGCTACTCGCTGCCGCCGGAGCAGTCGCCGGCGCTATTCGAGGCCGCCGGCG
TCGGCGGCCGCACCATGGGTATGCTGGCCGATATCCGCGACGCGGCGGCTCTGGCCGACGCGATGCGCTCCTGTCGCCCC
TCCATCGTTTTCCATCTGGCGGCGCAGCCTCTGGTCCGGCACAGCTACGCCGATCCGCTGGGCACTTTCACGACCAATGT
GATGGGCACCGCCAACCTGCTGGACGCGGCGCGCCATTGTCCGGGCGTGGAGGCCGTAGTGGCCGTCACCACCGACAAGT
GCTACGAAAACCATGAATGGCCGTGGGCCTACCGCGAGAGCGACGCGCTGGGCGGCCACGATCCCTACAGCAGCAGCAAG
GCCTGCGCCGAGCTGGTGTGCGCCGCTTACCGGCGCTCCTATCCCGGCATGGCCCCCATCGCCACCGCCCGCGCCGGCAA
TGTGATAGGCGGCGGCGACTGGTCGGCCAACCGGCTGGTGCCCGACTTGCTGCAAGCCTTCTCCGAGAACCGCTCGCTGG
CGATACGCAGCCCGGACGCCGTCCGTCCCTGGCAGCACGTGCTGGAGTCGCTGGCTGGTTACCTGCGGCTGGCCGAGCGC
CTGGCGCAGGGGCAGGATGATGCCGCGTCGGCCTGGAATTTCGGCCCCGCCGACGACAGCAATCGTCCGGTGTCCTGGAT
CGCCGACACGCTGGCCCGGCAATGGGGCGGCGACGCCCGCTGGCACCGCGACGGCGGCGACCATCCGCACGAGGCGCAGA
CCCTGCGGCTGGACAGCGCCAAGTCCCGCCAGCGGCTGGGCTGGTCGCCGCGCTGGAGCCTGGAGCAGGCCTTGTCGGCC
ACGCTGGACTGGCATCGCGCCTGGCTGCGCGGCGAGGACATGCAGGCCTTCACCTTAAAGCAGATCTCAGCCTATACGCG
CGGCTGA

Upstream 100 bases:

>100_bases
CTTACGAACACAGCGGTTTCTGGCAGCCGATGGACACGCTGCGCGACAAGACCCTGCTCGAGGAGTTGTGGCAGAGCGGG
GAGGCGCCGTGGAAGCTGTG

Downstream 100 bases:

>100_bases
GCAGAGAGAGCAAGACATGACTGACACAAGCCGAGAGGCCATTCTCGCCCTGGTGCGTCAATACGCCGAAGCGCGCCTGG
CCCAGGCCGAATTCATTCCC

Product: cdpglucose 4,6-dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MNPAFWRGRKVFLTGHTGFKGGWLSLWLADMGAEVHGYSLPPEQSPALFEAAGVGGRTMGMLADIRDAAALADAMRSCRP
SIVFHLAAQPLVRHSYADPLGTFTTNVMGTANLLDAARHCPGVEAVVAVTTDKCYENHEWPWAYRESDALGGHDPYSSSK
ACAELVCAAYRRSYPGMAPIATARAGNVIGGGDWSANRLVPDLLQAFSENRSLAIRSPDAVRPWQHVLESLAGYLRLAER
LAQGQDDAASAWNFGPADDSNRPVSWIADTLARQWGGDARWHRDGGDHPHEAQTLRLDSAKSRQRLGWSPRWSLEQALSA
TLDWHRAWLRGEDMQAFTLKQISAYTRG

Sequences:

>Translated_348_residues
MNPAFWRGRKVFLTGHTGFKGGWLSLWLADMGAEVHGYSLPPEQSPALFEAAGVGGRTMGMLADIRDAAALADAMRSCRP
SIVFHLAAQPLVRHSYADPLGTFTTNVMGTANLLDAARHCPGVEAVVAVTTDKCYENHEWPWAYRESDALGGHDPYSSSK
ACAELVCAAYRRSYPGMAPIATARAGNVIGGGDWSANRLVPDLLQAFSENRSLAIRSPDAVRPWQHVLESLAGYLRLAER
LAQGQDDAASAWNFGPADDSNRPVSWIADTLARQWGGDARWHRDGGDHPHEAQTLRLDSAKSRQRLGWSPRWSLEQALSA
TLDWHRAWLRGEDMQAFTLKQISAYTRG
>Mature_348_residues
MNPAFWRGRKVFLTGHTGFKGGWLSLWLADMGAEVHGYSLPPEQSPALFEAAGVGGRTMGMLADIRDAAALADAMRSCRP
SIVFHLAAQPLVRHSYADPLGTFTTNVMGTANLLDAARHCPGVEAVVAVTTDKCYENHEWPWAYRESDALGGHDPYSSSK
ACAELVCAAYRRSYPGMAPIATARAGNVIGGGDWSANRLVPDLLQAFSENRSLAIRSPDAVRPWQHVLESLAGYLRLAER
LAQGQDDAASAWNFGPADDSNRPVSWIADTLARQWGGDARWHRDGGDHPHEAQTLRLDSAKSRQRLGWSPRWSLEQALSA
TLDWHRAWLRGEDMQAFTLKQISAYTRG

Specific function: DTDP-L-RHAMNOSE BIOSYNTHESIS WITHIN THE O ANTIGEN BIOSYNTHESIS PATHWAY OF LIPOPOLYSACCHARIDE BIOSYNTHESIS. [C]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788353, Length=286, Percent_Identity=26.2237762237762, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI48994969, Length=335, Percent_Identity=24.1791044776119, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17507723, Length=360, Percent_Identity=23.0555555555556, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013445
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =4.2.1.45 [H]

Molecular weight: Translated: 38178; Mature: 38178

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPAFWRGRKVFLTGHTGFKGGWLSLWLADMGAEVHGYSLPPEQSPALFEAAGVGGRTMG
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHH
MLADIRDAAALADAMRSCRPSIVFHLAAQPLVRHSYADPLGTFTTNVMGTANLLDAARHC
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
PGVEAVVAVTTDKCYENHEWPWAYRESDALGGHDPYSSSKACAELVCAAYRRSYPGMAPI
CCCEEEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCH
ATARAGNVIGGGDWSANRLVPDLLQAFSENRSLAIRSPDAVRPWQHVLESLAGYLRLAER
HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
LAQGQDDAASAWNFGPADDSNRPVSWIADTLARQWGGDARWHRDGGDHPHEAQTLRLDSA
HHCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCH
KSRQRLGWSPRWSLEQALSATLDWHRAWLRGEDMQAFTLKQISAYTRG
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNPAFWRGRKVFLTGHTGFKGGWLSLWLADMGAEVHGYSLPPEQSPALFEAAGVGGRTMG
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHH
MLADIRDAAALADAMRSCRPSIVFHLAAQPLVRHSYADPLGTFTTNVMGTANLLDAARHC
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
PGVEAVVAVTTDKCYENHEWPWAYRESDALGGHDPYSSSKACAELVCAAYRRSYPGMAPI
CCCEEEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCH
ATARAGNVIGGGDWSANRLVPDLLQAFSENRSLAIRSPDAVRPWQHVLESLAGYLRLAER
HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
LAQGQDDAASAWNFGPADDSNRPVSWIADTLARQWGGDARWHRDGGDHPHEAQTLRLDSA
HHCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCH
KSRQRLGWSPRWSLEQALSATLDWHRAWLRGEDMQAFTLKQISAYTRG
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]