| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498680
Identifier: 34498680
GI number: 34498680
Start: 3507346
End: 3508122
Strand: Direct
Name: 34498680
Synonym: CV_3225
Alternate gene names: NA
Gene position: 3507346-3508122 (Clockwise)
Preceding gene: 34498679
Following gene: 34498681
Centisome position: 73.82
GC content: 69.37
Gene sequence:
>777_bases ATGAACGGCGCCTATCTGCTGACCGGACAGGTGATGCACCACCGCCTGCGCCCGGCCGCCAACCGTTTTGTCTACCCAGT GTTCTGCCTGCGCCTGAAGCTGTCGGCGCTGGAGGAGGCGAACGGCTTCTGGCTCGGCGTCGACCGCTGGCGGCCGCTGG CGCTGCGCACGCGCGACTATGGCCCGCGCGACGGCTCGCCGCTGCTGCCGTGGGCCCGCGCGCGGCTGGCGGAAGCCGGG CTGCCGGCCGACGGCGAAATCTGGCTGCAAACCTTTCCGCGCGTGTTCGGCTATGCCTTCAACCCGGTCAGCTTCTGGTA TTGCCACGATGCGGCCGGCCGCTTGATCGCGGTGCTGGCCGAGGTGAACAACACCTTCGGCGAGCATCACGGCTATCTGC TCAGTCCGTCCCAGGGCGGCGAGATCAGCGCCTCCAGCCAGCTCGCCTGCCGCAAGCTGCTGCACGTTTCGCCGTTTTGC CGCGTGGAAGGCCATTACCGTTTCCGCTTCGCCGAACAGCCGGGCCGCGCGCTGGTGCGCATCGACTATCACGACGCCGC GGGCGCCTTGCTGCACACCTCGATAGCCGGCCGCCTGCGCGCCTTGACAGCGCCGGCGGCGGCGGCCGCCTTGTTGCGCC AGCCCTTGCTGACCCTGGGCGTCATCGCCCGCATCCACTGGCAGGCGTTGAAGCTGTGGCTGAAACGCGTGCCCATCTTC CGCAAACCCCATCCCCCCGCCGCCGCGCTCAGCCGCGGCCAGGAGTTGAAGCCATGA
Upstream 100 bases:
>100_bases GCGCCTGGACCGGCTACGGCTTCCACGAGGACGGGCTGAAGTCCGCGCTGCGGGTGGCGCAGGCGTTTGGCCTGGCTCCG GCCTGGGCGAGGGTGGAAAG
Downstream 100 bases:
>100_bases GCGCGAGCCAACCCATCGCCTTGTCCCGTCCCGATATTCCCGCCGCCGGGCGGGCGCTGCAGGCCCTGTTGTCGAAACTG CGCCACGGCAGCCTCAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MNGAYLLTGQVMHHRLRPAANRFVYPVFCLRLKLSALEEANGFWLGVDRWRPLALRTRDYGPRDGSPLLPWARARLAEAG LPADGEIWLQTFPRVFGYAFNPVSFWYCHDAAGRLIAVLAEVNNTFGEHHGYLLSPSQGGEISASSQLACRKLLHVSPFC RVEGHYRFRFAEQPGRALVRIDYHDAAGALLHTSIAGRLRALTAPAAAAALLRQPLLTLGVIARIHWQALKLWLKRVPIF RKPHPPAAALSRGQELKP
Sequences:
>Translated_258_residues MNGAYLLTGQVMHHRLRPAANRFVYPVFCLRLKLSALEEANGFWLGVDRWRPLALRTRDYGPRDGSPLLPWARARLAEAG LPADGEIWLQTFPRVFGYAFNPVSFWYCHDAAGRLIAVLAEVNNTFGEHHGYLLSPSQGGEISASSQLACRKLLHVSPFC RVEGHYRFRFAEQPGRALVRIDYHDAAGALLHTSIAGRLRALTAPAAAAALLRQPLLTLGVIARIHWQALKLWLKRVPIF RKPHPPAAALSRGQELKP >Mature_258_residues MNGAYLLTGQVMHHRLRPAANRFVYPVFCLRLKLSALEEANGFWLGVDRWRPLALRTRDYGPRDGSPLLPWARARLAEAG LPADGEIWLQTFPRVFGYAFNPVSFWYCHDAAGRLIAVLAEVNNTFGEHHGYLLSPSQGGEISASSQLACRKLLHVSPFC RVEGHYRFRFAEQPGRALVRIDYHDAAGALLHTSIAGRLRALTAPAAAAALLRQPLLTLGVIARIHWQALKLWLKRVPIF RKPHPPAAALSRGQELKP
Specific function: Unknown
COG id: COG3496
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28805; Mature: 28805
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGAYLLTGQVMHHRLRPAANRFVYPVFCLRLKLSALEEANGFWLGVDRWRPLALRTRDY CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCC GPRDGSPLLPWARARLAEAGLPADGEIWLQTFPRVFGYAFNPVSFWYCHDAAGRLIAVLA CCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHH EVNNTFGEHHGYLLSPSQGGEISASSQLACRKLLHVSPFCRVEGHYRFRFAEQPGRALVR HHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCEEEE IDYHDAAGALLHTSIAGRLRALTAPAAAAALLRQPLLTLGVIARIHWQALKLWLKRVPIF EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RKPHPPAAALSRGQELKP CCCCCCHHHHHCCCCCCC >Mature Secondary Structure MNGAYLLTGQVMHHRLRPAANRFVYPVFCLRLKLSALEEANGFWLGVDRWRPLALRTRDY CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCC GPRDGSPLLPWARARLAEAGLPADGEIWLQTFPRVFGYAFNPVSFWYCHDAAGRLIAVLA CCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHH EVNNTFGEHHGYLLSPSQGGEISASSQLACRKLLHVSPFCRVEGHYRFRFAEQPGRALVR HHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCEEEE IDYHDAAGALLHTSIAGRLRALTAPAAAAALLRQPLLTLGVIARIHWQALKLWLKRVPIF EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RKPHPPAAALSRGQELKP CCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA