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The map label for this gene is yjjK [C]

Identifier: 34498815

GI number: 34498815

Start: 3655957

End: 3657624

Strand: Direct

Name: yjjK [C]

Synonym: CV_3360

Alternate gene names: 34498815

Gene position: 3655957-3657624 (Clockwise)

Preceding gene: 34498814

Following gene: 34498817

Centisome position: 76.95

GC content: 64.93

Gene sequence:

>1668_bases
ATGGCCCAATACGTGATGTCGATGCTCCGCGTGAGCAAGATCGTCCCGCCCAAGCGGCAAATCATCAAGGATATCTCCCT
CAGCTTCTTCCCCGGCGCCAAGATCGGCCTGCTGGGCCTGAACGGCGCGGGCAAATCCACCGTGCTGAAGATCATGGCCG
GCGTCGAGAAGGAATACGACGGCGAAGTGCAGTGGCAGCCCAACCTGAACATCGGCTACCTGCCGCAGGAGCCGCAGCTG
GATCCGGAAAAAACCGTGCGCGAGGAAGTGGAAAGCGGCATGGGCGAAGTGATGGGCGCGCAGAAGCGCCTGGAAGAGGT
CTACGCCGCCTACGCCGATCCGGACGCCGACTTCGACGCCCTGGCCGAGGAACAGGCCAAGCTGGAAGCCATCATCGCCG
CCGGCGCCAACGACAACGTCGAGCACCAGCTGGAAATCGCCGCCGACGCGCTGCGCCTGCCGCCGTGGGACGCCAAGATC
GGCCCGCTGTCCGGCGGCGAGAAGCGCCGCGTGGCGCTGTGCAAGCTGCTGCTGTCCAAGCCTGACATGCTGCTGCTGGA
CGAGCCGACCAACCACCTGGACGCCGAATCGGTCGAATGGCTGGAGCAGTTCCTGGTGCGCTTCCCCGGCACCGTGGTGG
CCGTCACCCACGACCGCTACTTCCTCGACAACGCCGCCGAATGGATCCTGGAGCTGGACCGCGGCGAAGGCATTCCCTGG
AAGGGCAATTACTCCGGCTGGCTGGAACAGAAGGAAGCGCGCCTGGCTCAGGAAGCCAAGGGCGAGGCCGCGCGCCAGAA
GGCGATGAAGCAGGAGCTGGAATGGGTGCGCCAGAACCCCAAGGGCCGCCAGGCCAAGTCCAAGGCGCGCATCGCCCGCT
TCGAGGAGCTGTCCAGCTTTGAGACCCAGAAGCGCAACGAGACCCAGGAAATCTTCATCCCGGTGGCCGAGCGCCTGGGC
AATGAAGTGATCGAGTTCGAAGGCGTGTCCAAAGGCTTCGGCGACCGCCTGCTGATCGACAACCTCAGCTTCAAGGCTCC
GCCGGGCGCCATCGTCGGCATCATCGGCCCCAACGGCGCCGGTAAATCGACGCTGTTCAAGATGATCGCCGGCAAGGAGC
AGCCGGACAGCGGCACGGTCAAGATCGGCCAGACCGTGCAGATGGCTTTCGTCGAGCAAAGCCGCGAAGGCCTGGACGGC
GACAAGACCGTGTTCGAGGACGTGGCCGCCGGCGCCGACATCCTGACCGTCGGCAAGTTCGAGATGTCCAGCCGCGCTTA
CCTCGGCCGCTTCAACTTCAAGGGCGCCGACCAGCAGAAGAAGGTGGGCATGCTGTCGGGCGGCGAACGCGGCCGCCTGC
ACCTGGCCAAGACCCTGCTCAAGGGCGGCAACGTGCTGCTGCTGGACGAACCGTCCAACGACCTCGACGTGGAAACCCTG
CGCGCGCTGGAAGACGCCTTGCTGGAATACGCCGGCACCGTGTTCGTGATCTCCCACGACCGCTGGTTCCTGGACCGGAT
CGCCACCCACATCCTGGCGGCCGAAGGCGAATCGCAATGGACCTTCTTCGACGGCAACTATCAGGAATACGAGGCCGACA
AGAAGAAGCGCCTGGGCGAGGAAGGCGCCAAGCCCAAGCGCATCCGCTACAAGCCGATCAGCCGCTGA

Upstream 100 bases:

>100_bases
GCACTGCCGCTGACCGCCATCCGCTCATCCCGGCCGCAGGATGGGCGCGGATTTCGTTATAATCGACGCTTAGTCCCATC
CAACCAATGTGAACGCACTC

Downstream 100 bases:

>100_bases
TCCGCGGACAACAGCAAGCCCCCTTCGCCGGGGGCTTTTTTGCCGTCACTCCAGATAATGCGCCGCCACGCGCGCGCCGG
TGCCGTCGTCGCGCAGCTGC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MAQYVMSMLRVSKIVPPKRQIIKDISLSFFPGAKIGLLGLNGAGKSTVLKIMAGVEKEYDGEVQWQPNLNIGYLPQEPQL
DPEKTVREEVESGMGEVMGAQKRLEEVYAAYADPDADFDALAEEQAKLEAIIAAGANDNVEHQLEIAADALRLPPWDAKI
GPLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGEGIPW
KGNYSGWLEQKEARLAQEAKGEAARQKAMKQELEWVRQNPKGRQAKSKARIARFEELSSFETQKRNETQEIFIPVAERLG
NEVIEFEGVSKGFGDRLLIDNLSFKAPPGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGTVKIGQTVQMAFVEQSREGLDG
DKTVFEDVAAGADILTVGKFEMSSRAYLGRFNFKGADQQKKVGMLSGGERGRLHLAKTLLKGGNVLLLDEPSNDLDVETL
RALEDALLEYAGTVFVISHDRWFLDRIATHILAAEGESQWTFFDGNYQEYEADKKKRLGEEGAKPKRIRYKPISR

Sequences:

>Translated_555_residues
MAQYVMSMLRVSKIVPPKRQIIKDISLSFFPGAKIGLLGLNGAGKSTVLKIMAGVEKEYDGEVQWQPNLNIGYLPQEPQL
DPEKTVREEVESGMGEVMGAQKRLEEVYAAYADPDADFDALAEEQAKLEAIIAAGANDNVEHQLEIAADALRLPPWDAKI
GPLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGEGIPW
KGNYSGWLEQKEARLAQEAKGEAARQKAMKQELEWVRQNPKGRQAKSKARIARFEELSSFETQKRNETQEIFIPVAERLG
NEVIEFEGVSKGFGDRLLIDNLSFKAPPGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGTVKIGQTVQMAFVEQSREGLDG
DKTVFEDVAAGADILTVGKFEMSSRAYLGRFNFKGADQQKKVGMLSGGERGRLHLAKTLLKGGNVLLLDEPSNDLDVETL
RALEDALLEYAGTVFVISHDRWFLDRIATHILAAEGESQWTFFDGNYQEYEADKKKRLGEEGAKPKRIRYKPISR
>Mature_554_residues
AQYVMSMLRVSKIVPPKRQIIKDISLSFFPGAKIGLLGLNGAGKSTVLKIMAGVEKEYDGEVQWQPNLNIGYLPQEPQLD
PEKTVREEVESGMGEVMGAQKRLEEVYAAYADPDADFDALAEEQAKLEAIIAAGANDNVEHQLEIAADALRLPPWDAKIG
PLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGEGIPWK
GNYSGWLEQKEARLAQEAKGEAARQKAMKQELEWVRQNPKGRQAKSKARIARFEELSSFETQKRNETQEIFIPVAERLGN
EVIEFEGVSKGFGDRLLIDNLSFKAPPGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGTVKIGQTVQMAFVEQSREGLDGD
KTVFEDVAAGADILTVGKFEMSSRAYLGRFNFKGADQQKKVGMLSGGERGRLHLAKTLLKGGNVLLLDEPSNDLDVETLR
ALEDALLEYAGTVFVISHDRWFLDRIATHILAAEGESQWTFFDGNYQEYEADKKKRLGEEGAKPKRIRYKPISR

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=529, Percent_Identity=27.7882797731569, Blast_Score=186, Evalue=7e-47,
Organism=Homo sapiens, GI10947137, Length=540, Percent_Identity=29.2592592592593, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI27881506, Length=539, Percent_Identity=29.3135435992579, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI69354671, Length=541, Percent_Identity=28.0961182994455, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI10947135, Length=541, Percent_Identity=28.0961182994455, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI171184400, Length=200, Percent_Identity=30, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI73747915, Length=223, Percent_Identity=26.457399103139, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI2367384, Length=555, Percent_Identity=69.1891891891892, Blast_Score=795, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=516, Percent_Identity=35.2713178294574, Blast_Score=282, Evalue=3e-77,
Organism=Escherichia coli, GI1787041, Length=525, Percent_Identity=34.4761904761905, Blast_Score=256, Evalue=3e-69,
Organism=Escherichia coli, GI1789751, Length=551, Percent_Identity=31.5789473684211, Blast_Score=253, Evalue=3e-68,
Organism=Escherichia coli, GI87081782, Length=552, Percent_Identity=25.1811594202899, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI87081709, Length=192, Percent_Identity=30.2083333333333, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI48994943, Length=477, Percent_Identity=23.2704402515723, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1788165, Length=193, Percent_Identity=34.1968911917098, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1786975, Length=532, Percent_Identity=24.0601503759398, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1788225, Length=209, Percent_Identity=27.7511961722488, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1788761, Length=205, Percent_Identity=28.780487804878, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87081791, Length=196, Percent_Identity=30.1020408163265, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787164, Length=194, Percent_Identity=27.8350515463918, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1787712, Length=195, Percent_Identity=29.2307692307692, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1786398, Length=208, Percent_Identity=29.8076923076923, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1790525, Length=209, Percent_Identity=26.7942583732057, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789891, Length=236, Percent_Identity=22.0338983050847, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1787370, Length=193, Percent_Identity=28.4974093264249, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786345, Length=240, Percent_Identity=30, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786803, Length=208, Percent_Identity=31.7307692307692, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=28.110599078341, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1789873, Length=210, Percent_Identity=29.0476190476191, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786563, Length=180, Percent_Identity=28.8888888888889, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790467, Length=219, Percent_Identity=29.6803652968037, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1789864, Length=228, Percent_Identity=22.8070175438596, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786698, Length=194, Percent_Identity=28.3505154639175, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1788450, Length=212, Percent_Identity=28.3018867924528, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788472, Length=206, Percent_Identity=28.1553398058252, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI48995001, Length=208, Percent_Identity=28.3653846153846, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=558, Percent_Identity=28.3154121863799, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17553372, Length=535, Percent_Identity=29.1588785046729, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17555318, Length=560, Percent_Identity=26.9642857142857, Blast_Score=167, Evalue=9e-42,
Organism=Caenorhabditis elegans, GI193208177, Length=212, Percent_Identity=28.3018867924528, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17567265, Length=184, Percent_Identity=32.6086956521739, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=537, Percent_Identity=31.098696461825, Blast_Score=197, Evalue=5e-51,
Organism=Saccharomyces cerevisiae, GI6321121, Length=542, Percent_Identity=25.4612546125461, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6324314, Length=368, Percent_Identity=26.3586956521739, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6325030, Length=242, Percent_Identity=31.8181818181818, Blast_Score=110, Evalue=5e-25,
Organism=Saccharomyces cerevisiae, GI6323278, Length=237, Percent_Identity=29.957805907173, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24642252, Length=549, Percent_Identity=29.143897996357, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI18859989, Length=549, Percent_Identity=29.143897996357, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24666836, Length=530, Percent_Identity=28.6792452830189, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24641342, Length=534, Percent_Identity=28.0898876404494, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24648314, Length=185, Percent_Identity=32.972972972973, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24666092, Length=200, Percent_Identity=30, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24648279, Length=187, Percent_Identity=28.8770053475936, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI161078426, Length=187, Percent_Identity=28.8770053475936, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI45550390, Length=187, Percent_Identity=25.1336898395722, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61649; Mature: 61518

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQYVMSMLRVSKIVPPKRQIIKDISLSFFPGAKIGLLGLNGAGKSTVLKIMAGVEKEYD
CHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCC
GEVQWQPNLNIGYLPQEPQLDPEKTVREEVESGMGEVMGAQKRLEEVYAAYADPDADFDA
CCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAEEQAKLEAIIAAGANDNVEHQLEIAADALRLPPWDAKIGPLSGGEKRRVALCKLLLSK
HHHHHHHEEEHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGEGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCC
KGNYSGWLEQKEARLAQEAKGEAARQKAMKQELEWVRQNPKGRQAKSKARIARFEELSSF
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ETQKRNETQEIFIPVAERLGNEVIEFEGVSKGFGDRLLIDNLSFKAPPGAIVGIIGPNGA
HHHHCCCCHHEEEEHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCC
GKSTLFKMIAGKEQPDSGTVKIGQTVQMAFVEQSREGLDGDKTVFEDVAAGADILTVGKF
CHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCC
EMSSRAYLGRFNFKGADQQKKVGMLSGGERGRLHLAKTLLKGGNVLLLDEPSNDLDVETL
CCCCCCEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEDALLEYAGTVFVISHDRWFLDRIATHILAAEGESQWTFFDGNYQEYEADKKKRLGE
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH
EGAKPKRIRYKPISR
CCCCCCEECCCCCCC
>Mature Secondary Structure 
AQYVMSMLRVSKIVPPKRQIIKDISLSFFPGAKIGLLGLNGAGKSTVLKIMAGVEKEYD
HHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCC
GEVQWQPNLNIGYLPQEPQLDPEKTVREEVESGMGEVMGAQKRLEEVYAAYADPDADFDA
CCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAEEQAKLEAIIAAGANDNVEHQLEIAADALRLPPWDAKIGPLSGGEKRRVALCKLLLSK
HHHHHHHEEEHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGEGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCC
KGNYSGWLEQKEARLAQEAKGEAARQKAMKQELEWVRQNPKGRQAKSKARIARFEELSSF
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ETQKRNETQEIFIPVAERLGNEVIEFEGVSKGFGDRLLIDNLSFKAPPGAIVGIIGPNGA
HHHHCCCCHHEEEEHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCC
GKSTLFKMIAGKEQPDSGTVKIGQTVQMAFVEQSREGLDGDKTVFEDVAAGADILTVGKF
CHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCC
EMSSRAYLGRFNFKGADQQKKVGMLSGGERGRLHLAKTLLKGGNVLLLDEPSNDLDVETL
CCCCCCEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEDALLEYAGTVFVISHDRWFLDRIATHILAAEGESQWTFFDGNYQEYEADKKKRLGE
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH
EGAKPKRIRYKPISR
CCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]