| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499222
Identifier: 34499222
GI number: 34499222
Start: 4065603
End: 4065812
Strand: Reverse
Name: 34499222
Synonym: CV_3767
Alternate gene names: NA
Gene position: 4065812-4065603 (Counterclockwise)
Preceding gene: 34499223
Following gene: 34499221
Centisome position: 85.58
GC content: 66.67
Gene sequence:
>210_bases ATGAGTCAATTGAATCTGCGCATCAACGGCGAAGATCGGAGTTTCTCGGGCATCGCCACCTTCGCCGAGCTGGTCGAAGC CTTGCAGCTGGGCGGCAAGCGCATCGCCATCGAGCGCAACGGCGAGATCGTGCCCCGCGGCCGGCATGCCGAAGCGCGGC TGGCGGACGGCGACGTGCTGGAAATCGTGGTGGCGGTCGGCGGCGGCTGA
Upstream 100 bases:
>100_bases TCAATATCCACTTCCGCCTGCAGGTGGAAGGCGTGGAGCACCTGGAGCGCGTGCTCGCCGCCGTCCGCCAACTGGCGGTG GTGCAGCGCGTGGAGAGAAG
Downstream 100 bases:
>100_bases AACCGTCTGTCCGCCATTCTAAGGCCAATGGAAGAAAAGGGAATGCAGGTGGACGACAAACTGGTGATAGCCGGCAGGGA GTACGGCTCTCGCTTGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Thiamine-Biosynthesis Protein ThiS; ThiS Protein; Thiamin Biosynthesis ThiS; Thiamine-Biosynthesis Protein; Thiamine Biosynthesis Protein; ThiS Thiamine-Biosynthesis; Sulfur Carrier Protein ThiS
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSQLNLRINGEDRSFSGIATFAELVEALQLGGKRIAIERNGEIVPRGRHAEARLADGDVLEIVVAVGGG
Sequences:
>Translated_69_residues MSQLNLRINGEDRSFSGIATFAELVEALQLGGKRIAIERNGEIVPRGRHAEARLADGDVLEIVVAVGGG >Mature_68_residues SQLNLRINGEDRSFSGIATFAELVEALQLGGKRIAIERNGEIVPRGRHAEARLADGDVLEIVVAVGGG
Specific function: Unknown
COG id: COG2104
COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7314; Mature: 7183
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLNLRINGEDRSFSGIATFAELVEALQLGGKRIAIERNGEIVPRGRHAEARLADGDVL CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCEECCCCEE EIVVAVGGG EEEEEECCC >Mature Secondary Structure SQLNLRINGEDRSFSGIATFAELVEALQLGGKRIAIERNGEIVPRGRHAEARLADGDVL CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCEECCCCEE EIVVAVGGG EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA