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The map label for this gene is 34498624

Identifier: 34498624

GI number: 34498624

Start: 3453129

End: 3453647

Strand: Reverse

Name: 34498624

Synonym: CV_3169

Alternate gene names: NA

Gene position: 3453647-3453129 (Counterclockwise)

Preceding gene: 34498626

Following gene: 34498622

Centisome position: 72.69

GC content: 61.85

Gene sequence:

>519_bases
GTGTCAACGACGCAAGACTTGCCTAAGATCGTGTCCTCGCAGCATCTGGTTTCCGAGCGCAGTCCGGAGCTGTCCGAGTT
TGAATTCAGCCTGACGGTGGTCAACAACGCCTTCCATCGCTGGATGGTGCGTTGCATGTCGGCGGCGGGGGAGAAGGACA
TGACGCCGACCGAAGTGCTGCTGGTCCACCATGTCAATCATCGGGGGCGGCAGAAAAAGCTGGCCGACATCTGTTTCGTG
CTGAACATGGAGGATACCCACGTGGTGTCCTACGCGTTGAAGAAGCTGGTGAAGATGGGGTATGTGGCCAGCGAGAAAAG
CGGCAAGGAGGTGCTGTTTTCCACCACGGAAAGCGGCCGCCAGCTGTGCGAGCGCTACCGGCAGGTGCGCGAGCAGTGCC
TGATGTCCACGCTGGGCGACGGCGGCATCGCCAATCCTCTGATCGGGGACATCGCCCAGTTGATGCGGACGCTGGCCGGG
GTCTACGACCAGGCGGCCCGGGCCGGCGCCTCTTTCTGA

Upstream 100 bases:

>100_bases
GGGTTGGATGGTGGCGATGATGCAATGTCGAGAATTTCTCGTCAATTTATCGTTACCTGGATGCCGGCCACCTTTCCGTG
GCGCAATATGGAGAGAATGG

Downstream 100 bases:

>100_bases
GCGCCAGCCCTGGGCTGCGCTGCGGGGCCGTTGTTGCCGGCGCTGGCTTTGTCAAACGTCCCCGGCTGCGAATGACGCTG
CGGTAGGCCGTTGTTGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcription Regulator; MarR Family Regulatory Helix-Turn-Helix Protein; Transcription Regulator MarR-Type HTH Domain; Transcriptional Regulatory Protein

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSTTQDLPKIVSSQHLVSERSPELSEFEFSLTVVNNAFHRWMVRCMSAAGEKDMTPTEVLLVHHVNHRGRQKKLADICFV
LNMEDTHVVSYALKKLVKMGYVASEKSGKEVLFSTTESGRQLCERYRQVREQCLMSTLGDGGIANPLIGDIAQLMRTLAG
VYDQAARAGASF

Sequences:

>Translated_172_residues
MSTTQDLPKIVSSQHLVSERSPELSEFEFSLTVVNNAFHRWMVRCMSAAGEKDMTPTEVLLVHHVNHRGRQKKLADICFV
LNMEDTHVVSYALKKLVKMGYVASEKSGKEVLFSTTESGRQLCERYRQVREQCLMSTLGDGGIANPLIGDIAQLMRTLAG
VYDQAARAGASF
>Mature_171_residues
STTQDLPKIVSSQHLVSERSPELSEFEFSLTVVNNAFHRWMVRCMSAAGEKDMTPTEVLLVHHVNHRGRQKKLADICFVL
NMEDTHVVSYALKKLVKMGYVASEKSGKEVLFSTTESGRQLCERYRQVREQCLMSTLGDGGIANPLIGDIAQLMRTLAGV
YDQAARAGASF

Specific function: Unknown

COG id: COG5631

COG function: function code K; Predicted transcription regulator, contains HTH domain (MarR family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19180; Mature: 19049

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTQDLPKIVSSQHLVSERSPELSEFEFSLTVVNNAFHRWMVRCMSAAGEKDMTPTEVL
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LVHHVNHRGRQKKLADICFVLNMEDTHVVSYALKKLVKMGYVASEKSGKEVLFSTTESGR
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHH
QLCERYRQVREQCLMSTLGDGGIANPLIGDIAQLMRTLAGVYDQAARAGASF
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STTQDLPKIVSSQHLVSERSPELSEFEFSLTVVNNAFHRWMVRCMSAAGEKDMTPTEVL
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LVHHVNHRGRQKKLADICFVLNMEDTHVVSYALKKLVKMGYVASEKSGKEVLFSTTESGR
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHH
QLCERYRQVREQCLMSTLGDGGIANPLIGDIAQLMRTLAGVYDQAARAGASF
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA