| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498679
Identifier: 34498679
GI number: 34498679
Start: 3506096
End: 3507349
Strand: Direct
Name: 34498679
Synonym: CV_3224
Alternate gene names: NA
Gene position: 3506096-3507349 (Clockwise)
Preceding gene: 34498677
Following gene: 34498680
Centisome position: 73.8
GC content: 69.06
Gene sequence:
>1254_bases GTGATAGGCAGCGGCATCGCCGGCCTTGCCACGGCCCACTTTCTCTCCCGGCGCCACGCGGTGACGCTGTTCGAAGCCGC CGACTATCTGGGCGGCCATACCCACACCGTCGATGTCACGGTCGACGGCCGCGACTTCGCCGTCGATACCGGCTTCCTGG TCTTCAACGATCGCACCTATCCCAATCTGATCGCCCTGTTCCAGGAGCTGGGCATCCCCAGCCATCCCAGCGACATGTCG TTCAGCGTCTCCCTGGGCCAGGGCCGGCTGGAATGGGCGGGACGCAATCTGGACAGCGTGTTCGTCCAGCGCGGCAATCT GCTGTCGCCCGGCTTCTGGGGCATGCTGTCCGACATCCTGCGCTTCAACCGCGAGGCGGAGCGCAATCTGCGCCGCGCGA TCGAGGCCCCGCAAAGCCTGGGGCACCTGCTGGACGCGGACGGATACGGCGCGCGCTTTCGCCGCCACTATCTGCTGCCG ATGGCGGCGGCGATCTGGTCCAGCCCCTGCCGCGACATCCTGTCCTTTCCGGCCGAGACTTTCCTGCGCTTCTGCCTGAA CCATGGCCTGCTGCAGCTGCGCGACCGGCCGCAGTGGCGCACCGTGCCGGGCGGCGCCCGGCAATATGTCGATAAAATCG CCGCCGGCCTGGCCGATGTCCGGCTGTCGACCCCGGTGCTGCGCGCCAGCCGCGTCGACGGCCGCCTGCGCCTGCTCACC GCCAGCAGCGAGGAAACCTTCGACGCGGCCGTGTTCGCGACCCATGCGCCGCAAACCCTGGGCATGCTGGCCGACGCGGG CGAGCTGGAACGCAGGATATTGTCCGCGGTCCGCTACCAGGCAAACGAAGCCGTTTTGCACACCGACGCCGCGCTCTTGC CCCGGCGCCAAGCCGCCTGGTCGGCCTGGAACTTCCTGGCGGACGAGCCGGACGACAGCCGGGCGGTGGGCGTCAGCTAT CTGCTCAACCAGCTGCAGCCGCTGCCTGTCGCCACGCCGGTGGTCGTGACTTTGAATCCGCCGCGTCCGCCCGATCCCGC CAAGGTGCTGGGCCGCTTCCGCTACCAACATCCTTTGCTCGACGCCGCCGCCATCGCCGCGCAAAAGGCCTTGCCCAGCA TCCAGGGCCGCCACGGCTGCTGGTTCGCCGGCGCCTGGACCGGCTACGGCTTCCACGAGGACGGGCTGAAGTCCGCGCTG CGGGTGGCGCAGGCGTTTGGCCTGGCTCCGGCCTGGGCGAGGGTGGAAAGATGA
Upstream 100 bases:
>100_bases TCCTGAATATAAAGCAGCGCCGGCGCACTGCCAAGCCGGTGGATTTCCGACCTCGCGACAGGACGACATGGTGAACGCCT CATCGCCACAACGCATCGCT
Downstream 100 bases:
>100_bases ACGGCGCCTATCTGCTGACCGGACAGGTGATGCACCACCGCCTGCGCCCGGCCGCCAACCGTTTTGTCTACCCAGTGTTC TGCCTGCGCCTGAAGCTGTC
Product: dehydrogenase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas; Lipoprotein
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MIGSGIAGLATAHFLSRRHAVTLFEAADYLGGHTHTVDVTVDGRDFAVDTGFLVFNDRTYPNLIALFQELGIPSHPSDMS FSVSLGQGRLEWAGRNLDSVFVQRGNLLSPGFWGMLSDILRFNREAERNLRRAIEAPQSLGHLLDADGYGARFRRHYLLP MAAAIWSSPCRDILSFPAETFLRFCLNHGLLQLRDRPQWRTVPGGARQYVDKIAAGLADVRLSTPVLRASRVDGRLRLLT ASSEETFDAAVFATHAPQTLGMLADAGELERRILSAVRYQANEAVLHTDAALLPRRQAAWSAWNFLADEPDDSRAVGVSY LLNQLQPLPVATPVVVTLNPPRPPDPAKVLGRFRYQHPLLDAAAIAAQKALPSIQGRHGCWFAGAWTGYGFHEDGLKSAL RVAQAFGLAPAWARVER
Sequences:
>Translated_417_residues MIGSGIAGLATAHFLSRRHAVTLFEAADYLGGHTHTVDVTVDGRDFAVDTGFLVFNDRTYPNLIALFQELGIPSHPSDMS FSVSLGQGRLEWAGRNLDSVFVQRGNLLSPGFWGMLSDILRFNREAERNLRRAIEAPQSLGHLLDADGYGARFRRHYLLP MAAAIWSSPCRDILSFPAETFLRFCLNHGLLQLRDRPQWRTVPGGARQYVDKIAAGLADVRLSTPVLRASRVDGRLRLLT ASSEETFDAAVFATHAPQTLGMLADAGELERRILSAVRYQANEAVLHTDAALLPRRQAAWSAWNFLADEPDDSRAVGVSY LLNQLQPLPVATPVVVTLNPPRPPDPAKVLGRFRYQHPLLDAAAIAAQKALPSIQGRHGCWFAGAWTGYGFHEDGLKSAL RVAQAFGLAPAWARVER >Mature_417_residues MIGSGIAGLATAHFLSRRHAVTLFEAADYLGGHTHTVDVTVDGRDFAVDTGFLVFNDRTYPNLIALFQELGIPSHPSDMS FSVSLGQGRLEWAGRNLDSVFVQRGNLLSPGFWGMLSDILRFNREAERNLRRAIEAPQSLGHLLDADGYGARFRRHYLLP MAAAIWSSPCRDILSFPAETFLRFCLNHGLLQLRDRPQWRTVPGGARQYVDKIAAGLADVRLSTPVLRASRVDGRLRLLT ASSEETFDAAVFATHAPQTLGMLADAGELERRILSAVRYQANEAVLHTDAALLPRRQAAWSAWNFLADEPDDSRAVGVSY LLNQLQPLPVATPVVVTLNPPRPPDPAKVLGRFRYQHPLLDAAAIAAQKALPSIQGRHGCWFAGAWTGYGFHEDGLKSAL RVAQAFGLAPAWARVER
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45859; Mature: 45859
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGSGIAGLATAHFLSRRHAVTLFEAADYLGGHTHTVDVTVDGRDFAVDTGFLVFNDRTY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCEEEECCCCC PNLIALFQELGIPSHPSDMSFSVSLGQGRLEWAGRNLDSVFVQRGNLLSPGFWGMLSDIL HHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHH RFNREAERNLRRAIEAPQSLGHLLDADGYGARFRRHYLLPMAAAIWSSPCRDILSFPAET HHCHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FLRFCLNHGLLQLRDRPQWRTVPGGARQYVDKIAAGLADVRLSTPVLRASRVDGRLRLLT HHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEE ASSEETFDAAVFATHAPQTLGMLADAGELERRILSAVRYQANEAVLHTDAALLPRRQAAW CCCCCCHHHHEEECCCCHHHHHHHCHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHH SAWNFLADEPDDSRAVGVSYLLNQLQPLPVATPVVVTLNPPRPPDPAKVLGRFRYQHPLL HHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHH DAAAIAAQKALPSIQGRHGCWFAGAWTGYGFHEDGLKSALRVAQAFGLAPAWARVER HHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure MIGSGIAGLATAHFLSRRHAVTLFEAADYLGGHTHTVDVTVDGRDFAVDTGFLVFNDRTY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCEEEECCCCC PNLIALFQELGIPSHPSDMSFSVSLGQGRLEWAGRNLDSVFVQRGNLLSPGFWGMLSDIL HHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHH RFNREAERNLRRAIEAPQSLGHLLDADGYGARFRRHYLLPMAAAIWSSPCRDILSFPAET HHCHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FLRFCLNHGLLQLRDRPQWRTVPGGARQYVDKIAAGLADVRLSTPVLRASRVDGRLRLLT HHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEE ASSEETFDAAVFATHAPQTLGMLADAGELERRILSAVRYQANEAVLHTDAALLPRRQAAW CCCCCCHHHHEEECCCCHHHHHHHCHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHH SAWNFLADEPDDSRAVGVSYLLNQLQPLPVATPVVVTLNPPRPPDPAKVLGRFRYQHPLL HHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHH DAAAIAAQKALPSIQGRHGCWFAGAWTGYGFHEDGLKSALRVAQAFGLAPAWARVER HHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA