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The map label for this gene is frdC [H]

Identifier: 34498822

GI number: 34498822

Start: 3662984

End: 3663382

Strand: Reverse

Name: frdC [H]

Synonym: CV_3367

Alternate gene names: 34498822

Gene position: 3663382-3662984 (Counterclockwise)

Preceding gene: 34498823

Following gene: 34498821

Centisome position: 77.11

GC content: 64.66

Gene sequence:

>399_bases
ATGAGCAAGCGCAAGCCCTACGTCCGGCCGATGGAAGGCTGGTGGAAGAAGAACCCCTACTTCATCGAGTACATGATCCA
CGAGGGCACGGCGCTGTTCGTCGCCGCCTACGGTTTTGTGCTGCTGTTCGGCCTGTGGCGCTTGAGCCAGGGCGAGGCGG
CGTGGAACGGCTTCGTCGCCGCGCTGCGAAGCCCGCTGTCCATGCTGTTGCACCTGATCCTGCTCGCCATGATCGGCTAT
CACGGCTACACCTGGTTCAAGATCATGCCGCGCACCTTGCCGCCGCTGATCATCGGCGGCAGGCGCGTCTCCGCCACCGC
CATCACAGCCGGGGGCTTCGCCGCTACCTTGCTGGCCAGCCTGGCCTTGCTGGGCGTCGTATGGGGGATCTCGCAATGA

Upstream 100 bases:

>100_bases
GTCCCAAGGCGGTGGACCCGGCCAATGCGGTCAACCTGAACAAGACCGAAGTGGCCAAGGACTATTTCCTGCGATTCGTC
AGACCTAAGGGAGCATGCCA

Downstream 100 bases:

>100_bases
AAAACCGCCAATTGAAGCGTTCCCACGCGCCCATCTTCTGGGGATTGTTCGGCGCAGGCGGCATGCTGGCCGCGCTGTTC
GGGCCGATGCTGGTGGCCAT

Product: fumarate reductase subunit C

Products: fumarate; NADH; H+

Alternate protein names: Fumarate reductase 15 kDa hydrophobic protein [H]

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSKRKPYVRPMEGWWKKNPYFIEYMIHEGTALFVAAYGFVLLFGLWRLSQGEAAWNGFVAALRSPLSMLLHLILLAMIGY
HGYTWFKIMPRTLPPLIIGGRRVSATAITAGGFAATLLASLALLGVVWGISQ

Sequences:

>Translated_132_residues
MSKRKPYVRPMEGWWKKNPYFIEYMIHEGTALFVAAYGFVLLFGLWRLSQGEAAWNGFVAALRSPLSMLLHLILLAMIGY
HGYTWFKIMPRTLPPLIIGGRRVSATAITAGGFAATLLASLALLGVVWGISQ
>Mature_131_residues
SKRKPYVRPMEGWWKKNPYFIEYMIHEGTALFVAAYGFVLLFGLWRLSQGEAAWNGFVAALRSPLSMLLHLILLAMIGYH
GYTWFKIMPRTLPPLIIGGRRVSATAITAGGFAATLLASLALLGVVWGISQ

Specific function: Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane [H]

COG id: COG3029

COG function: function code C; Fumarate reductase subunit C

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frdC family [H]

Homologues:

Organism=Escherichia coli, GI1790595, Length=126, Percent_Identity=38.8888888888889, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003510
- ProDom:   PD015900 [H]

Pfam domain/function: PF02300 Fumarate_red_C [H]

EC number: 1.3.1.6

Molecular weight: Translated: 14702; Mature: 14571

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRKPYVRPMEGWWKKNPYFIEYMIHEGTALFVAAYGFVLLFGLWRLSQGEAAWNGFVA
CCCCCCCCCCCHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALRSPLSMLLHLILLAMIGYHGYTWFKIMPRTLPPLIIGGRRVSATAITAGGFAATLLAS
HHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCEEECCCEEEHEEEECCHHHHHHHHH
LALLGVVWGISQ
HHHHHHHHCCCC
>Mature Secondary Structure 
SKRKPYVRPMEGWWKKNPYFIEYMIHEGTALFVAAYGFVLLFGLWRLSQGEAAWNGFVA
CCCCCCCCCCHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALRSPLSMLLHLILLAMIGYHGYTWFKIMPRTLPPLIIGGRRVSATAITAGGFAATLLAS
HHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCEEECCCEEEHEEEECCHHHHHHHHH
LALLGVVWGISQ
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; NAD+

Specific reaction: succinate + NAD+ = fumarate + NADH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA