Click here to switch to the map view.

The map label for this gene is ycgF [C]

Identifier: 34498814

GI number: 34498814

Start: 3655444

End: 3655869

Strand: Direct

Name: ycgF [C]

Synonym: CV_3359

Alternate gene names: 34498814

Gene position: 3655444-3655869 (Clockwise)

Preceding gene: 34498813

Following gene: 34498815

Centisome position: 76.94

GC content: 61.27

Gene sequence:

>426_bases
ATGGCCCTGCAGCATCTGATCTATGTCAGCACCGCCCGCCGGGAATTGGACAACGCGGATCTGGAAGCCCTGCTTGAATC
CTGCGTGCGCCACAACCTGCGGAACGACATCAGCGGCGTCCTGCTGTATGGCCCCGGCAACTTCATCCAGGTGCTGGAAG
GCGAAGCCGATGCCGTCGCCGAAACCTATCAGCGCATTCTGGACGATCCGCTCCACCACAATCTGATAGAAATCCTGCTC
GAAAACATCGAGCGGCGCAGCTTCGCCGACTGGCGAATGGGCTTCACCCGCCTCGACGACGAGACCATCCGCAAGCAGCC
GGGCTTCGTGGACATCTATGGTCCCGACTTCCAACCCAAACTGCTGGCGGAACGCCCCTCGCTGGCGATGAGCATGCTGC
TGACTTTCCGCGAGCACTGCCGCTGA

Upstream 100 bases:

>100_bases
CCATGCGGATGGCCGGCGCGGCCATCCCGGCGGCGGCGCGCAGATTTTGCTATGCTGTTGCGATCGATAGCGCCCGCCCC
TTCAGCCGAGGACATCCGCC

Downstream 100 bases:

>100_bases
CCGCCATCCGCTCATCCCGGCCGCAGGATGGGCGCGGATTTCGTTATAATCGACGCTTAGTCCCATCCAACCAATGTGAA
CGCACTCATGGCCCAATACG

Product: hypothetical protein

Products: NA

Alternate protein names: Sensors Of Blue-Light Using FAD Family; Bluf Domain Protein; BLUF Domain Protein; Sensors Of Blue-Light Using FAD

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MALQHLIYVSTARRELDNADLEALLESCVRHNLRNDISGVLLYGPGNFIQVLEGEADAVAETYQRILDDPLHHNLIEILL
ENIERRSFADWRMGFTRLDDETIRKQPGFVDIYGPDFQPKLLAERPSLAMSMLLTFREHCR

Sequences:

>Translated_141_residues
MALQHLIYVSTARRELDNADLEALLESCVRHNLRNDISGVLLYGPGNFIQVLEGEADAVAETYQRILDDPLHHNLIEILL
ENIERRSFADWRMGFTRLDDETIRKQPGFVDIYGPDFQPKLLAERPSLAMSMLLTFREHCR
>Mature_140_residues
ALQHLIYVSTARRELDNADLEALLESCVRHNLRNDISGVLLYGPGNFIQVLEGEADAVAETYQRILDDPLHHNLIEILLE
NIERRSFADWRMGFTRLDDETIRKQPGFVDIYGPDFQPKLLAERPSLAMSMLLTFREHCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16295; Mature: 16164

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQHLIYVSTARRELDNADLEALLESCVRHNLRNDISGVLLYGPGNFIQVLEGEADAVA
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHH
ETYQRILDDPLHHNLIEILLENIERRSFADWRMGFTRLDDETIRKQPGFVDIYGPDFQPK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHCCCCEEEEECCCCCCH
LLAERPSLAMSMLLTFREHCR
HHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALQHLIYVSTARRELDNADLEALLESCVRHNLRNDISGVLLYGPGNFIQVLEGEADAVA
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHH
ETYQRILDDPLHHNLIEILLENIERRSFADWRMGFTRLDDETIRKQPGFVDIYGPDFQPK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHCCCCEEEEECCCCCCH
LLAERPSLAMSMLLTFREHCR
HHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA