| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34499021
Identifier: 34499021
GI number: 34499021
Start: 3872707
End: 3873156
Strand: Direct
Name: 34499021
Synonym: CV_3566
Alternate gene names: NA
Gene position: 3872707-3873156 (Clockwise)
Preceding gene: 34499019
Following gene: 34499030
Centisome position: 81.51
GC content: 67.33
Gene sequence:
>450_bases ATGAAAAACGATCAGACCCGGCTGTGTCCCAGCTCAACCTTCGAGGGTGAAGGCAATATGGTGTTCGGCATTGTCGGCGG CAGCGCGCGGCAGCGCCGCGTGATCTATCTGAAGCAGATGCTGCCGGCCAACCAGATAGATCGCGCCAGGCTGGAAGACA TCGCGCCGGAAGAAGTATTCCGCACCGCCGGCCCTTGCGCCAAAAGCCAGTGCGCCCATCACGACAACGCCGCTGCGCGC TGCACGCTGGCCGAACGCGTGGTGGCCGCGGCGGCCGAGGTGGTCGACCGGCTGGCTTATTGCGCGATACGCCCCCGCTG CATGTGGTGGAGCCAGCACGGCCGGGATGCCTGCGCGCGCTGTCCGCAGGTGGTGTCCATCGATCGCCAGCCGGACGAAG CCATCGCCCAGGCCCGGATGCCGCCCGGATCCGCCTCGGCCGGCTGTTGA
Upstream 100 bases:
>100_bases CCGCCGCGCATGACCGGAAAAATCGTATTGCCGCCGGCCAGGCCATAAACCGGCCAGCCGTACACCGACATCATCCATTC CGGCATCGACGCGAACCGAT
Downstream 100 bases:
>100_bases AGCCTTTCAAGCCATCGCTCAGAAAAGAAAGAATCGATATGAAAGCAACCCAAACCCTGCAACGCTCGGAATGGAACGCC CAATTGGACCGCAGCCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKNDQTRLCPSSTFEGEGNMVFGIVGGSARQRRVIYLKQMLPANQIDRARLEDIAPEEVFRTAGPCAKSQCAHHDNAAAR CTLAERVVAAAAEVVDRLAYCAIRPRCMWWSQHGRDACARCPQVVSIDRQPDEAIAQARMPPGSASAGC
Sequences:
>Translated_149_residues MKNDQTRLCPSSTFEGEGNMVFGIVGGSARQRRVIYLKQMLPANQIDRARLEDIAPEEVFRTAGPCAKSQCAHHDNAAAR CTLAERVVAAAAEVVDRLAYCAIRPRCMWWSQHGRDACARCPQVVSIDRQPDEAIAQARMPPGSASAGC >Mature_149_residues MKNDQTRLCPSSTFEGEGNMVFGIVGGSARQRRVIYLKQMLPANQIDRARLEDIAPEEVFRTAGPCAKSQCAHHDNAAAR CTLAERVVAAAAEVVDRLAYCAIRPRCMWWSQHGRDACARCPQVVSIDRQPDEAIAQARMPPGSASAGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16258; Mature: 16258
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDQTRLCPSSTFEGEGNMVFGIVGGSARQRRVIYLKQMLPANQIDRARLEDIAPEEVF CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH RTAGPCAKSQCAHHDNAAARCTLAERVVAAAAEVVDRLAYCAIRPRCMWWSQHGRDACAR HHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHH CPQVVSIDRQPDEAIAQARMPPGSASAGC CCCEEECCCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKNDQTRLCPSSTFEGEGNMVFGIVGGSARQRRVIYLKQMLPANQIDRARLEDIAPEEVF CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH RTAGPCAKSQCAHHDNAAARCTLAERVVAAAAEVVDRLAYCAIRPRCMWWSQHGRDACAR HHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHH CPQVVSIDRQPDEAIAQARMPPGSASAGC CCCEEECCCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA