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The map label for this gene is cmpR [H]

Identifier: 34499120

GI number: 34499120

Start: 3967452

End: 3968342

Strand: Reverse

Name: cmpR [H]

Synonym: CV_3665

Alternate gene names: 34499120

Gene position: 3968342-3967452 (Counterclockwise)

Preceding gene: 34499122

Following gene: 34499118

Centisome position: 83.53

GC content: 68.91

Gene sequence:

>891_bases
ATGTCTATCAGTCTGGAAGATCTCGAATTGCTGCTGGACGTGGCCGAGCTGGGCAGCTTCAGCCAAGCCGCCGCACGCAG
GGGATGGTCGCAGCCTCAGGCCAGCCAGCGCGTCGCCTTGCTGGAGAAGCGCTTGGGCGCGCCGTTGTTCAGCCGGCACC
GCCGCGGCGCGGAGCCGACGGCGGCTTGCCAGGCCTTCCTGCCGGCGGCGCGGGCGGCGCTGGATGCGCTGGCCGAGGGG
CGGAATAGGCTGGCGGGAGCGGAGGGTTTGCCGCGGCTGAGGATGGCTTGCCTGCCTTCGTTGGCTGGCGTGATATTCGG
ACCCTTGCTGCATAGGCTGGCCGAGGCGCCGATGGAAATCCGCTGCGATACCGACCATTCGCCCCAGATACTGCAATTGT
TGCTGGCAGGAGAGCTGGATATCGGTTTCGTGCTGCATCGGCCGGCCATTCCGGGGCTGGAACAGGACGTTCTGTGCGAT
TCGCCCATCGTGGCGGTGGCGGAAGCTGCCCATCCGCTGGCGGCGGCTGAGCGGCCGTTGTCGCTCGGCCGGCTTGCCGG
ATATCCGCTGGCGCCGCAGAACTGGGGGGAGGGCGCGGAAGAGCTGGTCCGTCGGCTGAGGGGCCAGTGCGCGTCGGCGC
GGCCCATCCATTTGCTGCAACCGGCCGCGGCAGCGAGGGATCTGGCCTTGTGGCATGGCTACGTGGCCTTTGTGCCGCGG
CTGGCGGTGAGGCAGGAGCTGGAGAAGGGCGTATTGCGGGAGTTGGCGCTGGCGGAGCCGGAACTGGGACGATGGCGGGT
GATGATGGCATGGCGCGGCGGCAAGCGGCGCGATGCCGCCAAGACGATGGCGCTGGATGCGGCGAGGGCCCTGGCCCGCG
ACTGGCGTTAA

Upstream 100 bases:

>100_bases
CATGGCTGGTCTTTTGTCCTATCAGTCGAGACGCTCATTGTCGGCAGTAGCCAGATATCATGTAAGGACTTGGCTGAAAT
GTTTGTTATGGATTTTCATT

Downstream 100 bases:

>100_bases
GGGGAGGGCGCGCGCGGGCAAGAAAAAAGCCCCCGGAAAACCGGGGGCTGTGTTTCTGCTTCCTCAGGCGCGCACAGCGG
CGATGGCGGCGTTGAAGGTG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSISLEDLELLLDVAELGSFSQAAARRGWSQPQASQRVALLEKRLGAPLFSRHRRGAEPTAACQAFLPAARAALDALAEG
RNRLAGAEGLPRLRMACLPSLAGVIFGPLLHRLAEAPMEIRCDTDHSPQILQLLLAGELDIGFVLHRPAIPGLEQDVLCD
SPIVAVAEAAHPLAAAERPLSLGRLAGYPLAPQNWGEGAEELVRRLRGQCASARPIHLLQPAAAARDLALWHGYVAFVPR
LAVRQELEKGVLRELALAEPELGRWRVMMAWRGGKRRDAAKTMALDAARALARDWR

Sequences:

>Translated_296_residues
MSISLEDLELLLDVAELGSFSQAAARRGWSQPQASQRVALLEKRLGAPLFSRHRRGAEPTAACQAFLPAARAALDALAEG
RNRLAGAEGLPRLRMACLPSLAGVIFGPLLHRLAEAPMEIRCDTDHSPQILQLLLAGELDIGFVLHRPAIPGLEQDVLCD
SPIVAVAEAAHPLAAAERPLSLGRLAGYPLAPQNWGEGAEELVRRLRGQCASARPIHLLQPAAAARDLALWHGYVAFVPR
LAVRQELEKGVLRELALAEPELGRWRVMMAWRGGKRRDAAKTMALDAARALARDWR
>Mature_295_residues
SISLEDLELLLDVAELGSFSQAAARRGWSQPQASQRVALLEKRLGAPLFSRHRRGAEPTAACQAFLPAARAALDALAEGR
NRLAGAEGLPRLRMACLPSLAGVIFGPLLHRLAEAPMEIRCDTDHSPQILQLLLAGELDIGFVLHRPAIPGLEQDVLCDS
PIVAVAEAAHPLAAAERPLSLGRLAGYPLAPQNWGEGAEELVRRLRGQCASARPIHLLQPAAAARDLALWHGYVAFVPRL
AVRQELEKGVLRELALAEPELGRWRVMMAWRGGKRRDAAKTMALDAARALARDWR

Specific function: Activates transcription of the cmpABCD operon under carbon dioxide-limited conditions. Specifically binds to the cmpR- cmpA intergenic region [H]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081904, Length=258, Percent_Identity=29.0697674418605, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI157672245, Length=182, Percent_Identity=32.967032967033, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787879, Length=197, Percent_Identity=31.4720812182741, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32143; Mature: 32012

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISLEDLELLLDVAELGSFSQAAARRGWSQPQASQRVALLEKRLGAPLFSRHRRGAEPT
CCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCHH
AACQAFLPAARAALDALAEGRNRLAGAEGLPRLRMACLPSLAGVIFGPLLHRLAEAPMEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
RCDTDHSPQILQLLLAGELDIGFVLHRPAIPGLEQDVLCDSPIVAVAEAAHPLAAAERPL
EECCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCC
SLGRLAGYPLAPQNWGEGAEELVRRLRGQCASARPIHLLQPAAAARDLALWHGYVAFVPR
HHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHH
LAVRQELEKGVLRELALAEPELGRWRVMMAWRGGKRRDAAKTMALDAARALARDWR
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SISLEDLELLLDVAELGSFSQAAARRGWSQPQASQRVALLEKRLGAPLFSRHRRGAEPT
CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCHH
AACQAFLPAARAALDALAEGRNRLAGAEGLPRLRMACLPSLAGVIFGPLLHRLAEAPMEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
RCDTDHSPQILQLLLAGELDIGFVLHRPAIPGLEQDVLCDSPIVAVAEAAHPLAAAERPL
EECCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCC
SLGRLAGYPLAPQNWGEGAEELVRRLRGQCASARPIHLLQPAAAARDLALWHGYVAFVPR
HHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHH
LAVRQELEKGVLRELALAEPELGRWRVMMAWRGGKRRDAAKTMALDAARALARDWR
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]