| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is fliY [C]
Identifier: 34498622
GI number: 34498622
Start: 3451239
End: 3452030
Strand: Reverse
Name: fliY [C]
Synonym: CV_3167
Alternate gene names: 34498622
Gene position: 3452030-3451239 (Counterclockwise)
Preceding gene: 34498624
Following gene: 34498619
Centisome position: 72.66
GC content: 66.04
Gene sequence:
>792_bases ATGGTGCGGTTTATCGGGGGTTTTGCTTTACTGGCGTGCTGGGCTTTGCCGGCGATGGCGGGCGGGATATGCGGCAAGAC TATCCAGGTGGGCTGGGAGGAGAGGCCGCCGTATCATTATCAGGGACGGGATGGCCGGCCCGCGGGCTATTCGGTGGAGC TGCTGAACCAGGCGGCCGCGCGCGTTGGCTGCCGCCTGGCGTATCGCCGAATTCCCTGGTCGCGCACGCTGCAGGCGCTG GAGCTGGGCAAGGTGGATGCCGCGATGCAGGCGCTGAAAACGCCGGAACGGGAGGCGTACGCCTGTTTTGTGCCAGGCTA CAGTTCCTCGCTGGTGCGGCTGTGGGCGCGCGGCGATCGCGCTGCGCATTGGCCGGTTGCCCAGCAGCAGGACTTGGGCA AGCTGGGCGTCGTCAGGCTGGGGGTGACGCATGGCGACAGTTACGGCGACAAATGGGACCGTTGGCTGAAAGCGCCTCCC GGAACGGTGAAGGTGGACGCCGGGGAAACCCTGGCCGGCAGTTTGCGCAAGCTGCAGCTGGGGAGGATAGATCTGCTGCT GGCCACCATGGACACGGCGCCGAATGAACTGGCCCGCCTGCCGCAGCAGCCTGCGATCGTCGCCCTGCCGCCGGTATGGC CGATAGGCGGGGCCTTTTACGTTTTCAGCAAGCGCAGCGTGTCTCCTGAGTTGTGCCACGCTTTTGCCGCCGCGCTCAGC GACATGAAGCGCGACGGCGTGGTGGACCGGCTGTACCGCAGCCGCTTCAATATCGCGTATCCCGATCCCTAG
Upstream 100 bases:
>100_bases CTGGGTGGTCGTGTGCCTGCGCCCGCGGGACGCCATCGGCATGGGAATTCTATCCTACATTGTAGGGGAGCGCGCTTGCG CTTGCCGGTCGCGGGAGGGG
Downstream 100 bases:
>100_bases CCGCGCAGCAGGGGCAGCGGCGCGAAGCGTCCGCCCAGCACGTTATGGCTGTCCTTGCCCCACCAGCCGTCTATCGCCGT GGCGTAAACCTGGCGGAAGT
Product: amino acid ABC transporter substrarte-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MVRFIGGFALLACWALPAMAGGICGKTIQVGWEERPPYHYQGRDGRPAGYSVELLNQAAARVGCRLAYRRIPWSRTLQAL ELGKVDAAMQALKTPEREAYACFVPGYSSSLVRLWARGDRAAHWPVAQQQDLGKLGVVRLGVTHGDSYGDKWDRWLKAPP GTVKVDAGETLAGSLRKLQLGRIDLLLATMDTAPNELARLPQQPAIVALPPVWPIGGAFYVFSKRSVSPELCHAFAAALS DMKRDGVVDRLYRSRFNIAYPDP
Sequences:
>Translated_263_residues MVRFIGGFALLACWALPAMAGGICGKTIQVGWEERPPYHYQGRDGRPAGYSVELLNQAAARVGCRLAYRRIPWSRTLQAL ELGKVDAAMQALKTPEREAYACFVPGYSSSLVRLWARGDRAAHWPVAQQQDLGKLGVVRLGVTHGDSYGDKWDRWLKAPP GTVKVDAGETLAGSLRKLQLGRIDLLLATMDTAPNELARLPQQPAIVALPPVWPIGGAFYVFSKRSVSPELCHAFAAALS DMKRDGVVDRLYRSRFNIAYPDP >Mature_263_residues MVRFIGGFALLACWALPAMAGGICGKTIQVGWEERPPYHYQGRDGRPAGYSVELLNQAAARVGCRLAYRRIPWSRTLQAL ELGKVDAAMQALKTPEREAYACFVPGYSSSLVRLWARGDRAAHWPVAQQQDLGKLGVVRLGVTHGDSYGDKWDRWLKAPP GTVKVDAGETLAGSLRKLQLGRIDLLLATMDTAPNELARLPQQPAIVALPPVWPIGGAFYVFSKRSVSPELCHAFAAALS DMKRDGVVDRLYRSRFNIAYPDP
Specific function: Part Of A Binding-Protein-Dependent Transport System For Cystine. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28902; Mature: 28902
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRFIGGFALLACWALPAMAGGICGKTIQVGWEERPPYHYQGRDGRPAGYSVELLNQAAA CCEEHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH RVGCRLAYRRIPWSRTLQALELGKVDAAMQALKTPEREAYACFVPGYSSSLVRLWARGDR HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCC AAHWPVAQQQDLGKLGVVRLGVTHGDSYGDKWDRWLKAPPGTVKVDAGETLAGSLRKLQL CCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC GRIDLLLATMDTAPNELARLPQQPAIVALPPVWPIGGAFYVFSKRSVSPELCHAFAAALS CCEEEEEEECCCCHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHH DMKRDGVVDRLYRSRFNIAYPDP HHHHCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVRFIGGFALLACWALPAMAGGICGKTIQVGWEERPPYHYQGRDGRPAGYSVELLNQAAA CCEEHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH RVGCRLAYRRIPWSRTLQALELGKVDAAMQALKTPEREAYACFVPGYSSSLVRLWARGDR HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCC AAHWPVAQQQDLGKLGVVRLGVTHGDSYGDKWDRWLKAPPGTVKVDAGETLAGSLRKLQL CCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC GRIDLLLATMDTAPNELARLPQQPAIVALPPVWPIGGAFYVFSKRSVSPELCHAFAAALS CCEEEEEEECCCCHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHH DMKRDGVVDRLYRSRFNIAYPDP HHHHCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA